CN187015
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN187015 vs. ExPASy Swiss-Prot
Match: VPS16_DICDI (Vacuolar protein sorting-associated protein 16 homolog OS=Dictyostelium discoideum GN=vps16 PE=3 SV=2) HSP 1 Score: 95.5153 bits (236), Expect = 2.920e-19 Identity = 41/84 (48.81%), Postives = 60/84 (71.43%), Query Frame = -1 Query: 442 RAAMKVKTEFKVSEKRWYWLKVFALATKRDWDALERFSKEKRPPIGYRPFVEACVDADEKGEALKYIPKLADPRERAEAYARIG 693 + A +++EFKV +KR++W+K+ AL+ DW+ L +FSKEK+ PIGY PFVE C+D + EALKYIPK+ D + + Y +IG Sbjct: 706 KKAQSIRSEFKVPDKRFWWIKIKALSIMNDWEELMKFSKEKKSPIGYEPFVEVCLDQKNQIEALKYIPKITDILPKIQFYIQIG 789
BLAST of CN187015 vs. ExPASy Swiss-Prot
Match: VPS16_MOUSE (Vacuolar protein sorting-associated protein 16 homolog OS=Mus musculus GN=Vps16 PE=1 SV=2) HSP 1 Score: 79.7221 bits (195), Expect = 1.658e-14 Identity = 36/87 (41.38%), Postives = 57/87 (65.52%), Query Frame = -1 Query: 442 GNHRAAMKVKTEFKVSEKRWYWLKVFALATKRDWDALERFSKEKRPPIGYRPFVEACVDADEKGEALKYIPKLADPRERAEAYARIG 702 G+++ A ++ +F++ +KR +WLK+ ALA DW+ LE+FSK K+ PIGY PFVE C+ K EA KY ++ P ++ +A +G Sbjct: 707 GHNKRAEQLARDFRIPDKRLWWLKLAALADLEDWEELEKFSKSKKSPIGYLPFVEICMKQHNKHEAKKYASRVG-PEQKVKALLLVG 792
BLAST of CN187015 vs. ExPASy Swiss-Prot
Match: VPS16_HUMAN (Vacuolar protein sorting-associated protein 16 homolog OS=Homo sapiens GN=VPS16 PE=1 SV=2) HSP 1 Score: 79.337 bits (194), Expect = 2.166e-14 Identity = 36/87 (41.38%), Postives = 57/87 (65.52%), Query Frame = -1 Query: 442 GNHRAAMKVKTEFKVSEKRWYWLKVFALATKRDWDALERFSKEKRPPIGYRPFVEACVDADEKGEALKYIPKLADPRERAEAYARIG 702 G+++ A ++ +F++ +KR +WLK+ ALA DW+ LE+FSK K+ PIGY PFVE C+ K EA KY ++ P ++ +A +G Sbjct: 707 GHNKRAEQLARDFRIPDKRLWWLKLTALADLEDWEELEKFSKSKKSPIGYLPFVEICMKQHNKYEAKKYASRVG-PEQKVKALLLVG 792
BLAST of CN187015 vs. ExPASy Swiss-Prot
Match: VPS16_BOVIN (Vacuolar protein sorting-associated protein 16 homolog OS=Bos taurus GN=VPS16 PE=2 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 2.829e-14 Identity = 36/87 (41.38%), Postives = 56/87 (64.37%), Query Frame = -1 Query: 442 GNHRAAMKVKTEFKVSEKRWYWLKVFALATKRDWDALERFSKEKRPPIGYRPFVEACVDADEKGEALKYIPKLADPRERAEAYARIG 702 G ++ A ++ +F++ +KR +WLK+ ALA DW+ LE+FSK K+ PIGY PFVE C+ K EA KY ++ P ++ +A +G Sbjct: 707 GQNKRAEQLARDFRIPDKRLWWLKLTALADLEDWEELEKFSKSKKSPIGYLPFVEICMKQHNKYEAKKYASRVG-PEQKVKALLLVG 792 The following BLAST results are available for this feature:
BLAST of CN187015 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CN187015 ID=CN187015; Name=CN187015; organism=Citrus sinensis; type=EST; length=702bpback to top |