CN188049
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188049 vs. ExPASy Swiss-Prot
Match: TMM19_RAT (Transmembrane protein 19 OS=Rattus norvegicus GN=Tmem19 PE=2 SV=2) HSP 1 Score: 131.724 bits (330), Expect = 4.942e-30 Identity = 83/220 (37.73%), Postives = 116/220 (52.73%), Query Frame = 2 Query: 119 YRRKSLNFSGAVSGFIVMTAHIAAGSRFGALLLVFFFTSSKLTKVGEERKRRVDADFKEGGQRNWIQVLSNSGIAAVLVVIVWKLTGQQDKCLDSKELPLVTSLIGGILGHYCCCNGDTWSSELG-VLSDEQPRLITTFKPVRRGTNXXXXXXXXXXXXXXXXXXXXTFVLFGFFTATCT----RDIALKQLLVIPISAIAGLCGSLIDSLLGATLQFSG 763 +++KSL+ SGA+ G +V A F LL+FF TSSKLTK E K+R+D+++KEGGQRNW+QV N G+ L ++ G + +D + + + +L GDTW+SE+ VLS PRLITT++ V GTN TFV +F DI+ Q +I +AGL GS++DS LGAT+QFSG Sbjct: 84 FKKKSLDHSGALGGLVVGFILTIANFSFFTSLLMFFLTSSKLTKWRGEMKKRLDSEYKEGGQRNWVQVFCNGGVPTELALLYMIENGPGEMPIDFAKQHTASWMCLSLLAALASSAGDTWASEVAPVLSKSSPRLITTWEKVPVGTN-----GGVTAVGLVSSLLGGTFVGLAYFLTQLVFVNDLDISAPQWPLIAFGGLAGLLGSIVDSFLGATMQFSG 298
BLAST of CN188049 vs. ExPASy Swiss-Prot
Match: TMM19_PONAB (Transmembrane protein 19 OS=Pongo abelii GN=TMEM19 PE=2 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 3.203e-29 Identity = 82/219 (37.44%), Postives = 116/219 (52.97%), Query Frame = 2 Query: 122 RRKSLNFSGAVSGFIVMTAHIAAGSRFGALLLVFFFTSSKLTKVGEERKRRVDADFKEGGQRNWIQVLSNSGIAAVLVVIVWKLTGQQDKCLDSKELPLVTSLIGGILGHYCCCNGDTWSSELG-VLSDEQPRLITTFKPVRRGTNXXXXXXXXXXXXXXXXXXXXTFVLFGFFTATC----TRDIALKQLLVIPISAIAGLCGSLIDSLLGATLQFSG 763 ++KSL+ SGA+ G +V A F LL+FF +SSKLTK E K+R+D+++KEGGQRNWIQV N + L ++ G + +D + + + +L C GDTW+SE+G VLS PRLITT++ V GTN TFV +F DI+ Q +I +AGL GS++DS LGAT+Q++G Sbjct: 70 KKKSLDHSGALGGLVVGFILTIANFSFFTSLLMFFLSSSKLTKWKGEMKKRLDSEYKEGGQRNWIQVFCNGAVPTELALLYMIENGPGEIPVDFSKQYSASWMCLSLLAALACSAGDTWASEVGPVLSKSPPRLITTWEKVPVGTN-----GGVTVVGLVSSLLGGTFVGIAYFLTQLIFVNDLDISAPQWPIIAFGGLAGLLGSIVDSYLGATMQYTG 283
BLAST of CN188049 vs. ExPASy Swiss-Prot
Match: TMM19_HUMAN (Transmembrane protein 19 OS=Homo sapiens GN=TMEM19 PE=2 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 5.464e-29 Identity = 81/219 (36.99%), Postives = 116/219 (52.97%), Query Frame = 2 Query: 122 RRKSLNFSGAVSGFIVMTAHIAAGSRFGALLLVFFFTSSKLTKVGEERKRRVDADFKEGGQRNWIQVLSNSGIAAVLVVIVWKLTGQQDKCLDSKELPLVTSLIGGILGHYCCCNGDTWSSELG-VLSDEQPRLITTFKPVRRGTNXXXXXXXXXXXXXXXXXXXXTFVLFGFFTATC----TRDIALKQLLVIPISAIAGLCGSLIDSLLGATLQFSG 763 ++KSL+ SGA+ G +V A F LL+FF +SSKLTK E K+R+D+++KEGGQRNW+QV N + L ++ G + +D + + + +L C GDTW+SE+G VLS PRLITT++ V GTN TFV +F DI+ Q +I +AGL GS++DS LGAT+Q++G Sbjct: 70 KKKSLDHSGALGGLVVGFILTIANFSFFTSLLMFFLSSSKLTKWKGEVKKRLDSEYKEGGQRNWVQVFCNGAVPTELALLYMIENGPGEIPVDFSKQYSASWMCLSLLAALACSAGDTWASEVGPVLSKSSPRLITTWEKVPVGTN-----GGVTVVGLVSSLLGGTFVGIAYFLTQLIFVNDLDISAPQWPIIAFGGLAGLLGSIVDSYLGATMQYTG 283
BLAST of CN188049 vs. ExPASy Swiss-Prot
