CN187729
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN187729 vs. ExPASy Swiss-Prot
Match: SRG1_ARATH (Protein SRG1 OS=Arabidopsis thaliana GN=SRG1 PE=2 SV=1) HSP 1 Score: 209.92 bits (533), Expect = 1.242e-53 Identity = 101/166 (60.84%), Postives = 132/166 (79.52%), Query Frame = -3 Query: 271 LNIKDEEMREFFEN--GVQAMRMNYYPPCPQPEKVMGLSPHSDAAALTILLQLNEVEGLQVKKDGKWIPVTPLPDAFIVNIGDTLEIITNGTYRSIEHRAVVNSVQERLSVATVYSVRYDGEVYPASSLISEKTPPLFRRMRIEEYFRSRYARELRGKSQLDSLRI 762 L IK EE+ + F++ VQ+MRMNYYPPCPQP++V+GL+PHSD+ LT+L+Q+N+VEGLQ+KKDGKW+PV PLP+AFIVNIGD LEIITNGTYRSIEHR VVNS +ERLS+AT ++V EV PA SL+ + F+R+ ++EY ++R L GK+ LD+LRI Sbjct: 193 LEIKPEELEKLFDDVDSVQSMRMNYYPPCPQPDQVIGLTPHSDSVGLTVLMQVNDVEGLQIKKDGKWVPVKPLPNAFIVNIGDVLEIITNGTYRSIEHRGVVNSEKERLSIATFHNVGMYKEVGPAKSLVERQKVARFKRLTMKEYNDGLFSRTLDGKAYLDALRI 358
BLAST of CN187729 vs. ExPASy Swiss-Prot
Match: NCS1_COPJA (S-norcoclaurine synthase 1 OS=Coptis japonica GN=NCS1 PE=1 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 4.391e-32 Identity = 61/131 (46.56%), Postives = 90/131 (68.70%), Query Frame = -3 Query: 271 MGLSPHSDAAALTILLQLNEVEGLQVKKDGKWIPVTPLPDAFIVNIGDTLEIITNGTYRSIEHRAVVNSVQERLSVATVYSVRYDGEVYPASSLISEKTPPLFRRMRIEEYFRSRYARELRGKSQLDSLRI 663 +GLSPHSDA LT+L+Q+NEV GL +KKD KW+P+ P+ AF+VNIGD +EI++NG Y+SIEHRAV+N+ +ERLS+A + Y ++ P L+ E ++ + E+Y +L GKS LD +++ Sbjct: 223 LGLSPHSDATGLTLLIQVNEVNGLHIKKDEKWVPIKPILGAFVVNIGDVIEIMSNGIYKSIEHRAVINTDKERLSIAAFHDPEYGTKIGPLPDLVKENGVK-YKTIDYEDYLIRSSNIKLDGKSLLDQMKL 352 HSP 2 Score: 28.8758 bits (63), Expect = 4.391e-32 Identity = 13/18 (72.22%), Postives = 14/18 (77.78%), Query Frame = -2 Query: 659 SNEDELLPSMSSAREGYG 712 + EDELLPSMSS EG G Sbjct: 207 NREDELLPSMSSCGEGLG 224
BLAST of CN187729 vs. ExPASy Swiss-Prot
Match: GAOX2_ORYSJ (Gibberellin 20 oxidase 2 OS=Oryza sativa subsp. japonica GN=20ox2 PE=1 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 2.785e-29 Identity = 67/154 (43.51%), Postives = 92/154 (59.74%), Query Frame = -3 Query: 301 LNIKDEEMREFFENGVQAMRMNYYPPCPQPEKVMGLSPHSDAAALTILLQLNEVEGLQVKKDGKWIPVTPLPDAFIVNIGDTLEIITNGTYRSIEHRAVVNSVQERLSVATVYSVRYDGEVYPASSLISEKTPPLFRRMRIEEYFRSRYARELR 762 L ++ REFF + MR NYYPPCP+PE+ +G PH D ALTILLQ ++V GL+V DG+W PV+P+P A ++NIGDT ++NG Y+S HRAVVN +ER S+A R D V P S + + P F + + + Y + R Sbjct: 211 LGVERGYYREFFADSSSIMRCNYYPPCPEPERTLGTGPHCDPTALTILLQ-DDVGGLEVLVDGEWRPVSPVPGAMVINIGDTFMALSNGRYKSCLHRAVVNQRRERRSLAFFLCPREDRVVRPPPSAATPQHYPDFTWADLMRFTQRHYRADTR 363
BLAST of CN187729 vs. ExPASy Swiss-Prot
