CN188058
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188058 vs. ExPASy Swiss-Prot
Match: CML49_ARATH (Probable calcium-binding protein CML49 OS=Arabidopsis thaliana GN=CML49 PE=2 SV=1) HSP 1 Score: 280.411 bits (716), Expect = 6.348e-75 Identity = 133/166 (80.12%), Postives = 152/166 (91.57%), Query Frame = -1 Query: 179 VACFQLADRDNSGLIDDKELQGALSSYNQSFSLRTVRLLMYTFTNTNARKIGPKEFIQVFHSLQNWRAMFEKVDRDRSGKIDSNELREALMSLGFAVSPVVLDLLVTKFDKTGGKSKAIEYDNFIECCLTVKGLTEKFKERDTTYSGSATFTYENFMLAVLPFLIA 676 VACFQ ADRDNSG IDDKELQGALSSYNQSFS+RTV LLMY FTN+N RKIGPKEF +F SLQNWR++FE+ D+DRSG+ID+NELR+ALMSLGF+VSPV+LDLLV+KFDK+GG+++AIEYDNFIECCLTVKGLTEKFKE+DT SGSA F YENFML VLPFL+A Sbjct: 170 VACFQAADRDNSGFIDDKELQGALSSYNQSFSIRTVHLLMYLFTNSNVRKIGPKEFTSLFFSLQNWRSIFERFDKDRSGRIDTNELRDALMSLGFSVSPVILDLLVSKFDKSGGRNRAIEYDNFIECCLTVKGLTEKFKEKDTALSGSAIFNYENFMLTVLPFLVA 335
BLAST of CN188058 vs. ExPASy Swiss-Prot
Match: CML50_ARATH (Probable calcium-binding protein CML50 OS=Arabidopsis thaliana GN=CML50 PE=2 SV=1) HSP 1 Score: 275.018 bits (702), Expect = 2.667e-73 Identity = 132/166 (79.52%), Postives = 151/166 (90.96%), Query Frame = -1 Query: 179 VACFQLADRDNSGLIDDKELQGALSSYNQSFSLRTVRLLMYTFTNTNARKIGPKEFIQVFHSLQNWRAMFEKVDRDRSGKIDSNELREALMSLGFAVSPVVLDLLVTKFDKTGGKSKAIEYDNFIECCLTVKGLTEKFKERDTTYSGSATFTYENFMLAVLPFLIA 676 VACFQ AD+D SG IDDKELQGALSSY Q FS+RTV LLMY FTN+NA KIGPKEF +F+SLQNWR++FE+ D+DRSG+ID NELR+AL+SLGF+VSPVVLDLLV+KFDK+GGK++AIEYDNFIECCLTVKGLTEKFKE+DT YSGSATF YE+FML VLPFLIA Sbjct: 189 VACFQAADQDGSGFIDDKELQGALSSYQQRFSMRTVHLLMYLFTNSNAMKIGPKEFTALFYSLQNWRSIFERSDKDRSGRIDVNELRDALLSLGFSVSPVVLDLLVSKFDKSGGKNRAIEYDNFIECCLTVKGLTEKFKEKDTAYSGSATFNYESFMLTVLPFLIA 354
BLAST of CN188058 vs. ExPASy Swiss-Prot
Match: CML48_ARATH (Probable calcium-binding protein CML48 OS=Arabidopsis thaliana GN=CML48 PE=2 SV=2) HSP 1 Score: 144.821 bits (364), Expect = 4.163e-34 Identity = 74/167 (44.31%), Postives = 114/167 (68.26%), Query Frame = -1 Query: 185 VACFQLADRDNSGLIDDKELQGALS-SYNQSFSLRTVRLLM--YTFTNTNARKIGPKEFIQVFHSLQNWRAMFEKVDRDRSGKIDSNELREALMSLGFAVSPVVLDLLVTKFDKTGGKSKAIEYDNFIECCLTVKGLTEKFKERDTTYSGSATFTYENFMLAVLPFL 676 V F+ ADR+ SG +++ EL+ ALS S S RT+RLL+ Y + ++GPKE++++++ L WRA+F + DRDRSGK++S +LR+A +LG + V L+V++FD GK+ + +D+F+EC + VKGLTEKF+E D Y+G AT +Y+ FML V+PF+ Sbjct: 58 VRSFESADRNRSGFLEESELRQALSLSGYDGISNRTIRLLLFIYKIPVDSLLRLGPKEYVELWNCLAQWRAIFNRYDRDRSGKMNSTQLRDAFYNLGCVLPTSVHQLIVSQFDDGTGKTVDLCFDSFLECGMIVKGLTEKFRENDPGYTGYATLSYDVFMLMVIPFI 224
BLAST of CN188058 vs. ExPASy Swiss-Prot
