CX674971
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX674971 vs. ExPASy Swiss-Prot
Match: SYP31_ARATH (Syntaxin-31 OS=Arabidopsis thaliana GN=SYP31 PE=1 SV=1) HSP 1 Score: 223.787 bits (569), Expect = 1.081e-59 Identity = 118/173 (68.21%), Postives = 134/173 (77.46%), Query Frame = -3 Query: 203 KFFSANALRDSPFRQHAQPVTEPPPWSSPVKASESSQPSALPP--GGVQVGNQLRRRPAVDNAPSHHMEMSMLQQVVPRQENYSQSRAVALHNVESTITELGGIFTHLATMVAQQGELAIRIDDNMDESLANVEGARNALLRHLNQISSNRWLMIKIFAVIIFFLTVFMFFVA 715 + FS DSP + +A+ V EPPPWSS + Q LPP G G+QLRRR A++NAPS MEMS+LQQ VP+QENYSQSRAVALH+VES ITEL GIF LATMV QQGELAIRIDDNMDESL NVEGAR+ALL+HL +ISSNRWLM+KIFAVII FL VF+FFVA Sbjct: 164 QLFSTKNAVDSPPQNNAKSVPEPPPWSSSSNPFGNLQQPLLPPLNTGAPPGSQLRRRSAIENAPSQQMEMSLLQQTVPKQENYSQSRAVALHSVESRITELSGIFPQLATMVTQQGELAIRIDDNMDESLVNVEGARSALLQHLTRISSNRWLMMKIFAVIILFLIVFLFFVA 336 HSP 2 Score: 28.1054 bits (61), Expect = 1.081e-59 Identity = 11/17 (64.71%), Postives = 15/17 (88.24%), Query Frame = -2 Query: 699 TENIKAHESRKQIFFCK 749 +EN+KAHE+RKQ+F K Sbjct: 153 SENMKAHENRKQLFSTK 169
BLAST of CX674971 vs. ExPASy Swiss-Prot
Match: SYP32_ARATH (Syntaxin-32 OS=Arabidopsis thaliana GN=SYP32 PE=2 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 2.473e-35 Identity = 91/187 (48.66%), Postives = 120/187 (64.17%), Query Frame = -3 Query: 203 KLMKAGNKFFSANALRDS--PF-RQH------AQPVTEPPPWSSPVKASESSQPSALPPGGVQVGNQLRRRPAVDNAPSHHMEMSMLQQVVPRQENYSQSRAVALHNVESTITELGGIFTHLATMVAQQGELAIRIDDNMDESLANVEGARNALLRHLNQISSNRWLMIKIFAVIIFFLTVFMFFVA 736 K+ ++ + FS+NA ++S PF RQ A + P PW++ +S SSQ PG + L++ S + QQ+VP Q+ Y Q RA ALH VESTI EL IFT LATMV+QQGE+AIRID NM+++LANVEGA++ L R+LN ISSNRWLM+KIF V+I FL +F+FFVA Sbjct: 170 KVHESRRQLFSSNASKESTNPFVRQRPLAAKAAASESVPLPWANG-SSSSSSQLVPWKPGEGESSPLLQQ--------SQQQQQQQQQQMVPLQDTYMQGRAEALHTVESTIHELSSIFTQLATMVSQQGEIAIRIDQNMEDTLANVEGAQSQLARYLNSISSNRWLMMKIFFVLIAFLMIFLFFVA 347
BLAST of CX674971 vs. ExPASy Swiss-Prot
Match: STX5_BOVIN (Syntaxin-5 OS=Bos taurus GN=STX5 PE=2 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 3.833e-20 Identity = 66/180 (36.67%), Postives = 97/180 (53.89%), Query Frame = -3 Query: 203 KLMKAGNKFFSANALRDSPFRQHAQPVTEPPPWSSPVKASESSQPSALPPGGVQVGNQLRRRP--AVDNAPSHHMEMSMLQQVVPRQENYSQSRAVALHNVESTITELGGIFTHLATMVAQQGELAIRIDDNMDESLANVEGARNALLRHLNQISSNRWLMIKIFAVIIFFLTVFMFFVA 736 KL N F S +R +Q Q +PV A + P+ L G V +G + R A+D S S Q++ Q++Y QSRA + N+ESTI ELG IF LA MV +Q E RID+N+ + +VE A + +L++ ++SNRWLM+KIF ++I F +F+ F+A Sbjct: 182 KLASMSNDFKSVLEVRTENLKQ--QRSRREQFSRAPVSALPLA-PNHLGGGAVVLGAESRASGDVAIDMMDSR---TSQQLQLIDEQDSYIQSRADTMQNIESTIVELGSIFQQLAHMVKEQEETIQRIDENVLGAQLDVEAAHSEILKYFQSVTSNRWLMVKIFLILIVFFIIFVVFLA 355
