CK937617
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK937617 vs. ExPASy Swiss-Prot
Match: DCE_SOLLC (Glutamate decarboxylase OS=Solanum lycopersicum PE=2 SV=1) HSP 1 Score: 261.922 bits (668), Expect = 2.973e-69 Identity = 127/203 (62.56%), Postives = 160/203 (78.82%), Query Frame = 1 Query: 4 ELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDVGVPLVAFSLKDSSAHTVFEISEGLRKFGWIVPAYTMPANAENVAVLRVVVREDFSRSLVERLISHIEEVLKEIESLPSRVSTKTAHV-IPMVNETQGD--KPLKKSVRETQEEVTRHWKRFVKGRRAGAC 603 ELVFHINYLGSDQPTFTLNFSKGS QIIAQYYQ IRLGFEGYKN+M+NC+ NA+ L EG+ K GRF+I+SKDVGVP+VAFSL+DSS +TVFE+SE LR+FGWIVPAYTMP +AE++AVLRVV+REDFS SL ERL+S IE++L E+++ P R+ TK V V + +GD ETQ+++ +HW++ + +G C Sbjct: 300 ELVFHINYLGSDQPTFTLNFSKGSYQIIAQYYQLIRLGFEGYKNVMKNCLSNAKVLTEGITKMGRFDIVSKDVGVPVVAFSLRDSSKYTVFEVSEHLRRFGWIVPAYTMPPDAEHIAVLRVVIREDFSHSLAERLVSDIEKILSELDTQPPRLPTKAVRVTAEEVRDDKGDGLHHFHMDTVETQKDIIKHWRKIAGKKTSGVC 502
BLAST of CK937617 vs. ExPASy Swiss-Prot
Match: DCE_PETHY (Glutamate decarboxylase OS=Petunia hybrida GN=GAD PE=1 SV=1) HSP 1 Score: 261.151 bits (666), Expect = 5.072e-69 Identity = 128/196 (65.31%), Postives = 157/196 (80.10%), Query Frame = 1 Query: 4 ELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDVGVPLVAFSLKDSSAHTVFEISEGLRKFGWIVPAYTMPANAENVAVLRVVVREDFSRSLVERLISHIEEVLKEIESLPSRVSTKTAHVIPMVNETQGDKPLKKSVRETQEEVTRHWKRFVKGRR 591 EL+FHINYLG+DQPTFTLNFSKGSSQ+IAQYYQ IRLG+EGYKN+MENC NA LREGLEKTGRF I+SK++GVPLVAFSLKD+ H FEISE LR+FGWIVPAYTMP NA+++ VLRVV+REDFSR+L ERL+ IE+VL E+++LP+RV+ K A V G + KK+ E Q E+ WK+FV+ ++ Sbjct: 299 ELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGYEGYKNVMENCQENASVLREGLEKTGRFNIISKEIGVPLVAFSLKDNRQHNEFEISETLRRFGWIVPAYTMPPNAQHITVLRVVIREDFSRTLAERLVRDIEKVLHELDTLPARVNAKLA-VAEEQAAANGSEVHKKTDSEVQLEMITAWKKFVEEKK 493
BLAST of CK937617 vs. ExPASy Swiss-Prot
Match: DCE1_ARATH (Glutamate decarboxylase 1 OS=Arabidopsis thaliana GN=GAD1 PE=1 SV=2) HSP 1 Score: 250.751 bits (639), Expect = 6.855e-66 Identity = 128/205 (62.44%), Postives = 159/205 (77.56%), Query Frame = 1 Query: 4 ELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDVGVPLVAFSLKDSSAHTVFEISEGLRKFGWIVPAYTMPANAENVAVLRVVVREDFSRSLVERLISHIEEVLKEIESLPSRVSTKTAHVIPMVNETQGDK---PLKKSVRETQEEVTRHWKRFVKGRR--AGAC 603 EL+FHINYLG+DQPTFTLNFSKGSSQ+IAQYYQ IRLG EGY+N+MENC N LREGLEKT RF I+SKD GVPLVAFSLKDSS HT FEIS+ LR++GWIVPAYTMP NA+++ VLRVV+REDFSR+L ERL+ IE+V++E++ LPSRV K + + +E+ D +KKS + Q ++ WK+FV R+ +G C Sbjct: 299 ELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGHEGYRNVMENCRENMIVLREGLEKTERFNIVSKDEGVPLVAFSLKDSSCHTEFEISDMLRRYGWIVPAYTMPPNAQHITVLRVVIREDFSRTLAERLVIDIEKVMRELDELPSRVIHKIS-LGQEKSESNSDNLMVTVKKSDIDKQRDIITGWKKFVADRKKTSGIC 502
BLAST of CK937617 vs. ExPASy Swiss-Prot