Match: PEF1_DANRE (Peflin OS=Danio rerio GN=pef1 PE=2 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 5.101e-24 Identity = 56/163 (34.36%), Postives = 99/163 (60.74%), Query Frame = -1 Query: 182 FQLADRDNSGLIDDKELQGALSSYNQS-FSLRTVRLLMYTFTNTNARKIGPKEFIQVFHSLQNWRAMFEKVDRDRSGKIDSNELREALMSLGFAVSPVVLDLLVTKFDKTGGKSKAIEYDNFIECCLTVKGLTEKFKERDTTYSGSATFTYENFMLAVLPFLI 667 F D D SG I+ KEL+ AL ++N S F+ T +++ F T + ++ F ++ LQ WRA F++ DRDRSG I++NE+ +AL +G+ +SP + LV ++ GG + ++ D FI+ C ++ +T+ F+E+DT +G+ +YE+F+ + + L+ Sbjct: 109 FSTVDSDQSGYINAKELKQALMNFNNSSFNDETCIMMLNMFDKTKSGRVDVFGFSALWTFLQQWRAAFQQFDRDRSGSINTNEMHQALSQMGYNLSPQFIQELVNRYSVRGG-TGVLQLDRFIQVCTQLQSMTQAFREKDTGMTGNVRMSYEDFLSSAITRLM 270
BLAST of CN188058 vs. ExPASy Swiss-Prot
Match: PEF1_XENLA (Peflin OS=Xenopus laevis GN=pef1 PE=2 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.256e-22 Identity = 54/155 (34.84%), Postives = 95/155 (61.29%), Query Frame = -1 Query: 206 FQLADRDNSGLIDDKELQGALSSYN-QSFSLRTVRLLMYTFTNTNARKIGPKEFIQVFHSLQNWRAMFEKVDRDRSGKIDSNELREALMSLGFAVSPVVLDLLVTKFDKTGGKSKAIEYDNFIECCLTVKGLTEKFKERDTTYSGSATFTYENFM 667 FQ D D+SG I KEL+ AL + N SF+ T ++M F +N+ +I F ++ +Q WR +F++ DRDRSG I+ EL +AL +G+ +SP + ++++++ + + ++ D FI+ C ++ +TE F+E+DT G+A +YE+F+ Sbjct: 122 FQTVDTDHSGYISLKELKQALVNTNWSSFNDETCTMMMNMFDKSNSGRIDMFGFSALWRFIQQWRNLFQQYDRDRSGSINQGELHQALCQMGYQLSPQFVQIVMSRYAQRSAQ-PGLQLDRFIQICTQLQSMTEAFREKDTGQIGTAKLSYEDFI 275
BLAST of CN188058 vs. ExPASy Swiss-Prot
Match: PDCD6_MOUSE (Programmed cell death protein 6 OS=Mus musculus GN=Pdcd6 PE=1 SV=2) HSP 1 Score: 106.686 bits (265), Expect = 1.256e-22 Identity = 60/165 (36.36%), Postives = 93/165 (56.36%), Query Frame = -1 Query: 197 ESYFVACFQLADRDNSGLIDDKELQGALSSYNQS-FSLRTVRLLMYTFTNTNARKIGPKEFIQVFHSLQNWRAMFEKVDRDRSGKIDSNELREALMSLGFAVSPVVLDLLVTKFDKTGGKSKAIEYDNFIECCLTVKGLTEKFKERDTTYSGSATFTYENFMLAV 688 +S+ FQ D+D SG+I D ELQ ALS+ + F+ TVR ++ F N + EF V+ + +W+ +F DRD SG ID NEL++AL G+ +S D+L+ KFD+ G I +D+FI+ C+ ++ LT+ F+ DT G +YE ++ V Sbjct: 25 QSFLWNVFQRVDKDRSGVISDNELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTGVWKYITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQG--RGQIAFDDFIQGCIVLQRLTDIFRRYDTDQDGWIQVSYEQYLSMV 187
BLAST of CN188058 vs. ExPASy Swiss-Prot
Match: PDCD6_HUMAN (Programmed cell death protein 6 OS=Homo sapiens GN=PDCD6 PE=1 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.641e-22 Identity = 60/165 (36.36%), Postives = 93/165 (56.36%), Query Frame = -1 Query: 197 ESYFVACFQLADRDNSGLIDDKELQGALSSYNQS-FSLRTVRLLMYTFTNTNARKIGPKEFIQVFHSLQNWRAMFEKVDRDRSGKIDSNELREALMSLGFAVSPVVLDLLVTKFDKTGGKSKAIEYDNFIECCLTVKGLTEKFKERDTTYSGSATFTYENFMLAV 688 +S+ FQ D+D SG+I D ELQ ALS+ + F+ TVR ++ F N + EF V+ + +W+ +F DRD SG ID NEL++AL G+ +S D+L+ KFD+ G I +D+FI+ C+ ++ LT+ F+ DT G +YE ++ V Sbjct: 25 QSFLWNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTGVWKYITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQG--RGQIAFDDFIQGCIVLQRLTDIFRRYDTDQDGWIQVSYEQYLSMV 187
