CN188541
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN188541 vs. ExPASy Swiss-Prot
Match: RL31_PERFR (60S ribosomal protein L31 OS=Perilla frutescens GN=RPL31 PE=2 SV=1) HSP 1 Score: 176.022 bits (445), Expect = 1.261e-43 Identity = 90/121 (74.38%), Postives = 96/121 (79.34%), Query Frame = -1 Query: 193 MVEKAGKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRKFAQKAMGTTDVRVDVKLNKQVWSXXXXXXXXXXXXXXXXXRNDEEDAKEEFYSLVTVAEIPPEGLKGLGTKVIDEED 555 M +K K RKEEVV+REYTINLHKRLHGCTFKKKAPKAIKEIRKFAQKAMGTTDVRVDVKLNK +WS RND+EDAKEE YSLVTVAEIP GLKGLGT+VIDEE+ Sbjct: 1 MADKGSKPRKEEVVSREYTINLHKRLHGCTFKKKAPKAIKEIRKFAQKAMGTTDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPEGGLKGLGTQVIDEEE 121
BLAST of CN188541 vs. ExPASy Swiss-Prot
Match: RL313_ARATH (60S ribosomal protein L31-3 OS=Arabidopsis thaliana GN=RPL31C PE=2 SV=2) HSP 1 Score: 172.94 bits (437), Expect = 1.068e-42 Identity = 87/115 (75.65%), Postives = 94/115 (81.74%), Query Frame = -1 Query: 193 KGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRKFAQKAMGTTDVRVDVKLNKQVWSXXXXXXXXXXXXXXXXXRNDEEDAKEEFYSLVTVAEIPPEGLKGLGTKVIDEED 537 KGRKEEV+TREYTINLH+RLH CTFKKKAPKAIKEIRKFA+KAMGT DVRVDVKLNKQ+WS RND+EDAKEEF+SLVTVAEIP EGL GLGTKVI+EED Sbjct: 5 KGRKEEVITREYTINLHRRLHKCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKQIWSKGIRGPPRRIRVRVARKRNDDEDAKEEFFSLVTVAEIPAEGLSGLGTKVIEEED 119
BLAST of CN188541 vs. ExPASy Swiss-Prot
Match: RL31_PICMA (60S ribosomal protein L31 OS=Picea mariana GN=RPL31 PE=2 SV=1) HSP 1 Score: 172.555 bits (436), Expect = 1.394e-42 Identity = 87/121 (71.90%), Postives = 96/121 (79.34%), Query Frame = -1 Query: 193 MVEKAGKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRKFAQKAMGTTDVRVDVKLNKQVWSXXXXXXXXXXXXXXXXXRNDEEDAKEEFYSLVTVAEIPPEGLKGLGTKVIDEED 555 MVEK GK R+ EV TREYTINLH+RLHGCTFKK APKA+KEIRKFAQKAMGTTDVR+DVKLNK VWS RNDEEDAK+E YS+VTVAE+PPEGL GLGTK+I+EED Sbjct: 1 MVEK-GKSRRNEVATREYTINLHRRLHGCTFKKMAPKAVKEIRKFAQKAMGTTDVRLDVKLNKAVWSRGIRSVPRRMRVRISRKRNDEEDAKDELYSIVTVAEVPPEGLTGLGTKIIEEED 120
BLAST of CN188541 vs. ExPASy Swiss-Prot
Match: RL31_NICGU (60S ribosomal protein L31 OS=Nicotiana glutinosa GN=RPL31 PE=2 SV=1) HSP 1 Score: 172.17 bits (435), Expect = 1.821e-42 Identity = 87/115 (75.65%), Postives = 93/115 (80.87%), Query Frame = -1 Query: 193 KGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRKFAQKAMGTTDVRVDVKLNKQVWSXXXXXXXXXXXXXXXXXRNDEEDAKEEFYSLVTVAEIPPEGLKGLGTKVIDEED 537 KGRKEEVVTREYTINLHKRLH CTFKKKAP AIKEIRKFAQKAMGT DVRVDVKLNKQ+WS RND+EDAKEE YSLVTVAEIP +GLKGLGTK+I++ED Sbjct: 6 KGRKEEVVTREYTINLHKRLHSCTFKKKAPTAIKEIRKFAQKAMGTKDVRVDVKLNKQIWSRGIRSVPRRVRVRIARKRNDDEDAKEELYSLVTVAEIPAKGLKGLGTKIIEDED 120
BLAST of CN188541 vs. ExPASy Swiss-Prot
Match: RL312_ARATH (60S ribosomal protein L31-2 OS=Arabidopsis thaliana GN=RPL31B PE=2 SV=1) HSP 1 Score: 171.785 bits (434), Expect = 2.378e-42 Identity = 86/115 (74.78%), Postives = 93/115 (80.87%), Query Frame = -1 Query: 193 KGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRKFAQKAMGTTDVRVDVKLNKQVWSXXXXXXXXXXXXXXXXXRNDEEDAKEEFYSLVTVAEIPPEGLKGLGTKVIDEED 537 KGRKEEVVTREYTINLH+RLH CTFKKKAPKAIKEIRKFA+K MGT DVRVDVKLNKQ+WS RND+EDAKEEF+SLVTVAEIP EGL GLGTK+I+EED Sbjct: 5 KGRKEEVVTREYTINLHRRLHSCTFKKKAPKAIKEIRKFAEKEMGTKDVRVDVKLNKQIWSKGIRGPPRRIRVRVARKRNDDEDAKEEFFSLVTVAEIPAEGLSGLGTKIIEEED 119
BLAST of CN188541 vs. ExPASy Swiss-Prot
