CN187747
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN187747 vs. ExPASy Swiss-Prot
Match: 2NPD_NEUCR (2-nitropropane dioxygenase OS=Neurospora crassa GN=ncd-2 PE=1 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 3.069e-21 Identity = 65/190 (34.21%), Postives = 104/190 (54.74%), Query Frame = 3 Query: 180 RKTRSLTERPF----GVGVVLAFPHNENIKAILSEKVAVL-----QVSW---------------GEYSEELVLEA-HSAGVKVVPQVGSFDEARKAVNAGVDAIIVQGREAGGHVIGQ-DGLISLLPMVVDLIG----DRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRFVASEESYAHPEYKRKLV 659 R LT+RP G+GV L H ++ + + +L Q W + + + ++EA H++G V QVG+ +ARKA G D I+ QG +AGGH + G++SL+P V D++ +R++ ++AAGG+ D RG V AL LGA+G+ LGTRF + E+ + PE++RK++ Sbjct: 83 RSRLGLTDRPLTPLPGIGVGLILTHTISVPYVTDTVLPILIEHSPQAVWLFANDPDFEASSEPGAKGTAKQIIEALHASGFVVFFQVGTVKDARKAAADGADVIVAQGIDAGGHQLATGSGIVSLVPEVRDMLDREFKEREVVVVAAGGVADGRGVVGALGLGAEGVVLGTRFTVAVEA-STPEFRRKVI 271
BLAST of CN187747 vs. ExPASy Swiss-Prot
Match: 2NPD_STAAT (Probable 2-nitropropane dioxygenase OS=Staphylococcus aureus (strain USA300 / TCH1516) GN=USA300HOU_0879 PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.598e-20 Identity = 56/152 (36.84%), Postives = 91/152 (59.87%), Query Frame = 3 Query: 249 NIKAILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQVGSFDEARKAVNAGVDAIIVQGREAGGH---------VIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRFVASEESYAHPEYKRKLVEMDKTE 677 +I I+ ++V V ++G SE+++ +A VK++ S DEA AG+DAI+ QG EAGGH + G ISL+P +VD++ IP+IAAGGI+D RG +A++ LGA+G+ +GT F+ S++S A + ++ +T+ Sbjct: 117 HIDTIIKKQVPVCCFTFGIPSEQIISRLKAANVKLIGTATSVDEAIANEKAGMDAIVAQGSEAGGHRGSFLKPKNQLPMVGTISLVPQIVDVVS---IPVIAAGGIMDGRGVLASIVLGAEGVQMGTAFLTSQDSNASELLRDAIINSKETD 265
BLAST of CN187747 vs. ExPASy Swiss-Prot
Match: 2NPD_STAAE (Probable 2-nitropropane dioxygenase OS=Staphylococcus aureus (strain Newman) GN=NWMN_0792 PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.598e-20 Identity = 56/152 (36.84%), Postives = 91/152 (59.87%), Query Frame = 3 Query: 249 NIKAILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQVGSFDEARKAVNAGVDAIIVQGREAGGH---------VIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRFVASEESYAHPEYKRKLVEMDKTE 677 +I I+ ++V V ++G SE+++ +A VK++ S DEA AG+DAI+ QG EAGGH + G ISL+P +VD++ IP+IAAGGI+D RG +A++ LGA+G+ +GT F+ S++S A + ++ +T+ Sbjct: 117 HIDTIIKKQVPVCCFTFGIPSEQIISRLKAANVKLIGTATSVDEAIANEKAGMDAIVAQGSEAGGHRGSFLKPKNQLPMVGTISLVPQIVDVVS---IPVIAAGGIMDGRGVLASIVLGAEGVQMGTAFLTSQDSNASELLRDAIINSKETD 265
BLAST of CN187747 vs. ExPASy Swiss-Prot
