CN188362
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN188362 vs. ExPASy Swiss-Prot
Match: NAM8_YEAST (Protein NAM8 OS=Saccharomyces cerevisiae GN=NAM8 PE=1 SV=2) HSP 1 Score: 90.5077 bits (223), Expect = 8.618e-18 Identity = 40/77 (51.95%), Postives = 54/77 (70.13%), Query Frame = -2 Query: 400 DPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRS 630 DPNNTT+F+GGL VT+D L+ F +G +V+VKIP GK CGFVQ+ +R AE A++ + G + +RLSWGRS Sbjct: 309 DPNNTTVFIGGLSSLVTEDELRAYFQPFGTIVYVKIPVGKCCGFVQYVDRLSAEAAIAGMQGFPIANSRVRLSWGRS 385
BLAST of CN188362 vs. ExPASy Swiss-Prot
Match: YG41_SCHPO (Uncharacterized RNA-binding protein C23E6.01c OS=Schizosaccharomyces pombe GN=SPBC23E6.01c PE=1 SV=2) HSP 1 Score: 89.7373 bits (221), Expect = 1.470e-17 Identity = 43/77 (55.84%), Postives = 55/77 (71.43%), Query Frame = -2 Query: 400 DPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRS 630 D N+T+FVGGL V+++ LK +F +GE+V+VKIP GK CGFVQF NR AE A++ L G LG IRLSWGR+ Sbjct: 299 DTANSTVFVGGLSKFVSEEELKYLFQNFGEIVYVKIPPGKGCGFVQFVNRQSAEIAINQLQGYPLGNSRIRLSWGRN 375
BLAST of CN188362 vs. ExPASy Swiss-Prot
Match: NGR1_YEAST (Negative growth regulatory protein NGR1 OS=Saccharomyces cerevisiae GN=NGR1 PE=1 SV=2) HSP 1 Score: 89.7373 bits (221), Expect = 1.470e-17 Identity = 44/102 (43.14%), Postives = 61/102 (59.80%), Query Frame = -2 Query: 325 DPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRSPSNKQSDQAQWNGGGYYGFAQGYEA 630 DP NTT+FVGGL P T+ L+++F +G +++V+IP GK CGFV+F R AE ++ L G +GG IRLSWGR S+ + G Y + G A Sbjct: 356 DPTNTTVFVGGLVPKTTEFQLRSLFKPFGPILNVRIPNGKNCGFVKFEKRIDAEASIQGLQGFIVGGSPIRLSWGRPSSSNAKTNSTIMGASQYMSSNGLRA 457
BLAST of CN188362 vs. ExPASy Swiss-Prot
Match: CSX1_SCHPO (RNA-binding post-transcriptional regulator csx1 OS=Schizosaccharomyces pombe GN=csx1 PE=1 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.521e-14 Identity = 33/77 (42.86%), Postives = 55/77 (71.43%), Query Frame = -2 Query: 400 DPNNTTIFVGGLDPSVTDDILKTVFGQYGELVHVKIPAGKRCGFVQFANRTCAEQALSVLNGTQLGGQSIRLSWGRS 630 DP NTT+FVGGL ++++ L+ F +G ++++KIP GK CGFVQ++ ++ AE+A++ + G +G IRL+WG + Sbjct: 293 DPLNTTVFVGGLASNLSEKDLQVCFQPFGRILNIKIPFGKGCGFVQYSEKSAAEKAINTMQGALVGTSHIRLAWGHN 369 The following BLAST results are available for this feature:
BLAST of CN188362 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CN188362 ID=CN188362; Name=CN188362; organism=Citrus sinensis; type=EST; length=673bpback to top |