Match: GAOX2_ORYSI (Gibberellin 20 oxidase 2 OS=Oryza sativa subsp. indica GN=20ox2 PE=1 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 2.785e-29 Identity = 67/154 (43.51%), Postives = 92/154 (59.74%), Query Frame = -3 Query: 301 LNIKDEEMREFFENGVQAMRMNYYPPCPQPEKVMGLSPHSDAAALTILLQLNEVEGLQVKKDGKWIPVTPLPDAFIVNIGDTLEIITNGTYRSIEHRAVVNSVQERLSVATVYSVRYDGEVYPASSLISEKTPPLFRRMRIEEYFRSRYARELR 762 L ++ REFF + MR NYYPPCP+PE+ +G PH D ALTILLQ ++V GL+V DG+W PV+P+P A ++NIGDT ++NG Y+S HRAVVN +ER S+A R D V P S + + P F + + + Y + R Sbjct: 211 LGVERGYYREFFADSSSIMRCNYYPPCPEPERTLGTGPHCDPTALTILLQ-DDVGGLEVLVDGEWRPVSPVPGAMVINIGDTFMALSNGRYKSCLHRAVVNQRRERRSLAFFLCPREDRVVRPPPSAATPQHYPDFTWADLMRFTQRHYRADTR 363
BLAST of CN187729 vs. ExPASy Swiss-Prot
Match: GAO1B_WHEAT (Gibberellin 20 oxidase 1-B OS=Triticum aestivum GN=GA20ox1B PE=2 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 9.907e-27 Identity = 68/174 (39.08%), Postives = 92/174 (52.87%), Query Frame = -3 Query: 256 EVLNIKDEEMREFFENGVQAMRMNYYPPCPQPEKVMGLSPHSDAAALTILLQLNEVEGLQVKKDGKWIPVTPLPDAFIVNIGDTLEIITNGTYRSIEHRAVVNSVQERLSVATVYSVRYDGEVYPASSLISEKTP---PLFRRMRIEEYFRSRYARELRGKSQLDSLRIQHGQG 768 E L + R FFE MR+NYYPPC +P + +G PH D +LTIL Q N V GLQV +G+W + P DAF+VNIGDT ++NG Y+S HRAVVNS R S+A D V P +L+ P P F + ++ + Y +++ S +Q QG Sbjct: 184 ESLGVGRAHYRRFFEGNDSIMRLNYYPPCQRPMETLGTGPHCDPTSLTILHQDN-VGGLQVHTEGRWRSIRPRADAFVVNIGDTFMALSNGRYKSCLHRAVVNSKVPRKSLAFFLCPEMDKVVAPPGTLVDAANPRAYPDFTWRSLLDFTQKHYRADMKTLEVFSSWIVQQQQG 356
BLAST of CN187729 vs. ExPASy Swiss-Prot
Match: GAO1A_WHEAT (Gibberellin 20 oxidase 1-A OS=Triticum aestivum GN=GA20ox1A PE=2 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 1.294e-26 Identity = 68/174 (39.08%), Postives = 92/174 (52.87%), Query Frame = -3 Query: 256 EVLNIKDEEMREFFENGVQAMRMNYYPPCPQPEKVMGLSPHSDAAALTILLQLNEVEGLQVKKDGKWIPVTPLPDAFIVNIGDTLEIITNGTYRSIEHRAVVNSVQERLSVATVYSVRYDGEVYPASSLISEKTP---PLFRRMRIEEYFRSRYARELRGKSQLDSLRIQHGQG 768 E L + R FFE MR+NYYPPC +P + +G PH D +LTIL Q N V GLQV +G+W + P DAF+VNIGDT ++NG Y+S HRAVVNS R S+A D V P +L+ P P F + ++ + Y +++ S +Q QG Sbjct: 184 ESLGVGRAHYRRFFEGNDSIMRLNYYPPCQRPLETLGTGPHCDPTSLTILHQDN-VGGLQVHTEGRWRSIRPRADAFVVNIGDTFMALSNGRYKSCLHRAVVNSRVPRKSLAFFLCPEMDKVVAPPGTLVDASNPRAYPDFTWRSLLDFTQKHYRADMKTLEVFSSWIVQQQQG 356
BLAST of CN187729 vs. ExPASy Swiss-Prot
Match: ACCO_PRUMU (1-aminocyclopropane-1-carboxylate oxidase OS=Prunus mume GN=ACO1 PE=2 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 1.294e-26 Identity = 53/130 (40.77%), Postives = 86/130 (66.15%), Query Frame = -3 Query: 325 RMNYYPPCPQPEKVMGLSPHSDAAALTILLQLNEVEGLQVKKDGKWIPVTPLPDAFIVNIGDTLEIITNGTYRSIEHRAVVNSVQERLSVATVYSVRYDGEVYPASSLI---SEKTPPLFRRMRIEEYFR 705 +++ YPPCP PE + GL H+DA L +L Q ++V GLQ+ KDG+WI V P+ + ++N+GD LE+ITNG YRS+EHR + + R+S+A+ Y+ D +YPA +L+ +E+ ++ + E+Y + Sbjct: 158 KVSNYPPCPNPELIKGLRAHTDAGGLILLFQDDKVSGLQLLKDGQWIDVPPMRHSIVINLGDQLEVITNGKYRSVEHRVIAQTDGTRMSIASFYNPGSDAVIYPAPTLVEKEAEEKNQVYPKFVFEDYMK 287