Match: 2NPD_STAAC (Probable 2-nitropropane dioxygenase OS=Staphylococcus aureus (strain COL) GN=SACOL0922 PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.598e-20 Identity = 56/152 (36.84%), Postives = 91/152 (59.87%), Query Frame = 3 Query: 249 NIKAILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQVGSFDEARKAVNAGVDAIIVQGREAGGH---------VIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRFVASEESYAHPEYKRKLVEMDKTE 677 +I I+ ++V V ++G SE+++ +A VK++ S DEA AG+DAI+ QG EAGGH + G ISL+P +VD++ IP+IAAGGI+D RG +A++ LGA+G+ +GT F+ S++S A + ++ +T+ Sbjct: 117 HIDTIIKKQVPVCCFTFGIPSEQIISRLKAANVKLIGTATSVDEAIANEKAGMDAIVAQGSEAGGHRGSFLKPKNQLPMVGTISLVPQIVDVVS---IPVIAAGGIMDGRGVLASIVLGAEGVQMGTAFLTSQDSNASELLRDAIINSKETD 265
BLAST of CN187747 vs. ExPASy Swiss-Prot
Match: 2NPD_STAA8 (Probable 2-nitropropane dioxygenase OS=Staphylococcus aureus (strain NCTC 8325) GN=SAOUHSC_00855 PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.598e-20 Identity = 56/152 (36.84%), Postives = 91/152 (59.87%), Query Frame = 3 Query: 249 NIKAILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQVGSFDEARKAVNAGVDAIIVQGREAGGH---------VIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRFVASEESYAHPEYKRKLVEMDKTE 677 +I I+ ++V V ++G SE+++ +A VK++ S DEA AG+DAI+ QG EAGGH + G ISL+P +VD++ IP+IAAGGI+D RG +A++ LGA+G+ +GT F+ S++S A + ++ +T+ Sbjct: 117 HIDTIIKKQVPVCCFTFGIPSEQIISRLKAANVKLIGTATSVDEAIANEKAGMDAIVAQGSEAGGHRGSFLKPKNQLPMVGTISLVPQIVDVVS---IPVIAAGGIMDGRGVLASIVLGAEGVQMGTAFLTSQDSNASELLRDAIINSKETD 265
BLAST of CN187747 vs. ExPASy Swiss-Prot
Match: 2NPD_STAA3 (Probable 2-nitropropane dioxygenase OS=Staphylococcus aureus (strain USA300) GN=SAUSA300_0825 PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.598e-20 Identity = 56/152 (36.84%), Postives = 91/152 (59.87%), Query Frame = 3 Query: 249 NIKAILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQVGSFDEARKAVNAGVDAIIVQGREAGGH---------VIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRFVASEESYAHPEYKRKLVEMDKTE 677 +I I+ ++V V ++G SE+++ +A VK++ S DEA AG+DAI+ QG EAGGH + G ISL+P +VD++ IP+IAAGGI+D RG +A++ LGA+G+ +GT F+ S++S A + ++ +T+ Sbjct: 117 HIDTIIKKQVPVCCFTFGIPSEQIISRLKAANVKLIGTATSVDEAIANEKAGMDAIVAQGSEAGGHRGSFLKPKNQLPMVGTISLVPQIVDVVS---IPVIAAGGIMDGRGVLASIVLGAEGVQMGTAFLTSQDSNASELLRDAIINSKETD 265
BLAST of CN187747 vs. ExPASy Swiss-Prot
Match: 2NPD_BACSU (Probable 2-nitropropane dioxygenase OS=Bacillus subtilis GN=yrpB PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 4.431e-20 Identity = 76/258 (29.46%), Postives = 119/258 (46.12%), Query Frame = 3 Query: 51 IVQAPLGPDISGPEXXXXXXXXXXXXXXRAPDWEAPDYLRDLIRKTRSLTERPFGVGVV----LAFPHNENIK------------------------------AILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQVGSFDEARKAVNAGVDAIIVQGREAGGH------VIGQD--GLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRFVASEESYAHPEYKRKLVEMDK--TEYTDVF 692 I+QAP+ I+ P A + PD L I++ LT+ PF + V L P + IK IL KV ++ E+ V E +AG ++ + +EA G+D +++QG EAGGH G+ GL++L+P D + +P+IAAGG++D RG AAL+LGAQG+ +G+ F+ ES AHP +K+K++E ++ T+ T +F Sbjct: 14 IIQAPMAGGITKPRLASAVSNQGALGSL-ASGYLTPDLLEQQIKEIFELTDAPFQINVFVPLGLEMPPKDQIKKWKENIPLANQVNQFTSVQEEWDDFYQKIDLILKYKVKACSFTFDLPPEDAVKELKTAGCCLIGTASTVEEALLMEERGMDIVVLQGSEAGGHRGAFLPSKGESAVGLMALIPQAADAL---SVPVIAAGGMIDHRGVKAALTLGAQGVQIGSAFLICHESNAHPVHKQKILEANEADTKLTTLF 267