Match: DCE2_ARATH (Glutamate decarboxylase 2 OS=Arabidopsis thaliana GN=GAD2 PE=1 SV=1) HSP 1 Score: 249.98 bits (637), Expect = 1.169e-65 Identity = 128/202 (63.37%), Postives = 158/202 (78.22%), Query Frame = 1 Query: 4 ELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDVGVPLVAFSLKDSSAHTVFEISEGLRKFGWIVPAYTMPANAENVAVLRVVVREDFSRSLVERLISHIEEVLKEIESLPSRVSTKTAHVIPMVNETQGDKPLKKSVRETQEEVTRHWKRFVKGRRA--GAC 603 EL+FHINYLG+DQPTFTLNFSKGSSQIIAQYYQ IRLGFEGYKN+MENC+ N L+EG+EKT RF I+SKD GVP+VAFSLKD S H FEISE LR+FGWIVPAYTMPA+A+++ VLRVV+REDFSR+L ERL++ I +VL E+++LPS++S K I + E +K ++K E EV W++FVK R+ G C Sbjct: 298 ELIFHINYLGADQPTFTLNFSKGSSQIIAQYYQLIRLGFEGYKNVMENCIENMVVLKEGIEKTERFNIVSKDQGVPVVAFSLKDHSFHNEFEISEMLRRFGWIVPAYTMPADAQHITVLRVVIREDFSRTLAERLVADISKVLHELDTLPSKISKKMG--IEGIAENVKEKKMEK---EILMEVIVGWRKFVKERKKMNGVC 494
BLAST of CK937617 vs. ExPASy Swiss-Prot
Match: DCE_LACLM (Glutamate decarboxylase OS=Lactococcus lactis subsp. cremoris (strain MG1363) GN=gadB PE=1 SV=2) HSP 1 Score: 123.25 bits (308), Expect = 1.651e-27 Identity = 58/145 (40.00%), Postives = 91/145 (62.76%), Query Frame = 1 Query: 4 ELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDVGVPLVAFSLKDSS--AHTVFEISEGLRKFGWIVPAYTMPANAENVAVLRVVVREDFSRSLVERLISHIEEVL 432 EL+F ++YLG + PT +NFS +SQ+I QYY F+R GF+GYK I E A L E +EKTG FEI++ +P+V + LK++S ++++++ L GW VPAY +P N EN + R+V+R DF ++ + ++E + Sbjct: 299 ELIFKVSYLGGELPTMAINFSHSASQLIGQYYNFVRYGFDGYKAIHERTHKVAMYLAEEIEKTGMFEIMNDGAQLPIVCYKLKENSNRGWNLYDLADRLLMKGWQVPAYPLPKNLENEIIQRLVIRADFGMNMAFNYVQDMQEAI 443
BLAST of CK937617 vs. ExPASy Swiss-Prot
Match: DCE_LACLA (Glutamate decarboxylase OS=Lactococcus lactis subsp. lactis GN=gadB PE=1 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 6.272e-27 Identity = 57/148 (38.51%), Postives = 92/148 (62.16%), Query Frame = 1 Query: 4 ELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDVGVPLVAFSLKDSS--AHTVFEISEGLRKFGWIVPAYTMPANAENVAVLRVVVREDFSRSLVERLISHIEEVLKEI 441 EL+F ++YLG + PT +NFS +SQ+I QYY F+R GF+GYK I E A L + +EKTG FEI++ +P+V + LK+ S ++++++ L GW VPAY +P N EN + R+V+R DF ++ + ++E ++ + Sbjct: 299 ELIFKVSYLGGELPTMAINFSHSASQLIGQYYNFVRYGFDGYKAIHERTHKVAMFLAKEIEKTGMFEIMNDGSQLPIVCYKLKEDSNRGWNLYDLADRLLMKGWQVPAYPLPKNLENEIIQRLVIRADFGMNMAFNYVQDMQEAIEAL 446
BLAST of CK937617 vs. ExPASy Swiss-Prot
Match: DCEB_LISIN (Glutamate decarboxylase beta OS=Listeria innocua GN=gadB PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 8.192e-27 Identity = 56/150 (37.33%), Postives = 92/150 (61.33%), Query Frame = 1 Query: 4 ELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDVGVPLVAFSLKDSS--AHTVFEISEGLRKFGWIVPAYTMPANAENVAVLRVVVREDFSRSLVERLISHIEEVLKEIES 447 EL+F ++YLG + PT +NFS+ +S II QYY F+R GFEGY+ I + A+ L +E+TG F+I + +P+V + LKD + T++++++ L+ GW VPAY +P N EN+ + R V R D ++ E I + ++E+ + Sbjct: 297 ELIFKVSYLGGEMPTMQINFSRSASHIIGQYYNFLRYGFEGYRTIHQKTSDVAQYLAHAVEQTGYFDIYNDGSHLPIVCYKLKDDANVKWTLYDLADRLQMRGWQVPAYPLPKNLENIIIQRYVCRADLGFNMAEEFIQDFQASIQELNN 446
