CN186653
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN186653 vs. ExPASy Swiss-Prot
Match: RL7A_ORYSJ (60S ribosomal protein L7a OS=Oryza sativa subsp. japonica GN=RPL7A PE=2 SV=1) HSP 1 Score: 189.889 bits (481), Expect = 7.680e-48 Identity = 93/115 (80.87%), Postives = 101/115 (87.83%), Query Frame = -3 Query: 232 AQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKSRLGSIVHKKTASVLCLTTVKNEDKMEFSKILEAIKANFNDKYEELRKKWGGGIMGSKSQXXXXXXXXXXXXXXAQRLT 576 AQLVVIAHDVDPIELVVWLPALCRKME+PYCIVKGK+RLGSIVHKKTASVLCLTTVKNEDK+EFSKILEAIKANFNDK++E+RKKWGGG+MGSKSQ AQR+T Sbjct: 144 AQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKARLGSIVHKKTASVLCLTTVKNEDKLEFSKILEAIKANFNDKFDEVRKKWGGGVMGSKSQAKTKAREKLLAKEAAQRMT 258
BLAST of CN186653 vs. ExPASy Swiss-Prot
Match: RL7A1_ARATH (60S ribosomal protein L7a-1 OS=Arabidopsis thaliana GN=RPL7AA PE=2 SV=2) HSP 1 Score: 187.578 bits (475), Expect = 3.812e-47 Identity = 89/96 (92.71%), Postives = 94/96 (97.92%), Query Frame = -3 Query: 289 AQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKSRLGSIVHKKTASVLCLTTVKNEDKMEFSKILEAIKANFNDKYEELRKKWGGGIMGSKSQ 576 AQLVVIAHDVDPIELVVWLPALCRKME+PYCIVKGKSRLG++VH+KTAS LCLTTVKNEDK+EFSKILEAIKANFNDKYEE RKKWGGGIMGSKSQ Sbjct: 143 AQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKSRLGAVVHQKTASCLCLTTVKNEDKLEFSKILEAIKANFNDKYEEYRKKWGGGIMGSKSQ 238
BLAST of CN186653 vs. ExPASy Swiss-Prot
Match: RL7A2_ARATH (60S ribosomal protein L7a-2 OS=Arabidopsis thaliana GN=RPL7AB PE=2 SV=1) HSP 1 Score: 186.808 bits (473), Expect = 6.502e-47 Identity = 88/96 (91.67%), Postives = 94/96 (97.92%), Query Frame = -3 Query: 289 AQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKSRLGSIVHKKTASVLCLTTVKNEDKMEFSKILEAIKANFNDKYEELRKKWGGGIMGSKSQ 576 AQLVVIAHDVDPIELVVWLPALCRKME+PYCIVKGKSRLG++VH+KTA+ LCLTTVKNEDK+EFSKILEAIKANFNDKYEE RKKWGGGIMGSKSQ Sbjct: 142 AQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKSRLGAVVHQKTAAALCLTTVKNEDKLEFSKILEAIKANFNDKYEEYRKKWGGGIMGSKSQ 237
BLAST of CN186653 vs. ExPASy Swiss-Prot
Match: RL7A_DROME (60S ribosomal protein L7a OS=Drosophila melanogaster GN=RpL7A PE=2 SV=2) HSP 1 Score: 147.132 bits (370), Expect = 5.709e-35 Identity = 66/95 (69.47%), Postives = 82/95 (86.32%), Query Frame = -3 Query: 292 AQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKSRLGSIVHKKTASVLCLTTVKNEDKMEFSKILEAIKANFNDKYEELRKKWGGGIMGSKS 576 AQLVVIAHDVDP+ELV++LPALCRKM +PYCIVKGK+RLG +V +KT + L LTTV N DK F K+LEA+K NFN+++EE+R+ WGGGI+GSKS Sbjct: 157 AQLVVIAHDVDPLELVLFLPALCRKMGVPYCIVKGKARLGRLVRRKTCTTLALTTVDNNDKANFGKVLEAVKTNFNERHEEIRRHWGGGILGSKS 251
BLAST of CN186653 vs. ExPASy Swiss-Prot
Match: RL7A_ICTPU (60S ribosomal protein L7a OS=Ictalurus punctatus GN=rpl7a PE=2 SV=3) HSP 1 Score: 140.969 bits (354), Expect = 4.091e-33 Identity = 63/95 (66.32%), Postives = 79/95 (83.16%), Query Frame = -3 Query: 292 AQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKSRLGSIVHKKTASVLCLTTVKNEDKMEFSKILEAIKANFNDKYEELRKKWGGGIMGSKS 576 AQLVVIAHDVDPIELV++LPALCRKM +PYCIVKGK+RLG +VH+KT + +C T ED+ +K++EAIK N+ND+YEE+R+ WGG IMG KS Sbjct: 152 AQLVVIAHDVDPIELVLFLPALCRKMGVPYCIVKGKARLGRLVHRKTCTSVCFTQTNPEDRAALAKLVEAIKTNYNDRYEEIRRHWGGNIMGPKS 246
BLAST of CN186653 vs. ExPASy Swiss-Prot
