CN187086
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN187086 vs. ExPASy Swiss-Prot
Match: NFYA7_ARATH (Nuclear transcription factor Y subunit A-7 OS=Arabidopsis thaliana GN=NFYA7 PE=2 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 9.357e-31 Identity = 78/158 (49.37%), Postives = 96/158 (60.76%), Query Frame = 2 Query: 218 MTSSVHDMSDNSDADEQRKHPESQLQSSTPAMGMSHPSITTPNVQYATHQVGAGHXXXXXXXXXXXXXXRSIFXXXXXXXXXXXXXXXXXMVHLQLMGIQQAGVPLPTDAVEEPVFVNAKQYHGILRRRPSRAKAESENKVLKSRKPYLHESRHLPAL 691 MTSS+H++SDN + E+++ +S Q P+ ++ SI T V G + RSIF VHLQLMG+QQ GVPLP+DAVEEPVFVNAKQYHGILRRR SRA+ ES+NKV+KSRKPYLHESRHL A+ Sbjct: 1 MTSSIHELSDNIGSHEKQEQRDSHFQPPIPS-ARNYESIVTSLVY---SDPGTTNSMAPGQYPYPDPYYRSIFAPPPQPYTG---------VHLQLMGVQQQGVPLPSDAVEEPVFVNAKQYHGILRRRQSRARLESQNKVIKSRKPYLHESRHLHAI 145
BLAST of CN187086 vs. ExPASy Swiss-Prot
Match: NFYA4_ARATH (Nuclear transcription factor Y subunit A-4 OS=Arabidopsis thaliana GN=NFYA4 PE=2 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 4.346e-28 Identity = 73/158 (46.20%), Postives = 94/158 (59.49%), Query Frame = 2 Query: 218 MTSSVHDMSDNSDADEQRKHPESQLQSSTPAMGMSHPSITTPNVQYATHQVGAGHXXXXXXXXXXXXXXRSIFXXXXXXXXXXXXXXXXXMVHLQLMGIQQAGVPLPTDAVEEPVFVNAKQYHGILRRRPSRAKAESENKVLKSRKPYLHESRHLPAL 691 MTSSVH++SDN+++ +++ P+SQ + P+ G S SI T +V G RS+F V LQLMG+QQ GVPL DAVEEPVFVNAKQYHGILRRR SRAK E+ N+ +K++KPY+HESRHL A+ Sbjct: 1 MTSSVHELSDNNESHAKKERPDSQTRPQVPS-GRSSESIDTNSVYSEPMAHGL--------YPYPDPYYRSVFAQQAYLPHPYPG------VQLQLMGMQQPGVPLQCDAVEEPVFVNAKQYHGILRRRQSRAKLEARNRAIKAKKPYMHESRHLHAI 143
BLAST of CN187086 vs. ExPASy Swiss-Prot
Match: NFYA5_ARATH (Nuclear transcription factor Y subunit A-5 OS=Arabidopsis thaliana GN=NFYA5 PE=2 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 9.084e-18 Identity = 44/67 (65.67%), Postives = 53/67 (79.10%), Query Frame = 2 Query: 494 HLQLMGIQQAGVPLPTDAVE-EPVFVNAKQYHGILRRRPSRAKAESENKVLKSRKPYLHESRHLPAL 691 HL++MG+ + VPLP E EP+FVNAKQYH ILRRR RAK E++NK++K RKPYLHESRHL AL Sbjct: 157 HLEMMGLVSSRVPLPHHIQENEPIFVNAKQYHAILRRRKHRAKLEAQNKLIKCRKPYLHESRHLHAL 223
BLAST of CN187086 vs. ExPASy Swiss-Prot
Match: NFYA8_ARATH (Nuclear transcription factor Y subunit A-8 OS=Arabidopsis thaliana GN=NFYA8 PE=2 SV=2) HSP 1 Score: 84.3445 bits (207), Expect = 6.510e-16 Identity = 40/60 (66.67%), Postives = 49/60 (81.67%), Query Frame = 2 Query: 515 QQAGVPLPTDAVE-EPVFVNAKQYHGILRRRPSRAKAESENKVLKSRKPYLHESRHLPAL 691 Q VPLP D +E EPVFVNAKQ+H I+RRR RAK E++NK++K+RKPYLHESRH+ AL Sbjct: 158 QMTRVPLPFDLIENEPVFVNAKQFHAIMRRRQQRAKLEAQNKLIKARKPYLHESRHVHAL 217
BLAST of CN187086 vs. ExPASy Swiss-Prot
Match: NFYA9_ARATH (Nuclear transcription factor Y subunit A-9 OS=Arabidopsis thaliana GN=NFYA9 PE=2 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.110e-15 Identity = 39/61 (63.93%), Postives = 48/61 (78.69%), Query Frame = 2 Query: 509 GIQQAGVPLPTDAVEEPVFVNAKQYHGILRRRPSRAKAESENKVLKSRKPYLHESRHLPAL 691 G+ + +PLP + +EPVFVNAKQY ILRRR +RAKAE E K++KSRKPYLHESRH A+ Sbjct: 151 GMPHSRMPLPPEMAQEPVFVNAKQYQAILRRRQARAKAELEKKLIKSRKPYLHESRHQHAM 211