BLAST of CN187729 vs. ExPASy Swiss-Prot
Match: DV4H_CATRO (Deacetoxyvindoline 4-hydroxylase OS=Catharanthus roseus GN=D4H PE=1 SV=2) HSP 1 Score: 119.398 bits (298), Expect = 2.207e-26 Identity = 60/175 (34.29%), Postives = 100/175 (57.14%), Query Frame = -3 Query: 265 EVLNIKDEEMREFFENGVQAMRMNYYPPCPQPEKVMGLSPHSDAAALTILLQLNEVEGLQVKKDGKWIPVTPLPDAFIVNIGDTLEIITNGTYRSIEHRAVVNSVQERLSVATVYSVRYDGE------VY-PASSLISEKTPPLFRRMRIEEYFRSRYARELRGKSQLDSLRIQH 768 E L +K + E + +YYP CPQPE G S HSD+ LTIL+Q +++ GLQ+ + +WI V +P A ++NI D L++ITN ++S+EHR + N V R+SVA + ++ + +Y P LISE+ PP+++ + ++++ R+A+ S L R+ + Sbjct: 228 EALGLKPNHLEEMDCAEGLILLGHYYPACPQPELTFGTSKHSDSGFLTILMQ-DQIGGLQILLENQWIDVPFIPGALVINIADLLQLITNDKFKSVEHRVLANKVGPRISVAVAFGIKTQTQEGVSPRLYGPIKELISEENPPIYKEVTVKDFITIRFAKRFDDSSSLSPFRLNN 401
BLAST of CN187729 vs. ExPASy Swiss-Prot
Match: FLS_PETHY (Flavonol synthase/flavanone 3-hydroxylase OS=Petunia hybrida GN=FL PE=2 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 6.422e-26 Identity = 56/129 (43.41%), Postives = 84/129 (65.12%), Query Frame = -3 Query: 331 VQAMRMNYYPPCPQPEKVMGLSPHSDAAALTILLQLNEVEGLQVKKDGKWIPVTPLPDAFIVNIGDTLEIITNGTYRSIEHRAVVNSVQERLSVATVYSVRYDGEVYPASSLISEKTPPLFRRMRIEEY 717 V +++NYYPPCP+P+ +G+ H+D + +TIL+ NEV+GLQV KDG W V +P+A IV+IGD +EI++NG Y+S+ HR VN + R+S + EV P L+SE PP F+ + ++Y Sbjct: 211 VYLLKINYYPPCPRPDLALGVVAHTDMSYITILVP-NEVQGLQVFKDGHWYDVKYIPNALIVHIGDQVEILSNGKYKSVYHRTTVNKDKTRMSWPVFLEPPSEHEVGPIPKLLSEANPPKFKTKKYKDY 338
BLAST of CN187729 vs. ExPASy Swiss-Prot
Match: GAO1D_WHEAT (Gibberellin 20 oxidase 1-D OS=Triticum aestivum GN=GA20ox1D PE=1 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 8.387e-26 Identity = 67/173 (38.73%), Postives = 91/173 (52.60%), Query Frame = -3 Query: 259 EVLNIKDEEMREFFENGVQAMRMNYYPPCPQPEKVMGLSPHSDAAALTILLQLNEVEGLQVKKDGKWIPVTPLPDAFIVNIGDTLEIITNGTYRSIEHRAVVNSVQERLSVATVYSVRYDGEVYPASSLISEKTP---PLFRRMRIEEYFRSRYARELRGKSQLDSLRIQHGQ 768 E L + R FFE MR+NYYPPC +P + +G PH D +LTIL Q N V GLQV +G+W + P DAF+VNIGDT ++NG Y+S HRAVVNS R S+A D V P +L+ P P F + ++ + Y +++ S +Q Q Sbjct: 184 ESLGVGRAHYRRFFEGNDSIMRLNYYPPCQRPLETLGTGPHCDPTSLTILHQDN-VGGLQVHTEGRWRSIRPRADAFVVNIGDTFMALSNGRYKSCLHRAVVNSRVPRKSLAFFLCPEMDKVVAPPGTLVDAANPRAYPDFTWRSLLDFTQKHYRADMKTLEVFSSWIVQQQQ 355 The following BLAST results are available for this feature:
BLAST of CN187729 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 85
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Sequences
The
following sequences are available for this feature:
EST sequence >CN187729 ID=CN187729; Name=CN187729; organism=Citrus sinensis; type=EST; length=770bpback to top |