CN186359
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN186359 vs. ExPASy Swiss-Prot
Match: TBA3_ARATH (Tubulin alpha-3/alpha-5 chain OS=Arabidopsis thaliana GN=TUBA3 PE=2 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 4.189e-38 Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 2 Query: 8 INYQPPTVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK 235 INYQPPTVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK Sbjct: 355 INYQPPTVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK 430
BLAST of CN186359 vs. ExPASy Swiss-Prot
Match: TBA6_MAIZE (Tubulin alpha-6 chain OS=Zea mays GN=TUBA6 PE=2 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 1.219e-37 Identity = 75/76 (98.68%), Postives = 76/76 (100.00%), Query Frame = 2 Query: 8 INYQPPTVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK 235 INYQPP+VVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK Sbjct: 355 INYQPPSVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK 430
BLAST of CN186359 vs. ExPASy Swiss-Prot
Match: TBA5_MAIZE (Tubulin alpha-5 chain OS=Zea mays GN=TUBA5 PE=2 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 1.219e-37 Identity = 75/76 (98.68%), Postives = 76/76 (100.00%), Query Frame = 2 Query: 8 INYQPPTVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK 235 INYQPP+VVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK Sbjct: 355 INYQPPSVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK 430
BLAST of CN186359 vs. ExPASy Swiss-Prot
Match: TBA3_ELEIN (Tubulin alpha-3 chain OS=Eleusine indica GN=TUBA3 PE=2 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 1.219e-37 Identity = 75/76 (98.68%), Postives = 76/76 (100.00%), Query Frame = 2 Query: 8 INYQPPTVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK 235 INYQPP+VVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK Sbjct: 355 INYQPPSVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK 430
BLAST of CN186359 vs. ExPASy Swiss-Prot
Match: TBA1_ORYSJ (Tubulin alpha-1 chain OS=Oryza sativa subsp. japonica GN=TUBA1 PE=1 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 1.219e-37 Identity = 75/76 (98.68%), Postives = 76/76 (100.00%), Query Frame = 2 Query: 8 INYQPPTVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK 235 INYQPP+VVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK Sbjct: 355 INYQPPSVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK 430
BLAST of CN186359 vs. ExPASy Swiss-Prot
Match: TBA1_HORVU (Tubulin alpha-1 chain OS=Hordeum vulgare GN=TUBA1 PE=2 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 1.219e-37 Identity = 75/76 (98.68%), Postives = 76/76 (100.00%), Query Frame = 2 Query: 8 INYQPPTVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK 235 INYQPP+VVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK Sbjct: 355 INYQPPSVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK 430
BLAST of CN186359 vs. ExPASy Swiss-Prot
Match: TBA1_NAEGR (Tubulin alpha-1/2/3 chain OS=Naegleria gruberi GN=TBA1 PE=2 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 2.079e-37 Identity = 74/76 (97.37%), Postives = 76/76 (100.00%), Query Frame = 2 Query: 8 INYQPPTVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK 235 INYQPPTVVPGGDLAKVQRAVCMISN+TA+AEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK Sbjct: 355 INYQPPTVVPGGDLAKVQRAVCMISNSTAIAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK 430
BLAST of CN186359 vs. ExPASy Swiss-Prot
Match: TBA13_NAEGR (Tubulin alpha-13 chain OS=Naegleria gruberi GN=TUBA13 PE=2 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 2.079e-37 Identity = 74/76 (97.37%), Postives = 76/76 (100.00%), Query Frame = 2 Query: 8 INYQPPTVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK 235 INYQPPTVVPGGDLAKVQRAVCMISN+TA+AEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK Sbjct: 355 INYQPPTVVPGGDLAKVQRAVCMISNSTAIAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK 430
BLAST of CN186359 vs. ExPASy Swiss-Prot
Match: TBA1_ARATH (Tubulin alpha-1 chain OS=Arabidopsis thaliana GN=TUBA1 PE=2 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 2.715e-37 Identity = 74/76 (97.37%), Postives = 76/76 (100.00%), Query Frame = 2 Query: 8 INYQPPTVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK 235 INYQPP+VVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMY+KRAFVHWYVGEGMEEGEFSEAREDLAALEK Sbjct: 355 INYQPPSVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALEK 430
BLAST of CN186359 vs. ExPASy Swiss-Prot
Match: TBA_PRUDU (Tubulin alpha chain OS=Prunus dulcis GN=TUBA PE=2 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 3.547e-37 Identity = 74/76 (97.37%), Postives = 76/76 (100.00%), Query Frame = 2 Query: 8 INYQPPTVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK 235 INYQPPTVVPGGDLAKVQRAVCMISN+T+VAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK Sbjct: 355 INYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK 430 The following BLAST results are available for this feature:
BLAST of CN186359 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 145
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Sequences
The
following sequences are available for this feature:
EST sequence >CN186359 ID=CN186359; Name=CN186359; organism=Citrus sinensis; type=EST; length=571bpback to top |