BLAST of CK937617 vs. ExPASy Swiss-Prot
Match: DCEB_LISMO (Glutamate decarboxylase beta OS=Listeria monocytogenes GN=gadB PE=3 SV=2) HSP 1 Score: 119.013 bits (297), Expect = 3.113e-26 Identity = 55/150 (36.67%), Postives = 92/150 (61.33%), Query Frame = 1 Query: 4 ELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDVGVPLVAFSLKDSS--AHTVFEISEGLRKFGWIVPAYTMPANAENVAVLRVVVREDFSRSLVERLISHIEEVLKEIES 447 EL+F ++YLG + PT +NFS+ +S II QYY F+R GFEGY+ I + A+ L +E+TG F+I + +P+V + LKD + T++++++ L+ GW VPAY +P + EN+ + R V R D ++ E I + ++E+ + Sbjct: 297 ELIFKVSYLGGEMPTMQINFSRSASHIIGQYYNFLRYGFEGYRTIHQKTSDVAQYLAHAVEQTGYFDIFNDGSHLPIVCYKLKDDANVNWTLYDLADRLQMRGWQVPAYPLPKSLENIIIQRYVCRADLGFNMAEEFIQDFQASIQELNN 446
BLAST of CK937617 vs. ExPASy Swiss-Prot
Match: DCEC_LISIN (Probable glutamate decarboxylase gamma OS=Listeria innocua GN=lin2528 PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 6.935e-26 Identity = 57/149 (38.26%), Postives = 88/149 (59.06%), Query Frame = 1 Query: 4 ELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDVGVPLVAFSLKD--SSAHTVFEISEGLRKFGWIVPAYTMPANAENVAVLRVVVREDFSRSLVERLISHIEEVLKEIE 444 EL+F ++YLG PT +NFS+ +SQII QYY F+R GFEGY+ I E A L + +EK+G FEI++ +P+V + LKD T++++++ L GW VPAY +PA+ + + R V R D ++ E + + L +E Sbjct: 300 ELIFEVSYLGGSMPTMAINFSRSASQIIGQYYNFLRYGFEGYREIHEKTKKTALYLSKTVEKSGYFEIINDGSNLPIVCYKLKDDLDVEWTLYDLADQLLMKGWQVPAYPLPADLSDTIIQRFVCRADLGYNVAEEFAADFADALHNLE 448
BLAST of CK937617 vs. ExPASy Swiss-Prot
Match: DCEA_LISMO (Glutamate decarboxylase alpha OS=Listeria monocytogenes GN=gadA PE=3 SV=2) HSP 1 Score: 117.857 bits (294), Expect = 6.935e-26 Identity = 60/164 (36.59%), Postives = 95/164 (57.93%), Query Frame = 1 Query: 4 ELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDVGVPLVAFSLKDSS--AHTVFEISEGLRKFGWIVPAYTMPANAENVAVLRVVVREDFSRSLVERLISHIEEVLKEIES---LPSRVSTKTAH 480 ELVF ++YLG PT +NFS+ +SQII QYY F+R G+EGY+ I A L + + +TG FEI + +P+V + LKD + A T++++++ L+ GW VPAY +P N + R V R D +++V + + E ++E+ + L V+T H Sbjct: 295 ELVFDVSYLGGHMPTMAINFSRSASQIIGQYYNFLRFGYEGYRQIHMRTRDGALQLSQAVAETGLFEIYNDGANLPIVCYKLKDDANVAWTLYDLADRLQMKGWQVPAYPLPKEMGNTIIQRYVCRGDLGQNMVTAFKNDLSESIEELNNAHILYHDVNTSKTH 458 The following BLAST results are available for this feature:
BLAST of CK937617 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 22
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Sequences
The
following sequences are available for this feature:
EST sequence >CK937617 ID=CK937617; Name=CK937617; organism=Citrus sinensis; type=EST; length=808bpback to top |