CN188416
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN188416 vs. ExPASy Swiss-Prot
Match: SEC13_RAT (Protein SEC13 homolog OS=Rattus norvegicus GN=Sec13 PE=1 SV=1) HSP 1 Score: 191.43 bits (485), Expect = 2.955e-48 Identity = 86/154 (55.84%), Postives = 108/154 (70.13%), Query Frame = 1 Query: 199 IETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVFMGP 660 ++T HED +HD MD+YG RLAT SSD S+KI + N +A L+GH GPVWQVAWAHP +G+ILASCSYD +VIIWKE N W + H + H SSVNS+ WAPH+ GL LACGSSDG IS+ T T +G W+ +I+ AH +G +V P Sbjct: 8 VDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWKEEN-GTWEKTHEHSGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAP 160 HSP 2 Score: 21.9422 bits (45), Expect = 2.955e-48 Identity = 7/10 (70.00%), Postives = 9/10 (90.00%), Query Frame = 2 Query: 650 SWAPAMAPGA 679 SWAPA+ PG+ Sbjct: 157 SWAPAVVPGS 166
BLAST of CN188416 vs. ExPASy Swiss-Prot
Match: SEC13_MOUSE (Protein SEC13 homolog OS=Mus musculus GN=Sec13 PE=2 SV=3) HSP 1 Score: 191.43 bits (485), Expect = 2.955e-48 Identity = 86/154 (55.84%), Postives = 108/154 (70.13%), Query Frame = 1 Query: 199 IETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVFMGP 660 ++T HED +HD MD+YG RLAT SSD S+KI + N +A L+GH GPVWQVAWAHP +G+ILASCSYD +VIIWKE N W + H + H SSVNS+ WAPH+ GL LACGSSDG IS+ T T +G W+ +I+ AH +G +V P Sbjct: 8 VDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWKEEN-GTWEKTHEHSGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAP 160 HSP 2 Score: 21.9422 bits (45), Expect = 2.955e-48 Identity = 7/10 (70.00%), Postives = 9/10 (90.00%), Query Frame = 2 Query: 650 SWAPAMAPGA 679 SWAPA+ PG+ Sbjct: 157 SWAPAVVPGS 166
BLAST of CN188416 vs. ExPASy Swiss-Prot
Match: SEC13_HUMAN (Protein SEC13 homolog OS=Homo sapiens GN=SEC13 PE=1 SV=3) HSP 1 Score: 189.504 bits (480), Expect = 1.111e-47 Identity = 85/154 (55.19%), Postives = 108/154 (70.13%), Query Frame = 1 Query: 199 IETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVFMGP 660 ++T HED +HD MD+YG RLAT SSD S+KI + N +A L+GH GPVWQVAWAHP +G+ILASCSYD +VIIW+E N W ++H H SSVNS+ WAPH+ GL LACGSSDG IS+ T T +G W+ +I+ AH +G +V P Sbjct: 8 VDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREEN-GTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAP 160 HSP 2 Score: 21.9422 bits (45), Expect = 1.111e-47 Identity = 7/10 (70.00%), Postives = 9/10 (90.00%), Query Frame = 2 Query: 650 SWAPAMAPGA 679 SWAPA+ PG+ Sbjct: 157 SWAPAVVPGS 166
BLAST of CN188416 vs. ExPASy Swiss-Prot