Match: TMM19_XENLA (Transmembrane protein 19 OS=Xenopus laevis GN=tmem19 PE=2 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 1.590e-28 Identity = 81/223 (36.32%), Postives = 116/223 (52.02%), Query Frame = 2 Query: 122 RRKSLNFSGAVSGFIVMTAHIAAGSRFGALLLVFFFTSSKLTKVGEERKRRVDADFKEGGQRNWIQVLSNSGIAAVLVVIVWKLTGQQDKCLDSKELPLVTSLIGGILGHYCCCNGDTWSSELG-VLSDEQPRLITTFKPVRRGTNXXXXXXXXXXXXXXXXXXXXTFVLFGFFTATCTRDIALKQLLVIPISAIAGLCGSLIDSLLGATLQFSGFCSVRNKV 787 +++SL+ SGA+ G +V A F + LL FFF SSKLTK E K+ D+++KEGGQRNW+QV N G+ A L ++ G + +D + + + +LG C GDTW+SE+G VLS PRLITT++ V GTN + + +IA Q ++ +AGL GSLIDS LGA +Q+SG+ K+ Sbjct: 70 KKRSLDSSGALGGLLVGFILTIANYSFFSALLAFFFISSKLTKWRGEVKKCYDSEYKEGGQRNWVQVFCNGGLPAELALLYMIENGPGEIPIDFSKEYTASWMCLSLLGALSCSAGDTWASEIGPVLSKSAPRLITTWEKVPVGTNGGVTPIGLISSLLGGISVGVAYFVTQLVFVD-DLEIAAPQWPIVIYGGMAGLLGSLIDSYLGAIMQYSGYDESTGKI 291
BLAST of CN188049 vs. ExPASy Swiss-Prot
Match: TMM19_MOUSE (Transmembrane protein 19 OS=Mus musculus GN=Tmem19 PE=2 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 7.890e-28 Identity = 79/220 (35.91%), Postives = 113/220 (51.36%), Query Frame = 2 Query: 119 YRRKSLNFSGAVSGFIVMTAHIAAGSRFGALLLVFFFTSSKLTKVGEERKRRVDADFKEGGQRNWIQVLSNSGIAAVLVVIVWKLTGQQDKCLDSKELPLVTSLIGGILGHYCCCNGDTWSSELG-VLSDEQPRLITTFKPVRRGTNXXXXXXXXXXXXXXXXXXXXTFVLFGFFTATCT----RDIALKQLLVIPISAIAGLCGSLIDSLLGATLQFSG 763 +++KSL+ SGA+ G +V A F L+ FF +SSKLTK K+++D+++KEGGQRNW+QV N + L ++ G + +D + + + +L GDTW+SE+ VLS PRLITT++ V GTN TFV +F DI+ Q +I +AGL GSL+DS LGAT+QFSG Sbjct: 69 FKKKSLDHSGALGGLVVGFILTIANFSFFTSLMTFFLSSSKLTKWRGNIKKQLDSEYKEGGQRNWVQVFCNGAVPTELALLYMIENGPGEMPIDFSKQHTASWMCLSLLAALASSAGDTWASEVAPVLSKSSPRLITTWEKVPVGTN-----GGVTAVGLASSLLGGTFVGLAYFLTQLVFVNDLDISAPQWPIIAFGGVAGLFGSLVDSFLGATMQFSG 283
BLAST of CN188049 vs. ExPASy Swiss-Prot
Match: TMM19_XENTR (Transmembrane protein 19 OS=Xenopus tropicalis GN=tmem19 PE=2 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 1.346e-27 Identity = 80/223 (35.87%), Postives = 115/223 (51.57%), Query Frame = 2 Query: 122 RRKSLNFSGAVSGFIVMTAHIAAGSRFGALLLVFFFTSSKLTKVGEERKRRVDADFKEGGQRNWIQVLSNSGIAAVLVVIVWKLTGQQDKCLDSKELPLVTSLIGGILGHYCCCNGDTWSSELG-VLSDEQPRLITTFKPVRRGTNXXXXXXXXXXXXXXXXXXXXTFVLFGFFTATCTRDIALKQLLVIPISAIAGLCGSLIDSLLGATLQFSGFCSVRNKV 787 +++SL+ SGA+ G +V A F + LL FFF SSKLTK E K+ D+++KEGGQRNW+QV N G+ A L ++ G + +D + + + +LG GDTW+SE+G VLS PRLITT++ V GTN + + +IA Q ++ +AGL GSLIDS LGA +Q+SG+ K+ Sbjct: 70 KKRSLDNSGALGGLLVGFILTIANYSFFSALLTFFFISSKLTKWKGEVKKCYDSEYKEGGQRNWVQVFCNGGLPAELALLYMIENGPGEIPIDFSKEYTASWMCLSLLGALASSAGDTWASEIGPVLSKSSPRLITTWEKVPVGTNGGVTPVGLISSLLGGTSVGVAYFVTQLIFVP-DLEIAAPQWPIVIYGGMAGLLGSLIDSYLGAIMQYSGYDESTGKI 291 The following BLAST results are available for this feature:
BLAST of CN188049 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CN188049 ID=CN188049; Name=CN188049; organism=Citrus sinensis; type=EST; length=838bpback to top |