CN181560
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN181560 vs. ExPASy Swiss-Prot
Match: NUOF1_RHIME (NADH-quinone oxidoreductase subunit F 1 OS=Rhizobium meliloti GN=nuoF1 PE=3 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 1.446e-40 Identity = 74/100 (74.00%), Postives = 88/100 (88.00%), Query Frame = -3 Query: 335 VIVMDKSTDVVDAIARLSYFYKHESCGRCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEH 634 VIVMDKSTD++ AI RLS FYKHESCG+CTPCREGTGW+ +MER+ G A+ EIDML +VTKQ+EGHTICALGDAAAWP+QGLI+HFRPE+E+RI E+ Sbjct: 320 VIVMDKSTDIIKAIWRLSAFYKHESCGQCTPCREGTGWMMRVMERMVQGRAQKREIDMLFDVTKQVEGHTICALGDAAAWPIQGLIKHFRPEMEKRIDEY 419
BLAST of CN181560 vs. ExPASy Swiss-Prot
Match: NUOF_RICM5 (NADH-quinone oxidoreductase subunit F OS=Rickettsia massiliae (strain Mtu5) GN=nuoF PE=3 SV=1) HSP 1 Score: 165.622 bits (418), Expect = 1.888e-40 Identity = 75/101 (74.26%), Postives = 86/101 (85.15%), Query Frame = -3 Query: 332 VIVMDKSTDVVDAIARLSYFYKHESCGRCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHA 634 +IVMDKSTD++ AIARLS FY HESCG+CTPCREGTGW+W +M RL GNAK EID L VTK+IEGHTICALGDAAAWP+QGLIRHFR E+E RIK ++ Sbjct: 319 IIVMDKSTDIIYAIARLSKFYMHESCGQCTPCREGTGWMWRVMMRLVKGNAKKSEIDELLNVTKEIEGHTICALGDAAAWPIQGLIRHFRSEIEARIKSYS 419
BLAST of CN181560 vs. ExPASy Swiss-Prot
Match: NUOF_RICPR (NADH-quinone oxidoreductase subunit F OS=Rickettsia prowazekii GN=nuoF PE=3 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 2.466e-40 Identity = 75/98 (76.53%), Postives = 85/98 (86.73%), Query Frame = -3 Query: 341 VIVMDKSTDVVDAIARLSYFYKHESCGRCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIK 634 +IVMDKSTD++ AIARLS FY HESCG+CTPCREGTGW+W +M RL GNAK EID L VTK+IEGHTICALGDAAAWP+QGLIRHFR E+E+RIK Sbjct: 319 IIVMDKSTDIIYAIARLSKFYMHESCGQCTPCREGTGWMWRVMMRLVNGNAKKNEIDTLLNVTKEIEGHTICALGDAAAWPIQGLIRHFRDEIEQRIK 416
BLAST of CN181560 vs. ExPASy Swiss-Prot
Match: NUOF_RICAH (NADH-quinone oxidoreductase subunit F OS=Rickettsia akari (strain Hartford) GN=nuoF PE=3 SV=1) HSP 1 Score: 164.851 bits (416), Expect = 3.220e-40 Identity = 75/101 (74.26%), Postives = 86/101 (85.15%), Query Frame = -3 Query: 332 VIVMDKSTDVVDAIARLSYFYKHESCGRCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHA 634 +IVMDKSTD++ AIARLS FY HESCG+CTPCREGTGW+W +M RL GNAK EID L VTK+IEGHTICALGDAAAWP+QGLIRHFR E+E RIK ++ Sbjct: 319 IIVMDKSTDIIYAIARLSKFYMHESCGQCTPCREGTGWMWRVMIRLVKGNAKKSEIDELLNVTKEIEGHTICALGDAAAWPIQGLIRHFRSEIEDRIKSYS 419
BLAST of CN181560 vs. ExPASy Swiss-Prot
Match: NDUV1_DICDI (NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial OS=Dictyostelium discoideum GN=ndufv1 PE=2 SV=1) HSP 1 Score: 164.466 bits (415), Expect = 4.206e-40 Identity = 75/99 (75.76%), Postives = 88/99 (88.89%), Query Frame = -3 Query: 338 VIVMDKSTDVVDAIARLSYFYKHESCGRCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKE 634 VIVM+K TD++ AIARLS FYKHESCG+CTPCREG GWL+ I +RL GNAK +EID L+E+++QIEGHTICALGDAAAWPVQGLIRHFRPE+E RIK+ Sbjct: 371 VIVMNKETDMIAAIARLSKFYKHESCGQCTPCREGVGWLYDITDRLVTGNAKPDEIDSLEEISRQIEGHTICALGDAAAWPVQGLIRHFRPEIEDRIKQ 469
BLAST of CN181560 vs. ExPASy Swiss-Prot