Match: RL311_ARATH (60S ribosomal protein L31-1 OS=Arabidopsis thaliana GN=RPL31A PE=2 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 3.106e-42 Identity = 87/116 (75.00%), Postives = 93/116 (80.17%), Query Frame = -1 Query: 193 GKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRKFAQKAMGTTDVRVDVKLNKQVWSXXXXXXXXXXXXXXXXXRNDEEDAKEEFYSLVTVAEIPPEGLKGLGTKVIDEED 540 GKGRKEEVVTREYTINLH+RLH CTFKKKAP AIKEIRKFA KAMGT DVRVDVKLNKQ+WS RND+EDAKEEF+SLVTVAEIP EGL GLGTKVI+EE+ Sbjct: 4 GKGRKEEVVTREYTINLHRRLHSCTFKKKAPNAIKEIRKFALKAMGTKDVRVDVKLNKQIWSKGIRGPPRRIRVRVARKRNDDEDAKEEFFSLVTVAEIPAEGLSGLGTKVIEEEE 119
BLAST of CN188541 vs. ExPASy Swiss-Prot
Match: RL31_PANGI (60S ribosomal protein L31 OS=Panax ginseng GN=RPL31 PE=2 SV=1) HSP 1 Score: 167.933 bits (424), Expect = 3.434e-41 Identity = 88/121 (72.73%), Postives = 95/121 (78.51%), Query Frame = -1 Query: 193 MVEKAGKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRKFAQKAMGTTDVRVDVKLNKQVWSXXXXXXXXXXXXXXXXXRNDEEDAKEEFYSLVTVAEIPPEGLKGLGTKVIDEED 555 MVEK KGRKEEVVTREYTINLHKRLHGCTFKKKAP AIKEIRKFAQKAMGT DVRVDVKLNKQ+WS RND+EDAKEE YSLVTVA+IP LKGLG ++I+E+D Sbjct: 1 MVEKT-KGRKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTKDVRVDVKLNKQIWSRGIRSVPRRVRVRIARKRNDDEDAKEELYSLVTVAKIPAGTLKGLGPQIIEEDD 120
BLAST of CN188541 vs. ExPASy Swiss-Prot
Match: RL31_CYAPA (60S ribosomal protein L31 OS=Cyanophora paradoxa GN=RPL31 PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 1.655e-27 Identity = 64/114 (56.14%), Postives = 77/114 (67.54%), Query Frame = -1 Query: 196 KGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRKFAQKAMGTTDVRVDVKLNKQVWSXXXXXXXXXXXXXXXXXRNDEEDAKEEFYSLVTVAEIPPEGLKGLGTKVIDEE 537 K R E+VTREYTINLHKRLHG FKK+AP+A+KEI+KFA K MGTTDVRVD +LNK VW+ RND+EDAKE+ Y+LVT +P KGL T+ +D E Sbjct: 8 KSRAAEIVTREYTINLHKRLHGVGFKKRAPRAVKEIKKFASKIMGTTDVRVDPRLNKFVWNQGIRSVPYRVRVRLARKRNDDEDAKEKLYTLVTY--VPVTSFKGLQTQNVDAE 119
BLAST of CN188541 vs. ExPASy Swiss-Prot
Match: RL31_CHLRE (60S ribosomal protein L31 OS=Chlamydomonas reinhardtii GN=RPL31 PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 4.814e-27 Identity = 66/113 (58.41%), Postives = 76/113 (67.26%), Query Frame = -1 Query: 199 KGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRKFAQKAMGTTDVRVDVKLNKQVWSXXXXXXXXXXXXXXXXXRNDEEDAKEEFYSLVTVAEIPPEGLKGLGTKVIDE 537 K R +E VTREYTI+L KRLH +FKK APKA+KEIRKFA K MGT+DVR+DVKLNK VWS RND+EDAKEE YS VTVAE + KG GT V+ + Sbjct: 5 KSRSKEQVTREYTIHLSKRLHKTSFKKCAPKAVKEIRKFASKVMGTSDVRLDVKLNKAVWSKGIKNVPTRLRIVISRRRNDDEDAKEEMYSFVTVAE--DQSTKGKGTVVVQD 115
BLAST of CN188541 vs. ExPASy Swiss-Prot
Match: RL31_SPOFR (60S ribosomal protein L31 OS=Spodoptera frugiperda GN=RpL31 PE=2 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 5.323e-26 Identity = 61/116 (52.59%), Postives = 77/116 (66.38%), Query Frame = -1 Query: 202 EKAGKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRKFAQKAMGTTDVRVDVKLNKQVWSXXXXXXXXXXXXXXXXXRNDEEDAKEEFYSLVTVAEIPPEGLKGLGTKVID 549 E+ GK EVVTREYT+NLHKRLHG FKK+AP+AIKEIRKFA+K MGT DVRVD +LNK +WS RND+ED+ + ++LVT +P +KGL T+ +D Sbjct: 7 ERKGKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDVRVDTRLNKFLWSKGVRNVPFRVRVRLSRRRNDDEDSAHKLFTLVTY--VPVASIKGLQTENVD 120 The following BLAST results are available for this feature:
BLAST of CN188541 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 31
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CN188541 ID=CN188541; Name=CN188541; organism=Citrus sinensis; type=EST; length=600bpback to top |