Match: SEC13_BOVIN (Protein SEC13 homolog OS=Bos taurus GN=SEC13 PE=2 SV=1) HSP 1 Score: 188.348 bits (477), Expect = 2.461e-47 Identity = 86/154 (55.84%), Postives = 106/154 (68.83%), Query Frame = 1 Query: 199 IETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVFMGP 660 ++T HED +HD MD+YG RLAT SSD S+KI + N +A L+GH GPVWQVAWAHP +G+ILASCSYD +VIIWKE N W + H H SSVNS+ WAPH+ GL LACGSSDG IS+ T T G W+ +I+ AH +G +V P Sbjct: 8 VDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILVADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWKEEN-GTWEKTHEHTGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGLGQWEVKKINNAHTIGCNAVSWAP 160 HSP 2 Score: 21.9422 bits (45), Expect = 2.461e-47 Identity = 7/10 (70.00%), Postives = 9/10 (90.00%), Query Frame = 2 Query: 650 SWAPAMAPGA 679 SWAPA+ PG+ Sbjct: 157 SWAPAVVPGS 166
BLAST of CN188416 vs. ExPASy Swiss-Prot
Match: SEC13_DICDI (Protein transport protein SEC13 OS=Dictyostelium discoideum GN=sec13 PE=3 SV=1) HSP 1 Score: 183.341 bits (464), Expect = 9.945e-46 Identity = 85/159 (53.46%), Postives = 105/159 (66.04%), Query Frame = 1 Query: 184 MPAQKIETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVFMGP 660 M Q +++GHED VHD D+YGK LAT SSD IKI + QHL L+GH GPVWQVAWAHPKFG ILAS SYD +VI+WKE N W+ H + H+ SVNSI+WAPHE GLSLAC SSDG++++ + W+ + Q +GV SV P Sbjct: 1 MATQNVDSGHEDMVHDAQFDYYGKFLATCSSDKMIKIFDVGGENPQHLVDLRGHEGPVWQVAWAHPKFGKILASASYDRKVIVWKEVGNNSWSIIHQYAGHELSVNSISWAPHEFGLSLACASSDGSVTIHNYN-NNVWEAPQKIQVSQIGVNSVSWSP 158
BLAST of CN188416 vs. ExPASy Swiss-Prot
Match: SEC13_USTMA (Protein transport protein SEC13 OS=Ustilago maydis GN=SEC13 PE=3 SV=1) HSP 1 Score: 176.022 bits (445), Expect = 1.178e-43 Identity = 92/180 (51.11%), Postives = 110/180 (61.11%), Query Frame = 1 Query: 193 QKIETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLA-TLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKE-------------GNQN----------DWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVFMGP 660 + IET HED VHD +DFYGKRLAT SSD ++K+ + N A TL GH+GPVWQVAWAHP FG ILASCSYDG+V+IWK+ G+Q+ WT+ H +SVNSI+WAPHELG LAC SSDGN+SV T DG W + AHPVG +V P Sbjct: 19 KNIETQHEDMVHDAQLDFYGKRLATCSSDRTVKVFDIVNGTPSTTAETLHGHQGPVWQVAWAHPTFGDILASCSYDGKVVIWKDNGAGASIGASAPYGSQSAYGAPTSSAGGWTKIKEHTLHTASVNSISWAPHELGSILACASSDGNVSVLTFNNDGTWAVDLV-AAHPVGCNAVSWAP 197 HSP 2 Score: 21.9422 bits (45), Expect = 1.178e-43 Identity = 7/10 (70.00%), Postives = 9/10 (90.00%), Query Frame = 2 Query: 650 SWAPAMAPGA 679 SWAPA+ PG+ Sbjct: 194 SWAPAVVPGS 203
BLAST of CN188416 vs. ExPASy Swiss-Prot
Match: SEC13_PICGU (Protein transport protein SEC13 OS=Pichia guilliermondii GN=SEC13 PE=3 SV=2) HSP 1 Score: 171.014 bits (432), Expect = 5.108e-42 Identity = 82/155 (52.90%), Postives = 102/155 (65.81%), Query Frame = 1 Query: 199 IETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLA-TLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVFMGP 660 I H++ +HD +D+YGKRLAT SSD +IKI + + + L TL GH GPVWQVAWAHPKFGSILASCSYDG+V++WKE W+ H++SVNS++WAPHELG L C SSDG +SV D G T I +AH +GV S P Sbjct: 4 IANAHDELIHDAVLDYYGKRLATCSSDKTIKIFEVEGTENYQLTETLVGHEGPVWQVAWAHPKFGSILASCSYDGKVLVWKESPDRSWSIISEHKVHQASVNSVSWAPHELGAVLLCTSSDGRVSVVDFN-DDGTSTHIIFEAHKIGVNSASWAP 157