BLAST of CN188058 vs. ExPASy Swiss-Prot
Match: PEF1_MOUSE (Peflin OS=Mus musculus GN=Pef1 PE=2 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.389e-21 Identity = 58/155 (37.42%), Postives = 92/155 (59.35%), Query Frame = -1 Query: 206 FQLADRDNSGLIDDKELQGALSSYN-QSFSLRTVRLLMYTFTNTNARKIGPKEFIQVFHSLQNWRAMFEKVDRDRSGKIDSNELREALMSLGFAVSPVVLDLLVTKFDKTGGKSKAIEYDNFIECCLTVKGLTEKFKERDTTYSGSATFTYENFM 667 FQ D D+SG I KEL+ AL + N SF+ T +++ F T + +I F ++ LQ WR +F++ DRDRSG I S EL++AL +G+ +SP LLV+++ A++ D FI+ C ++ LTE F+E+DT G+ ++E+F+ Sbjct: 114 FQSVDADHSGYISLKELKQALVNSNWSSFNDETCLMMINMFDKTKSGRIDVAGFSALWKFLQQWRNLFQQYDRDRSGSISSTELQQALSQMGYNLSPQFTQLLVSRYCARSA-IPAMQLDCFIKVCTQLQVLTEAFREKDTAVQGNIRLSFEDFV 267
BLAST of CN188058 vs. ExPASy Swiss-Prot
Match: SORCN_SCHJA (Sorcin OS=Schistosoma japonicum PE=2 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.814e-21 Identity = 56/163 (34.36%), Postives = 90/163 (55.21%), Query Frame = -1 Query: 182 FQLADRDNSGLIDDKELQGALSS-YNQSFSLRTVRLLMYTFTNTNARKIGPKEFIQVFHSLQNWRAMFEKVDRDRSGKIDSNELREALMSLGFAVSPVVLDLLVTKFDKTGGKSKAIEYDNFIECCLTVKGLTEKFKERDTTYSGSATFTYENFMLAVLPFLI 667 F D D SG I ELQ +LS+ ++RTV+L++ F I EF+ +F +Q+W+ F + DRD SG ID NE AL+S G+ +SP ++L++ +FD+ G +I +D+FI C+ ++ LT +F D G F++E F+ + +I Sbjct: 12 FSRVDADKSGSISANELQTSLSNGLGTPLNIRTVQLMVAMFDRDMNGTINFNEFLGLFKYVQDWQTCFRRYDRDNSGSIDLNEFSNALISFGYHLSPQFVNLMMRRFDRNRG---SIAFDDFIYACVCLQTLTREFSRYDCRGIGHTVFSFEQFLTSAFAVII 171
BLAST of CN188058 vs. ExPASy Swiss-Prot
Match: PEF1_HUMAN (Peflin OS=Homo sapiens GN=PEF1 PE=1 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 4.041e-21 Identity = 55/155 (35.48%), Postives = 92/155 (59.35%), Query Frame = -1 Query: 206 FQLADRDNSGLIDDKELQGALSSYN-QSFSLRTVRLLMYTFTNTNARKIGPKEFIQVFHSLQNWRAMFEKVDRDRSGKIDSNELREALMSLGFAVSPVVLDLLVTKFDKTGGKSKAIEYDNFIECCLTVKGLTEKFKERDTTYSGSATFTYENFM 667 FQ D D+SG I KEL+ AL + N SF+ T +++ F T + +I F ++ +Q W+ +F++ DRDRSG I EL++AL +G+ +SP LLV+++ + A++ D FI+ C ++ LTE F+E+DT G+ ++E+F+ Sbjct: 123 FQSVDSDHSGYISMKELKQALVNCNWSSFNDETCLMMINMFDKTKSGRIDVYGFSALWKFIQQWKNLFQQYDRDRSGSISYTELQQALSQMGYNLSPQFTQLLVSRYCPRSA-NPAMQLDRFIQVCTQLQVLTEAFREKDTAVQGNIRLSFEDFV 276 The following BLAST results are available for this feature:
BLAST of CN188058 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 29
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188058 ID=CN188058; Name=CN188058; organism=Citrus sinensis; type=EST; length=700bpback to top |