BLAST of CX674971 vs. ExPASy Swiss-Prot
Match: STX5_DROME (Syntaxin-5 OS=Drosophila melanogaster GN=Syx5 PE=2 SV=2) HSP 1 Score: 98.2117 bits (243), Expect = 5.006e-20 Identity = 46/93 (49.46%), Postives = 63/93 (67.74%), Query Frame = -3 Query: 203 ENYSQSRAVALHNVESTITELGGIFTHLATMVAQQGELAIRIDDNMDESLANVEGARNALLRHLNQISSNRWLMIKIFAVIIFFLTVFMFFVA 481 +NY Q RA + N+ESTI ELGGIF LA MV +Q E+ RID N+ ++ N+E A +L++ +S NRWLMIKIF V+IFF F+ F++ Sbjct: 375 DNYVQQRAETMQNIESTIVELGGIFQQLAHMVKEQEEIVERIDTNVADAELNIEAAHGEILKYFQSVSKNRWLMIKIFGVLIFFFLFFVVFMS 467
BLAST of CX674971 vs. ExPASy Swiss-Prot
Match: STX5_RAT (Syntaxin-5 OS=Rattus norvegicus GN=Stx5 PE=1 SV=2) HSP 1 Score: 97.8265 bits (242), Expect = 6.538e-20 Identity = 64/180 (35.56%), Postives = 97/180 (53.89%), Query Frame = -3 Query: 203 KLMKAGNKFFSANALRDSPFRQHAQPVTEPPPWSSPVKASESSQPSALPPGGVQVGNQLR--RRPAVDNAPSHHMEMSMLQQVVPRQENYSQSRAVALHNVESTITELGGIFTHLATMVAQQGELAIRIDDNMDESLANVEGARNALLRHLNQISSNRWLMIKIFAVIIFFLTVFMFFVA 736 KL N F S +R +Q + +PV A + P+ L G + +G + R R A+D S Q++ Q++Y QSRA + N+ESTI ELG IF LA MV +Q E RID+N+ + +VE A + +L++ ++SNRWLM+KIF ++I F +F+ F+A Sbjct: 182 KLASMSNDFKSVLEVRTENLKQQRNRREQFS--RAPVSALPLA-PNNLGGGPIVLGGESRASRDVAIDMMDPR---TSQQLQLIDEQDSYIQSRADTMQNIESTIVELGSIFQQLAHMVKEQEETIQRIDENVLGAQLDVEAAHSEILKYFQSVTSNRWLMVKIFLILIVFFIIFVVFLA 355
BLAST of CX674971 vs. ExPASy Swiss-Prot
Match: STX5_HUMAN (Syntaxin-5 OS=Homo sapiens GN=STX5 PE=1 SV=2) HSP 1 Score: 97.8265 bits (242), Expect = 6.538e-20 Identity = 65/180 (36.11%), Postives = 97/180 (53.89%), Query Frame = -3 Query: 203 KLMKAGNKFFSANALRDSPFRQHAQPVTEPPPWSSPVKASESSQPSALPPGGVQVG--NQLRRRPAVDNAPSHHMEMSMLQQVVPRQENYSQSRAVALHNVESTITELGGIFTHLATMVAQQGELAIRIDDNMDESLANVEGARNALLRHLNQISSNRWLMIKIFAVIIFFLTVFMFFVA 736 KL N F S +R +Q Q +PV A + P+ L G V +G + + A+D S S Q++ Q++Y QSRA + N+ESTI ELG IF LA MV +Q E RID+N+ + +VE A + +L++ ++SNRWLM+KIF ++I F +F+ F+A Sbjct: 182 KLASMSNDFKSVLEVRTENLKQ--QRSRREQFSRAPVSALPLA-PNHLGGGAVVLGAESHASKDVAIDMMDSR---TSQQLQLIDEQDSYIQSRADTMQNIESTIVELGSIFQQLAHMVKEQEETIQRIDENVLGAQLDVEAAHSEILKYFQSVTSNRWLMVKIFLILIVFFIIFVVFLA 355
BLAST of CX674971 vs. ExPASy Swiss-Prot
Match: STX5_MOUSE (Syntaxin-5 OS=Mus musculus GN=Stx5 PE=2 SV=3) HSP 1 Score: 96.6709 bits (239), Expect = 1.456e-19 Identity = 64/180 (35.56%), Postives = 97/180 (53.89%), Query Frame = -3 Query: 203 KLMKAGNKFFSANALRDSPFRQHAQPVTEPPPWSSPVKASESSQPSALPPGGVQVGNQLR--RRPAVDNAPSHHMEMSMLQQVVPRQENYSQSRAVALHNVESTITELGGIFTHLATMVAQQGELAIRIDDNMDESLANVEGARNALLRHLNQISSNRWLMIKIFAVIIFFLTVFMFFVA 736 KL N F S +R +Q + +PV A + P+ L G + +G + R R A+D S Q++ Q++Y QSRA + N+ESTI ELG IF LA MV +Q E RID+N+ + +VE A + +L++ ++SNRWLM+KIF ++I F +F+ F+A Sbjct: 182 KLASMSNDFKSVLEVRTENLKQQRNRREQFS--RAPVSALPLA-PNNLGGGPIILGAESRASRDVAIDMMDPR---TSQQLQLIDEQDSYIQSRADTMQNIESTIVELGSIFQQLAHMVKEQEETIQRIDENVLGAQLDVEAAHSEILKYFQSVTSNRWLMVKIFLILIVFFIIFVVFLA 355