BLAST of CN188416 vs. ExPASy Swiss-Prot
Match: SEC13_SCHPO (Protein transport protein sec13 OS=Schizosaccharomyces pombe GN=sec13 PE=1 SV=1) HSP 1 Score: 169.859 bits (429), Expect = 1.138e-41 Identity = 79/154 (51.30%), Postives = 103/154 (66.88%), Query Frame = 1 Query: 199 IETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVFMGP 660 ++T H+D +HD +D+YGKRLAT SSD +IK+ + N+ L TL+GH GPVWQ+ WAHPKFG+ILAS SYDG VI+W+E W++ H++SVN+++WAPHE G LAC SSDG +SV DG D TRI AH G +V P Sbjct: 4 VDTQHDDMIHDAILDYYGKRLATCSSDQTIKVFSIENNQQTLLETLRGHSGPVWQLGWAHPKFGTILASASYDGHVIVWRE-TGGVWSELMDHTAHQASVNAVSWAPHEYGALLACASSDGKVSVLEFKDDGSCD-TRIFTAHEPGCNAVCWSP 155
BLAST of CN188416 vs. ExPASy Swiss-Prot
Match: SEC13_COCIM (Protein transport protein SEC13 OS=Coccidioides immitis GN=SEC13 PE=3 SV=1) HSP 1 Score: 167.933 bits (424), Expect = 1.805e-41 Identity = 82/157 (52.23%), Postives = 107/157 (68.15%), Query Frame = 1 Query: 205 TGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQ-----NDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVFMGP 660 +GH+D +HD MD+YG+RLAT SSD +IKI L + + + TLKGH G VW VAWAHPKFG+ILAS SYDG+V+IW+E + + W++ F+ H +SVN ++WAPHELG LAC SSDG++SV D W T +I AH +GV SV P Sbjct: 8 SGHDDMIHDAGMDYYGRRLATCSSDKTIKIFELEGDSHRLIETLKGHEGAVWCVAWAHPKFGTILASSSYDGKVLIWREQSSAASTGSSWSRVFDFSLHTASVNMVSWAPHELGCVLACASSDGHVSVL-EFRDNSW-THQIFHAHGMGVNSVSWAP 162 HSP 2 Score: 22.7126 bits (47), Expect = 1.805e-41 Identity = 8/10 (80.00%), Postives = 9/10 (90.00%), Query Frame = 2 Query: 650 SWAPAMAPGA 679 SWAPA APG+ Sbjct: 159 SWAPAAAPGS 168
BLAST of CN188416 vs. ExPASy Swiss-Prot
Match: SEC13_ASPTN (Protein transport protein sec13 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=sec13 PE=3 SV=1) HSP 1 Score: 167.162 bits (422), Expect = 3.063e-41 Identity = 81/160 (50.62%), Postives = 106/160 (66.25%), Query Frame = 1 Query: 205 TGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQND--------WTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGVTSVFMGP 660 +GHED +HD +D+YG+RLAT SSD +IK+ + A + + TLKGH G VW VAWAHPKFG+ILAS SYDG+V+IW+E +QN WT+ F+ H +SVN ++WAPHE G L C SSDG++SV D W T +I AH +GV S+ P Sbjct: 10 SGHEDMIHDAGLDYYGRRLATCSSDKTIKVFEIEGEAHRLVETLKGHEGAVWCVAWAHPKFGTILASSSYDGKVLIWREQHQNTTSPAAGSAWTKVFDFSLHTASVNMVSWAPHESGCLLGCASSDGHVSVL-EFQDNSW-THQIFHAHGMGVNSISWAP 167 HSP 2 Score: 22.7126 bits (47), Expect = 3.063e-41 Identity = 8/10 (80.00%), Postives = 9/10 (90.00%), Query Frame = 2 Query: 650 SWAPAMAPGA 679 SWAPA APG+ Sbjct: 164 SWAPAAAPGS 173 The following BLAST results are available for this feature:
BLAST of CN188416 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 63
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CN188416 ID=CN188416; Name=CN188416; organism=Citrus sinensis; type=EST; length=680bpback to top |