BLAST of CN187086 vs. ExPASy Swiss-Prot
Match: NFYA6_ARATH (Nuclear transcription factor Y subunit A-6 OS=Arabidopsis thaliana GN=NFYA6 PE=2 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.474e-15 Identity = 41/67 (61.19%), Postives = 51/67 (76.12%), Query Frame = 2 Query: 494 HLQLMGIQQAGVPLPTDAVE-EPVFVNAKQYHGILRRRPSRAKAESENKVLKSRKPYLHESRHLPAL 691 H Q+ G+ + +PLP + E EP+FVNAKQY ILRRR RAK E++NK++K RKPYLHESRHL AL Sbjct: 150 HPQIRGLVPSRMPLPHNIPENEPIFVNAKQYQAILRRRERRAKLEAQNKLIKVRKPYLHESRHLHAL 216
BLAST of CN187086 vs. ExPASy Swiss-Prot
Match: NFYA3_ARATH (Nuclear transcription factor Y subunit A-3 OS=Arabidopsis thaliana GN=NFYA3 PE=2 SV=2) HSP 1 Score: 81.6481 bits (200), Expect = 4.220e-15 Identity = 38/65 (58.46%), Postives = 51/65 (78.46%), Query Frame = 2 Query: 500 QLMGIQQAGVPLPTDAVE-EPVFVNAKQYHGILRRRPSRAKAESENKVLKSRKPYLHESRHLPAL 691 Q++ + VPLP + E +PVFVNAKQYH I+RRR RAK E++NK++++RKPYLHESRH+ AL Sbjct: 160 QMVSMIPGRVPLPAELTETDPVFVNAKQYHAIMRRRQQRAKLEAQNKLIRARKPYLHESRHVHAL 224
BLAST of CN187086 vs. ExPASy Swiss-Prot
Match: NFYA1_ARATH (Nuclear transcription factor Y subunit A-1 OS=Arabidopsis thaliana GN=NFYA1 PE=2 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 4.220e-15 Identity = 38/62 (61.29%), Postives = 47/62 (75.81%), Query Frame = 2 Query: 506 MGIQQAGVPLPTDAVEEPVFVNAKQYHGILRRRPSRAKAESENKVLKSRKPYLHESRHLPAL 691 +G+ + LP D +EPV+VNAKQY GILRRR +RAKAE E KV++ RKPYLHESRH A+ Sbjct: 156 LGMPRERTALPLDMAQEPVYVNAKQYEGILRRRKARAKAELERKVIRDRKPYLHESRHKHAM 217
BLAST of CN187086 vs. ExPASy Swiss-Prot
Match: NFYA_RAT (Nuclear transcription factor Y subunit alpha OS=Rattus norvegicus GN=Nfya PE=1 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 4.828e-11 Identity = 33/57 (57.89%), Postives = 43/57 (75.44%), Query Frame = 2 Query: 527 VPLPTDAV--EEPVFVNAKQYHGILRRRPSRAKAESENKVLKSRKPYLHESRHLPAL 691 +PLP + EEP++VNAKQYH IL+RR +RAK E+E K+ K R+ YLHESRH A+ Sbjct: 246 IPLPGAEMLEEEPLYVNAKQYHRILKRRQARAKLEAEGKIPKERRKYLHESRHRHAM 302
BLAST of CN187086 vs. ExPASy Swiss-Prot
Match: NFYA_MOUSE (Nuclear transcription factor Y subunit alpha OS=Mus musculus GN=Nfya PE=1 SV=2) HSP 1 Score: 68.1662 bits (165), Expect = 4.828e-11 Identity = 33/57 (57.89%), Postives = 43/57 (75.44%), Query Frame = 2 Query: 527 VPLPTDAV--EEPVFVNAKQYHGILRRRPSRAKAESENKVLKSRKPYLHESRHLPAL 691 +PLP + EEP++VNAKQYH IL+RR +RAK E+E K+ K R+ YLHESRH A+ Sbjct: 251 IPLPGAEMLEEEPLYVNAKQYHRILKRRQARAKLEAEGKIPKERRKYLHESRHRHAM 307 The following BLAST results are available for this feature:
BLAST of CN187086 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 13
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CN187086 ID=CN187086; Name=CN187086; organism=Citrus sinensis; type=EST; length=691bpback to top |