CN186327

Overview
NameCN186327
Unique NameCN186327
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length796
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11738 contig Csv1_Contig11738:564..1359. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN186327 vs. ExPASy Swiss-Prot
Match: AEDO_HUMAN (2-aminoethanethiol dioxygenase OS=Homo sapiens GN=ADO PE=1 SV=2)

HSP 1 Score: 85.1149 bits (209), Expect = 4.852e-16
Identity = 61/181 (33.70%), Postives = 83/181 (45.86%), Query Frame = -1
Query:  314 HECDSFSIGIFCMPPSSMIPLHNHPGMTVLSKLVYGSLHVKSYDWLDL----------PEP--EDPLQ------ARPAKLVKDTDMTAPCGTTVLYPTTGGNIHCFRAIT-PCAIFDILSPPYSADHGRHCTYFR-RSPRRDLSGELEVNGVTVSEVSWLEEFQPPDNFVIRRGHYKGPVI 796
            +E D FS+G+F +   + IPLH+HPGM  + K++YG++ +   D LD           PE   E PLQ       RP  L    + T   G  +L P    N+H   A+  P A  DIL+PPY  D GR C Y+R   P R    E   +   +    WL E    D+F      Y GP +
Sbjct:   91 YETDGFSLGVFLLKSGTSIPLHDHPGMHGMLKVLYGTVRISCMDKLDAGGGQRPRALPPEQQFEPPLQPREREAVRPGVLRSRAEYTEASGPCILTPHR-DNLHQIDAVEGPAAFLDILAPPYDPDDGRDCHYYRVLEPVR--PKEASSSACDLPREVWLLETPQADDFWCEGEPYPGPKV 268          
BLAST of CN186327 vs. ExPASy Swiss-Prot
Match: AEDO_MOUSE (2-aminoethanethiol dioxygenase OS=Mus musculus GN=Ado PE=1 SV=2)

HSP 1 Score: 83.5741 bits (205), Expect = 1.412e-15
Identity = 60/179 (33.52%), Postives = 83/179 (46.37%), Query Frame = -1
Query:  314 HECDSFSIGIFCMPPSSMIPLHNHPGMTVLSKLVYGSLHVKSYDWLDL------PEPED----PLQ------ARPAKLVKDTDMTAPCGTTVLYPTTGGNIHCFRAIT-PCAIFDILSPPYSADHGRHCTYFR-RSPRRDLSGELEVNGVTVSEVSWLEEFQPPDNFVIRRGHYKGPVI 796
            +E + FS+G+F +   + IPLH+HPGM  + K++YG++ +   D LD       P PE     PLQ       RP  L    + T   G  VL P    N+H   A+  P A  DIL+PPY  + GR C Y+R   P R    E   +   +    WL E    D+F      Y GP +
Sbjct:   79 YETEGFSLGVFLLKSGTCIPLHDHPGMHGMLKVLYGTVRISCMDKLDTGAGHRRPPPEQQFEPPLQPLEREAVRPGVLRSRAEYTEASGPCVLTPHR-DNLHQIDAVDGPAAFLDILAPPYDPEDGRDCHYYRVVEPIR--PKEASGSACDLPREVWLLETPQADDFWCEGEPYPGPKV 254          
BLAST of CN186327 vs. ExPASy Swiss-Prot
Match: AEDO_DICDI (Probable 2-aminoethanethiol dioxygenase OS=Dictyostelium discoideum GN=ado-1 PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 7.006e-15
Identity = 51/160 (31.87%), Postives = 76/160 (47.50%), Query Frame = -1
Query:  344 ECDSFSIGIFCMPPSSMIPLHNHPGMTVLSKLVYGSLHVKSYDWLDLPEPEDPLQARPAKLVKDTDMTAPCGTTVLYPT---------TGGNIHCFRA-ITPCAIFDILSPPYSADHGRHCTYFRRSPRRDLSGELEVNGVTVSEVSWLEEFQPPDNFVI 793
            E + F++ IF  PP++ IP H+HP MTVLSK++YGS+   S+DW+D               VK        GT +L               NIH F++    CA+ D+L PPY ++  R CTY+R +          VNG  V  + +  +F   +  +I
Sbjct:   65 ENEKFTLAIFAFPPNTCIPTHDHPQMTVLSKVLYGSISCDSFDWID-----------NTSNVKKQGKAIYTGTNILNSNDEKVKITLPNENNIHRFQSGDEHCAVLDLLYPPYDSNFYRSCTYYRPT---------SVNGSIVDLMPYYPDFDCEEIIII 204          
The following BLAST results are available for this feature:
BLAST of CN186327 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
AEDO_HUMAN4.852e-1633.702-aminoethanethiol dioxygenase OS=Homo sapiens GN=... [more]
AEDO_MOUSE1.412e-1533.522-aminoethanethiol dioxygenase OS=Mus musculus GN=... [more]
AEDO_DICDI7.006e-1531.88Probable 2-aminoethanethiol dioxygenase OS=Dictyos... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS05_0002L17_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0002L17, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN186327 ID=CN186327; Name=CN186327; organism=Citrus sinensis; type=EST; length=796bp
CCCCCTTTTTTAACAAAGGATATTATCTTATTATTGTCATTGAGCAACAA
ATTCACACTTTAATAGCGTCCGCGATGTCTCTCAACTTTCAGTCACTCCC
TCACTACTAACGCGTGAGGTCAGTAAATCAAAAGACTACAATGGTGTATA
ATAATATGTACACGCCCAATGCCTAAATTACATAGCCCCAAAAAAAATTA
TTACCTAGGCTATTGACAACCCATGAACAATTTCCCTTCTATTCCCCATA
ATATGAAGAGCCAATATCATTAGAATGCATGCATGGTACATGAAACAAGA
TTTCTCAAGTTCTAATAACTGGACCCTTGTAATGCCCTCTTCGTATCACA
AAGTTGTCAGGGGGTTGAAACTCTTCTAGCCAGGAAACTTCAGAGACAGT
AACTCCATTCACTTCGAGTTCACCTGAAAGATCCCTTCTTGGAGATCTCC
GGAAATAAGTGCAGTGTCGCCCATGATCTGCCGAGTATGGAGGGGAGAGT
ATATCAAAGATAGCACAGGGAGTTATGGCTCTGAAACAATGAATGTTCCC
TCCGGTTGTGGGATAAAGAACTGTCGTCCCACAAGGGGCTGTCATATCTG
TATCTTTAACAAGCTTCGCAGGTCTTGCTTGCAATGGATCTTCAGGCTCA
GGCAAATCAAGCCAATCATATGACTTGACATGTAAGGAACCATAGACAAG
CTTGCTCAAAACAGTCATTCCTGGATGATTATGAAGGGGTATCATGGAGG
ATGGTGGCATACAGAAAATACCTATAGAGAAGCTGTCACATTCATG
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