BLAST of CX674971 vs. ExPASy Swiss-Prot
Match: STX3_CAEEL (Putative syntaxin-3 OS=Caenorhabditis elegans GN=syn-3 PE=2 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 7.228e-19 Identity = 51/149 (34.23%), Postives = 93/149 (62.42%), Query Frame = -3 Query: 206 ASESSQPSALPPG--GVQVGNQLRRRPAVDNAPSHHMEMSML-----QQVVPRQEN---YSQSRAVALHNVESTITELGGIFTHLATMVAQQGELAIRIDDNMDESLANVEGARNALLRHLNQISSNRWLMIKIFAVIIFFLTVFMFFV 622 +S ++ P LP G V ++L + + S ++M L QQ + ++++ Y+Q+R+ + +E +I+ELG IF+ LA++V++QGE+ RID N++++ N++ A + L+R+L IS NRWLMI++F V++ F VF+ F+ Sbjct: 264 SSGAAVPMGLPSSSSGANVRSKLLQDDEQHGSSSIALDMGALSNMQSQQTMQQRDSSLEYAQARSNTMATIEGSISELGQIFSQLASLVSEQGEMITRIDSNVEDTALNIDMAHSELVRYLQNISKNRWLMIQVFGVLMVFFVVFVLFL 412
BLAST of CX674971 vs. ExPASy Swiss-Prot
Match: SED5_SCHPO (Integral membrane protein sed5 OS=Schizosaccharomyces pombe GN=sed5 PE=2 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.968e-16 Identity = 42/109 (38.53%), Postives = 73/109 (66.97%), Query Frame = -3 Query: 215 DNAPSHHMEMSMLQQVVPRQENYSQSRAVALHNVESTITELGGIFTHLATMVAQQGELAIRIDDNMDESLANVEGARNALLRHLNQISSNRWLMIKIFAVIIFFLTVFM 541 D A + + +M++L+ + + YSQ R ++ N+ESTITELGGIF+ LA MV++Q E RID + D+ ++N+ A+ +++ ++SSNR L+ KIF ++I F +++ Sbjct: 201 DGANTRYEQMALLES---QTDTYSQQRMSSIQNIESTITELGGIFSQLAQMVSEQRETVQRIDMHTDDIVSNIGSAQREIVKFYERMSSNRALLFKIFGIVIIFFLLWV 306
BLAST of CX674971 vs. ExPASy Swiss-Prot
Match: SED5_YEAST (Integral membrane protein SED5 OS=Saccharomyces cerevisiae GN=SED5 PE=1 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 9.769e-16 Identity = 39/106 (36.79%), Postives = 66/106 (62.26%), Query Frame = -3 Query: 215 PSHHMEMSMLQQVVPRQENYSQSRAVALHNVESTITELGGIFTHLATMVAQQGELAIRIDDNMDESLANVEGARNALLRHLNQISSNRWLMIKIFAVIIFFLTVFM 532 P + ++ ++++ Y Q R A+ +ESTI E+G +F LA+MV +QGE+ RID N+D+ N+ GA+ LL++ ++I SNRWL K+F +I F +++ Sbjct: 232 PQNDSQLMLMEEGQLSNNVYLQERNRAVETIESTIQEVGNLFQQLASMVQEQGEVIQRIDANVDDIDLNISGAQRELLKYFDRIKSNRWLAAKVFFIIFVFFVIWV 337 The following BLAST results are available for this feature:
BLAST of CX674971 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 10
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX674971 ID=CX674971; Name=CX674971; organism=Citrus sinensis; type=EST; length=750bpback to top |