BLAST of CN187747 vs. ExPASy Swiss-Prot
Match: 2NPD_STAAS (Probable 2-nitropropane dioxygenase OS=Staphylococcus aureus (strain MSSA476) GN=SAS0791 PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 7.558e-20 Identity = 55/152 (36.18%), Postives = 89/152 (58.55%), Query Frame = 3 Query: 249 NIKAILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQVGSFDEARKAVNAGVDAIIVQGREAGGH---------VIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRFVASEESYAHPEYKRKLVEMDKTE 677 +I I+ ++V V ++G SE ++ A +K++ S DEA AG+DAI+ QG EAGGH + G ISL+P +VD++ IP+IAAGGI+D RG +A++ LGA+G+ +GT F+ S++S A + ++ +T+ Sbjct: 117 HIDTIIKKQVPVCCFTFGIPSESIIKRLKEANIKLIGTATSVDEAIANEKAGMDAIVAQGSEAGGHRGSFLKPKNQLPMVGTISLVPQIVDVVS---IPVIAAGGIMDGRGVLASIVLGAEGVQMGTAFLTSQDSNASELLRDAIINSKETD 265
BLAST of CN187747 vs. ExPASy Swiss-Prot
Match: 2NPD_STAAR (Probable 2-nitropropane dioxygenase OS=Staphylococcus aureus (strain MRSA252) GN=SAR0883 PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.684e-19 Identity = 54/152 (35.53%), Postives = 89/152 (58.55%), Query Frame = 3 Query: 249 NIKAILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQVGSFDEARKAVNAGVDAIIVQGREAGGH---------VIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRFVASEESYAHPEYKRKLVEMDKTE 677 +I I+ ++V V ++G +E ++ A +K++ S DEA AG+DAI+ QG EAGGH + G ISL+P +VD++ IP+IAAGGI+D RG +A++ LGA+G+ +GT F+ S++S A + ++ +T+ Sbjct: 117 HIDTIIKKQVPVCCFTFGIPNESIIKRLKEANIKLIGTATSVDEAIANEKAGMDAIVAQGSEAGGHRGSFLKPKNQLPMVGTISLVPQIVDVVS---IPVIAAGGIMDGRGVLASIVLGAEGVQMGTAFLTSQDSNASELLRDAIINSKETD 265
BLAST of CN187747 vs. ExPASy Swiss-Prot
Match: 2NPD_STAAN (Probable 2-nitropropane dioxygenase OS=Staphylococcus aureus (strain N315) GN=SA0781 PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 2.199e-19 Identity = 54/152 (35.53%), Postives = 89/152 (58.55%), Query Frame = 3 Query: 249 NIKAILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQVGSFDEARKAVNAGVDAIIVQGREAGGH---------VIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRFVASEESYAHPEYKRKLVEMDKTE 677 +I I+ ++V V ++G +E ++ A +K++ S DEA AG+DAI+ QG EAGGH + G ISL+P +VD++ IP+IAAGGI+D RG +A++ LGA+G+ +GT F+ S++S A + ++ +T+ Sbjct: 117 HIDTIIKKQVPVCCFTFGIPNESIIERLKEANIKLIGTATSVDEAIANEKAGMDAIVAQGSEAGGHRGSFLKPKNQLPMVGTISLVPQIVDVVS---IPVIAAGGIMDGRGVLASIVLGAEGVQMGTAFLTSQDSNASELLRDAIINSKETD 265 The following BLAST results are available for this feature:
BLAST of CN187747 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 15
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Sequences
The
following sequences are available for this feature:
EST sequence >CN187747 ID=CN187747; Name=CN187747; organism=Citrus sinensis; type=EST; length=700bpback to top |