CN188255
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188255 vs. ExPASy Swiss-Prot
Match: RSP41_ARATH (Arginine/serine-rich-splicing factor RSP41 OS=Arabidopsis thaliana GN=RSP41 PE=1 SV=2) HSP 1 Score: 107.457 bits (267), Expect = 7.701e-23 Identity = 88/235 (37.45%), Postives = 103/235 (43.83%), Query Frame = 2 Query: 5 SVEYAVRDDDDRRNGHXXXXXXXXXXXXXXXXXXXXXXXXXXXXDXXXXXXXXXXXXXXXXXDYGRVRSPSPYRRDRGSPDYGRNSSRSPYKKERAAIGHGRG-PSRSPYRRDR---------------GSPENGHGSSPSPYRKGK-----PSPNNGRGPSRS--PYE--RERPSPENXXXXXXXXXXXXXXXXDNGRVPSPNSMPEPRDSPGYDGADSPINERYRSRSPPAED 634 SVEYAV+DDD R NG+ R RSPSPYRR+RGSPDYGR +S +K+ER + +GRG S SPY+R R SPENG + SP RKG+ P P R SRS PYE RE SP +NG+V SP + E GYDGADSPI E SRSPPAE+ Sbjct: 161 SVEYAVKDDDSRGNGYSPERRRDRSPDR-------------------------------------RRRSPSPYRRERGSPDYGRGASPVAHKRERTSPDYGRGRRSPSPYKRARLSPDYKRDDRRRERVASPENGAVRNRSP-RKGRGESRSPPPYEKRRESRSPPPYEKRRESRSPPPYEKRRERSRSRSKSSPENGQVESPGQIMEVEAGRGYDGADSPIRES-PSRSPPAEE 356
BLAST of CN188255 vs. ExPASy Swiss-Prot
Match: RSP40_ARATH (Arginine/serine-rich-splicing factor RSP40 OS=Arabidopsis thaliana GN=RSP40 PE=1 SV=2) HSP 1 Score: 103.99 bits (258), Expect = 8.515e-22 Identity = 78/226 (34.51%), Postives = 102/226 (45.13%), Query Frame = 2 Query: 5 SVEYAVRDDDDRRNGHXXXXXXXXXXXXXXXXXXXXXXXXXXXXDXXXXXXXXXXXXXXXXXDYGRVRSPSPYRRDRGSPDYGRNSSR-SPYKKERAAIGHGRGPSRSPYRRD-RGSPENGHG--SSPSPYR--------KGKPSPNNGR---GPSRSPYERERP-SPENXXXXXXXXXXXXXXXXDNGRVPSPNSMPEPRDSPGYDGADSPINERYRSRSPPAED 634 SVEYAV+DDD R NGH R RSPSPY+R+RGSPDYGR +S + Y+KER + +GR S SPY++ RGSPE G + SP R K SPNN R P+ SP+++E P + +NG+V SP S+ GYDGA+SP+ + RSPPA++ Sbjct: 162 SVEYAVKDDDARGNGHSPERRRDRSPER-------------------------------------RRRSPSPYKRERGSPDYGRGASPVAAYRKERTSPDYGRRRSPSPYKKSRRGSPEYGRDRRGNDSPRRRERVASPTKYSRSPNNKRERMSPNHSPFKKESPRNGVGEVESPIERRERSRSSPENGQVESPGSIGRRDSDGGYDGAESPMQKSRSPRSPPADE 350 The following BLAST results are available for this feature:
BLAST of CN188255 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 2
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CN188255 ID=CN188255; Name=CN188255; organism=Citrus sinensis; type=EST; length=721bpback to top |