Match: NUOF_RHOCA (NADH-quinone oxidoreductase subunit F OS=Rhodobacter capsulatus GN=nuoF PE=3 SV=1) HSP 1 Score: 164.081 bits (414), Expect = 5.493e-40 Identity = 72/98 (73.47%), Postives = 86/98 (87.76%), Query Frame = -3 Query: 341 VIVMDKSTDVVDAIARLSYFYKHESCGRCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIK 634 +IVMD+ TD++ AIARLS F+KHESCG+CTPCREGT W+W +MERL G A++EEIDML VTKQ+EGHTICALGDAAAWP+QGLIRH+R E+E RIK Sbjct: 321 LIVMDQQTDIIKAIARLSKFFKHESCGQCTPCREGTSWMWRVMERLVTGEAEVEEIDMLFSVTKQVEGHTICALGDAAAWPIQGLIRHYREEIEDRIK 418
BLAST of CN181560 vs. ExPASy Swiss-Prot
Match: NUOF_RICFE (NADH-quinone oxidoreductase subunit F OS=Rickettsia felis GN=nuoF PE=3 SV=1) HSP 1 Score: 163.31 bits (412), Expect = 9.370e-40 Identity = 74/98 (75.51%), Postives = 84/98 (85.71%), Query Frame = -3 Query: 341 VIVMDKSTDVVDAIARLSYFYKHESCGRCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIK 634 +IVMDKSTD++ AIARLS FY HESCG+CTPCREGTGW+W +M RL GNA+ EID L VTK+IEGHTICALGDAAAWP+QGLIRHFR E+E RIK Sbjct: 319 IIVMDKSTDIIYAIARLSKFYMHESCGQCTPCREGTGWMWRVMMRLVKGNAQKSEIDELLNVTKEIEGHTICALGDAAAWPIQGLIRHFRSEIEERIK 416
BLAST of CN181560 vs. ExPASy Swiss-Prot
Match: NDUV1_ASPNG (NADH-ubiquinone oxidoreductase 51 kDa subunit, mitochondrial OS=Aspergillus niger GN=NUO51 PE=3 SV=1) HSP 1 Score: 162.54 bits (410), Expect = 1.598e-39 Identity = 73/102 (71.57%), Postives = 90/102 (88.24%), Query Frame = -3 Query: 329 VIVMDKSTDVVDAIARLSYFYKHESCGRCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHAE 634 VIVMDKSTD+V AI+RLS FYKHESCG+CTPCREG+ W +M+R++ G A+ EIDMLQE+TKQ+EGHTICALG+A AWP+QGLIRHFRPELE RI+E+++ Sbjct: 368 VIVMDKSTDIVRAISRLSTFYKHESCGQCTPCREGSKWTMHMMQRMEKGQAREREIDMLQELTKQVEGHTICALGEAFAWPIQGLIRHFRPELEARIREYSK 469
BLAST of CN181560 vs. ExPASy Swiss-Prot
Match: NUOF_RICBR (NADH-quinone oxidoreductase subunit F OS=Rickettsia bellii (strain RML369-C) GN=nuoF PE=3 SV=1) HSP 1 Score: 162.155 bits (409), Expect = 2.087e-39 Identity = 73/98 (74.49%), Postives = 85/98 (86.73%), Query Frame = -3 Query: 341 VIVMDKSTDVVDAIARLSYFYKHESCGRCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIK 634 +IVMDKSTD++ AIARLS FY HESCG+CTPCREGTGW+W +M RL G+AK EID L EVTK+IEGHTICALGDAAAWP+QGLI+HFR E+E RI+ Sbjct: 320 IIVMDKSTDIIYAIARLSKFYMHESCGQCTPCREGTGWMWRVMMRLVKGDAKKSEIDQLLEVTKEIEGHTICALGDAAAWPIQGLIKHFRNEIESRIQ 417
BLAST of CN181560 vs. ExPASy Swiss-Prot
Match: NUOF_RICB8 (NADH-quinone oxidoreductase subunit F OS=Rickettsia bellii (strain OSU 85-389) GN=nuoF PE=3 SV=1) HSP 1 Score: 162.155 bits (409), Expect = 2.087e-39 Identity = 73/98 (74.49%), Postives = 85/98 (86.73%), Query Frame = -3 Query: 341 VIVMDKSTDVVDAIARLSYFYKHESCGRCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIK 634 +IVMDKSTD++ AIARLS FY HESCG+CTPCREGTGW+W +M RL G+AK EID L EVTK+IEGHTICALGDAAAWP+QGLI+HFR E+E RI+ Sbjct: 320 IIVMDKSTDIIYAIARLSKFYMHESCGQCTPCREGTGWMWRVMMRLVKGDAKKSEIDQLLEVTKEIEGHTICALGDAAAWPIQGLIKHFRNEIESRIQ 417 The following BLAST results are available for this feature:
BLAST of CN181560 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 34
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Sequences
The
following sequences are available for this feature:
EST sequence >CN181560 ID=CN181560; Name=CN181560; organism=Citrus sinensis; type=EST; length=636bpback to top |