Match: RL7A_TAKRU (60S ribosomal protein L7a OS=Takifugu rubripes GN=rpl7a PE=3 SV=3) HSP 1 Score: 139.813 bits (351), Expect = 9.115e-33 Identity = 63/95 (66.32%), Postives = 79/95 (83.16%), Query Frame = -3 Query: 292 AQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKSRLGSIVHKKTASVLCLTTVKNEDKMEFSKILEAIKANFNDKYEELRKKWGGGIMGSKS 576 AQLVVIAHDVDPIELV++LPALCRKM +PYCIVKGK+RLG +VH+KT + + T EDK +K++EAIK N+ND+YEE+R+ WGGGI+G KS Sbjct: 152 AQLVVIAHDVDPIELVIFLPALCRKMGVPYCIVKGKARLGRLVHRKTCTSVAFTQTNPEDKGALAKLVEAIKTNYNDRYEEIRRHWGGGILGPKS 246
BLAST of CN186653 vs. ExPASy Swiss-Prot
Match: RL7A_BOVIN (60S ribosomal protein L7a OS=Bos taurus GN=RPL7A PE=2 SV=3) HSP 1 Score: 139.043 bits (349), Expect = 1.555e-32 Identity = 60/95 (63.16%), Postives = 80/95 (84.21%), Query Frame = -3 Query: 292 AQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKSRLGSIVHKKTASVLCLTTVKNEDKMEFSKILEAIKANFNDKYEELRKKWGGGIMGSKS 576 AQLVVIAHDVDPIELVV+LPALCRKM +PYCI+KGK+RLG +VH+KT + + T V +EDK +K++EAI+ N+ND+Y+E+R+ WGG ++G KS Sbjct: 152 AQLVVIAHDVDPIELVVFLPALCRKMGVPYCIIKGKARLGRLVHRKTCTTVAFTQVNSEDKSALAKLVEAIRTNYNDRYDEIRRHWGGNVLGPKS 246
BLAST of CN186653 vs. ExPASy Swiss-Prot
Match: RL7A_ANOGA (60S ribosomal protein L7a OS=Anopheles gambiae GN=RpL7A PE=3 SV=2) HSP 1 Score: 138.658 bits (348), Expect = 2.031e-32 Identity = 59/95 (62.11%), Postives = 82/95 (86.32%), Query Frame = -3 Query: 292 AQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKSRLGSIVHKKTASVLCLTTVKNEDKMEFSKILEAIKANFNDKYEELRKKWGGGIMGSKS 576 AQLV+IAHDVDPIELVV+LPALCRKM +PYCI+KGK+RLG++V++KT + + LT V+N DK +K++E IK NFND+++++R+ WGGG++G KS Sbjct: 158 AQLVIIAHDVDPIELVVYLPALCRKMGVPYCIIKGKARLGTLVYRKTCTCVALTQVENADKPNLAKLVETIKTNFNDRFDDIRRHWGGGLLGPKS 252
BLAST of CN186653 vs. ExPASy Swiss-Prot
Match: RL7A_RAT (60S ribosomal protein L7a OS=Rattus norvegicus GN=Rpl7a PE=1 SV=2) HSP 1 Score: 138.272 bits (347), Expect = 2.652e-32 Identity = 60/95 (63.16%), Postives = 80/95 (84.21%), Query Frame = -3 Query: 292 AQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKSRLGSIVHKKTASVLCLTTVKNEDKMEFSKILEAIKANFNDKYEELRKKWGGGIMGSKS 576 AQLVVIAHDVDPIELVV+LPALCRKM +PYCI+KGK+RLG +VH+KT + + T V +EDK +K++EAI+ N+ND+Y+E+R+ WGG ++G KS Sbjct: 152 AQLVVIAHDVDPIELVVFLPALCRKMGVPYCIIKGKARLGRLVHRKTCTTVAFTQVNSEDKGALAKLVEAIRTNYNDRYDEIRRHWGGNVLGPKS 246
BLAST of CN186653 vs. ExPASy Swiss-Prot
Match: RL7A_MOUSE (60S ribosomal protein L7a OS=Mus musculus GN=Rpl7a PE=2 SV=2) HSP 1 Score: 138.272 bits (347), Expect = 2.652e-32 Identity = 60/95 (63.16%), Postives = 80/95 (84.21%), Query Frame = -3 Query: 292 AQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKSRLGSIVHKKTASVLCLTTVKNEDKMEFSKILEAIKANFNDKYEELRKKWGGGIMGSKS 576 AQLVVIAHDVDPIELVV+LPALCRKM +PYCI+KGK+RLG +VH+KT + + T V +EDK +K++EAI+ N+ND+Y+E+R+ WGG ++G KS Sbjct: 152 AQLVVIAHDVDPIELVVFLPALCRKMGVPYCIIKGKARLGHLVHRKTCTTVAFTQVNSEDKGALAKLVEAIRTNYNDRYDEIRRHWGGNVLGPKS 246 The following BLAST results are available for this feature:
BLAST of CN186653 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 20
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Sequences
The
following sequences are available for this feature:
EST sequence >CN186653 ID=CN186653; Name=CN186653; organism=Citrus sinensis; type=EST; length=578bpback to top |