CX675335
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX675335 vs. ExPASy Swiss-Prot
Match: DME_ARATH (Transcriptional activator DEMETER OS=Arabidopsis thaliana GN=DME PE=1 SV=2) HSP 1 Score: 375.941 bits (964), Expect = 1.663e-103 Identity = 173/224 (77.23%), Postives = 198/224 (88.39%), Query Frame = -3 Query: 221 YMQENLELQEGDMSKALVALTAGAASIPAPKLKNVSRLRTEHQVYELPDSHPLLRGMEKREPDDPGRYLLAIWTPGETANSIQPPESRCSSQEHGKMCDEKTCFSCNSVRESEFQIVRGTILIPCRTAMRGSFPLNGTYFQVNEVFADHDSSLKPINVPREWLWNLPRRTVYFGTSIPSIFKGLTTEGIQHCFWRGYVCVRGFDQKSRAPRPLMARLHFPASKL 892 +M+ N+ELQEGDMSKALVAL SIP PKLKN+SRLRTEHQVYELPDSH LL GM+KREPDDP YLLAIWTPGETANS QPPE +C + GKMC ++TC CNS+RE+ Q VRGT+LIPCRTAMRGSFPLNGTYFQVNE+FADH+SSLKPI+VPR+W+W+LPRRTVYFGTS+ SIF+GL+TE IQ CFW+G+VCVRGF+QK+RAPRPLMARLHFPASKL Sbjct: 1759 HMERNMELQEGDMSKALVALHPTTTSIPTPKLKNISRLRTEHQVYELPDSHRLLDGMDKREPDDPSPYLLAIWTPGETANSAQPPEQKCGGKASGKMCFDETCSECNSLREANSQTVRGTLLIPCRTAMRGSFPLNGTYFQVNELFADHESSLKPIDVPRDWIWDLPRRTVYFGTSVTSIFRGLSTEQIQFCFWKGFVCVRGFEQKTRAPRPLMARLHFPASKL 1982
BLAST of CX675335 vs. ExPASy Swiss-Prot
Match: ROS1_ARATH (Protein ROS1 OS=Arabidopsis thaliana GN=ROS1 PE=1 SV=2) HSP 1 Score: 367.851 bits (943), Expect = 4.528e-101 Identity = 172/223 (77.13%), Postives = 196/223 (87.89%), Query Frame = -3 Query: 221 MQENLELQEGDMSKALVALTAGAASIPAPKLKNVSRLRTEHQVYELPDSHPLLRGMEKREPDDPGRYLLAIWTPGETANSIQPPESRCSSQEHGKMCDEKTCFSCNSVRESEFQIVRGTILIPCRTAMRGSFPLNGTYFQVNEVFADHDSSLKPINVPREWLWNLPRRTVYFGTSIPSIFKGLTTEGIQHCFWRGYVCVRGFDQKSRAPRPLMARLHFPASKL 889 M+ N ELQ+G+MS ALVALTA AS+P PKLKN+S+LRTEH+VYELPD HPLL +EKREPDDP YLLAIWTPGETA+SIQP S C Q +G +CDE+TCFSCNS++E+ QIVRGTILIPCRTAMRGSFPLNGTYFQVNEVFADH SSL PINVPRE +W LPRRTVYFGTS+P+IFKGL+TE IQ CFW+GYVCVRGFD+K+R P+PL+ARLHFPASKL Sbjct: 1163 MEHNKELQDGNMSSALVALTAETASLPMPKLKNISQLRTEHRVYELPDEHPLLAQLEKREPDDPCSYLLAIWTPGETADSIQPSVSTCIFQANGMLCDEETCFSCNSIKETRSQIVRGTILIPCRTAMRGSFPLNGTYFQVNEVFADHASSLNPINVPRELIWELPRRTVYFGTSVPTIFKGLSTEKIQACFWKGYVCVRGFDRKTRGPKPLIARLHFPASKL 1385
BLAST of CX675335 vs. ExPASy Swiss-Prot
Match: DML2_ARATH (DEMETER-like protein 2 OS=Arabidopsis thaliana GN=DML2 PE=2 SV=1) HSP 1 Score: 233.032 bits (593), Expect = 1.741e-60 Identity = 114/189 (60.32%), Postives = 136/189 (71.96%), Query Frame = -3 Query: 305 QEGDMSKALVALTAGAASIPAPKLKNVSRLRTEHQVYELPDSHPLLRGMEKREPDDPGRYLLAIWTPGETANSIQPPESRCSSQE-HGKMCDEKTCFSCNSVRESEFQIVRGTILIPCRTAMRGSFPLNGTYFQVNEVFADHDSSLKPINVPREWLWNLPRRTVYFGTSIPSIFKGLTTEGIQHCFWRG 868 +E S LV L+ AA+IP KLK +LRTEH V+ELPD H +L G E+RE +D YLLAIWTPGET NSIQPP+ RC+ E + +C+E CF CN RE E Q VRGTILIPCRTAMRG FPLNGTYFQ NEVFADHDSS+ PI+VP E +W+L RR Y G+S+ SI KGL+ E I++ F G Sbjct: 1085 KEAGTSHDLVVLSTYAAAIPRRKLKIKEKLRTEHHVFELPDHHSILEGFERREAEDIVPYLLAIWTPGETVNSIQPPKQRCALFESNNTLCNENKCFQCNKTREEESQTVRGTILIPCRTAMRGGFPLNGTYFQTNEVFADHDSSINPIDVPTELIWDLKRRVAYLGSSVSSICKGLSVEAIKYNFQEG 1273
BLAST of CX675335 vs. ExPASy Swiss-Prot
Match: DML3_ARATH (DEMETER-like protein 3 OS=Arabidopsis thaliana GN=DML3 PE=2 SV=2) HSP 1 Score: 232.261 bits (591), Expect = 2.969e-60 Identity = 117/212 (55.19%), Postives = 147/212 (69.34%), Query Frame = -3 Query: 233 DMSKALVALTAGAASIPAP---KLKNVSRLRTEHQVYELPDSHPLLRGMEKREPDDPGRYLLAIWTPGETANSIQPPESRCSSQEHGKMCDEKTCFSCNSVRESEFQIVRGTILIPCRTAMRGSFPLNGTYFQVNEVFADHDSSLKPINVPREWLWNLPRRTVYFGTSIPSIFKGLTTEGIQHCFWRGYVCVRGFDQKSRAPRPLMARLHFP 859 ++SKALV T A IP K+K +RLRTEH VY LPD+H LL E+R+ DDP YLLAIW PGET++S PP+ +CSS + K+C K C C ++RE I RGTILIPCRTAMRG+FPLNGTYFQ NEVFADH++SL PI RE L +R +Y G+++ SIFK L T I+ CFW G++C+R FD+K R P+ L+ RLH P Sbjct: 820 EISKALVIPTPENACIPIKPPRKMKYYNRLRTEHVVYVLPDNHELLHDFERRKLDDPSPYLLAIWQPGETSSSFVPPKKKCSS-DGSKLCKIKNCSYCWTIREQNSNIFRGTILIPCRTAMRGAFPLNGTYFQTNEVFADHETSLNPIVFRRELCKGLEKRALYCGSTVTSIFKLLDTRRIELCFWTGFLCLRAFDRKQRDPKELVRRLHTP 1030 The following BLAST results are available for this feature:
BLAST of CX675335 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX675335 ID=CX675335; Name=CX675335; organism=Citrus sinensis; type=EST; length=897bpback to top |