CN188110
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188110 vs. ExPASy Swiss-Prot
Match: Y1736_ARATH (REF/SRPP-like protein At1g67360 OS=Arabidopsis thaliana GN=At1g67360 PE=2 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 1.780e-27 Identity = 56/97 (57.73%), Postives = 72/97 (74.23%), Query Frame = -2 Query: 259 QKAQNLVSEAQTGGPRAAVHYAAAESKHLLVTNSVKAWYKLNHYALFHTMADMAVPTAAQWSKKYNHLVVEMTKKGYTVFGYLPLVPIDDIAKAFKQ 549 +KAQ+ V EA+TGGP+AA +YAA E K +VTNSVK W KLN Y H M D A+P AA +S +YN LV +MT GY++ GYLPLVP+DDI KA+++ Sbjct: 112 EKAQSFVKEARTGGPKAAFNYAATEYKFFVVTNSVKVWAKLNQYKPIHAMGDKALPVAAHFSSRYNDLVTDMTNMGYSLVGYLPLVPVDDIVKAYEK 208
BLAST of CN188110 vs. ExPASy Swiss-Prot
Match: Y3550_ARATH (REF/SRPP-like protein At3g05500 OS=Arabidopsis thaliana GN=At3g05500 PE=2 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 5.203e-11 Identity = 33/64 (51.56%), Postives = 43/64 (67.19%), Query Frame = -2 Query: 259 SVKAWYKLNHYALFHTMADMAVPTAAQWSKKYNHLVVEMTKKGYTVFGYLPLVPIDDIAKAFKQ 450 +V AW KLN LF +A +AVPTAA S+KYN VV+ +KGY V Y+PLVP + I+K F + Sbjct: 169 AVSAWKKLNQLPLFPRLAQVAVPTAAFCSEKYNDTVVKAAEKGYRVTSYMPLVPTERISKIFAE 232
BLAST of CN188110 vs. ExPASy Swiss-Prot
Match: SRP_VITRI (Stress-related protein OS=Vitis riparia GN=SRP PE=2 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 5.203e-11 Identity = 32/63 (50.79%), Postives = 41/63 (65.08%), Query Frame = -2 Query: 262 SVKAWYKLNHYALFHTMADMAVPTAAQWSKKYNHLVVEMTKKGYTVFGYLPLVPIDDIAKAFK 450 +V AW LN LF +A + VPTAA WS+KYN V ++GYTV YLPL+P + IAK F+ Sbjct: 167 AVSAWRSLNRLPLFPQVAQVVVPTAAYWSEKYNQSVSYTAERGYTVALYLPLIPTERIAKVFQ 229
BLAST of CN188110 vs. ExPASy Swiss-Prot
Match: SRP_PHAVU (Stress-related protein OS=Phaseolus vulgaris GN=SRP PE=2 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 8.875e-11 Identity = 35/94 (37.23%), Postives = 53/94 (56.38%), Query Frame = -2 Query: 265 KAQNLVSEAQTGGPRAAVHYAAAESKHLLVTNSVKAWYKLNHYALFHTMADMAVPTAAQWSKKYNHLVVEMTKKGYTVFGYLPLVPIDDIAKAF 546 +A+++VSE + G ++ + +V AW KLN LF +A+ +P AA ++KYN ++V +KGY V YLPLVP + IAK F Sbjct: 71 QARSVVSEVRRDGVSTFAKTVYSKYEPTAEQCAVSAWRKLNQLPLFPQVANAVLPKAAYCTEKYNEVIVSSAEKGYRVSAYLPLVPTEKIAKVF 164 The following BLAST results are available for this feature:
BLAST of CN188110 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CN188110 ID=CN188110; Name=CN188110; organism=Citrus sinensis; type=EST; length=550bpback to top |