EY665737

Overview
NameEY665737
Unique NameEY665737
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length876
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY665737_ssr550 microsatellite EY665737_ssr550:550..561. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
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BLAST of EY665737 vs. ExPASy Swiss-Prot
Match: ABAH2_ARATH (Abscisic acid 8'-hydroxylase 2 OS=Arabidopsis thaliana GN=CYP707A2 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.201e-11
Identity = 32/49 (65.31%), Postives = 40/49 (81.63%), Query Frame = -3 
Query:  311 QVIQETLRTSSILSFNFKEAVQDVEFEGYIIPRGWKVLP---HIHQMEE 448
            +VIQETLR +S+LSF F+EAVQDVE++GY+IP+GWKVLP    IH   E
Sbjct:  351 RVIQETLRAASVLSFTFREAVQDVEYDGYLIPKGWKVLPLFRRIHHSSE 399
[Close]
BLAST of EY665737 vs. ExPASy Swiss-Prot
Match: ABAH1_ARATH (Abscisic acid 8'-hydroxylase 1 OS=Arabidopsis thaliana GN=CYP707A1 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.180e-11
Identity = 30/39 (76.92%), Postives = 37/39 (94.87%), Query Frame = -3 
Query:  332 QVIQETLRTSSILSFNFKEAVQDVEFEGYIIPRGWKVLP 448
            +VIQETLR +SILSF F+EAV+DVE+EGY+IP+GWKVLP
Sbjct:  331 RVIQETLRVASILSFTFREAVEDVEYEGYLIPKGWKVLP 369
[Close]
BLAST of EY665737 vs. ExPASy Swiss-Prot
Match: ABAH3_ARATH (Abscisic acid 8'-hydroxylase 3 OS=Arabidopsis thaliana GN=CYP707A3 PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 9.313e-11
Identity = 29/39 (74.36%), Postives = 37/39 (94.87%), Query Frame = -3 
Query:  332 QVIQETLRTSSILSFNFKEAVQDVEFEGYIIPRGWKVLP 448
            +VIQETLR ++ILSF F+EAV+DVE+EGY+IP+GWKVLP
Sbjct:  331 RVIQETLRAATILSFTFREAVEDVEYEGYLIPKGWKVLP 369
The following BLAST results are available for this feature:
BLAST of EY665737 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
ABAH2_ARATH3.201e-1165.31Abscisic acid 8'-hydroxylase 2 OS=Arabidopsis thal... [more]
ABAH1_ARATH4.180e-1176.92Abscisic acid 8'-hydroxylase 1 OS=Arabidopsis thal... [more]
ABAH3_ARATH9.313e-1174.36Abscisic acid 8'-hydroxylase 3 OS=Arabidopsis thal... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-102-095-A07-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665737 ID=EY665737; Name=EY665737; organism=Citrus sinensis; type=EST; length=876bp
AAAATCCCTAAAATCTAACTCCTTCATTTCCGTAAGCGGCGTCAGCACCC
TCACTCACCGTCACCGTGCCAGCTTCTCACTGTTCTCGCCGCCGGCAGCC
AACAGCGCATCCAGATTCCATCAGCCAGCATCTCCCGCGCAACCCACCGT
CCAGCCACCTGGCCCACCCAGCATCTCCCGCGCGACGCAGCAGCGAACCC
CACCCACAAGCACAGCTGCGCGACGCTGCAGCAACCACGTAATATTTGAA
TTAATTTTCTCGTTCTGCTTTAATTTCTCTGCAACCTACTGACTGCCTTC
TGCTTCTAGTTTCCTCCATTTGATGTATGTGAGGAAGCACTTTCCAACCT
CTAGGGATTATATAGCCTTCAAATTCTACATCTTGTACAGCTTCTTTAAA
ATTGAATGAGAGTATGCTTGATGTTCTTAAAGTCTCTTGAATCACCTGGG
GAAAAAAAATGTATATTTATTCCCATCTTGACTTTATACTTGCCTTTGGC
TTTTTGTTTGCTTTGCAAGCGGATATGGTGGCTATTTATCCACTTGGTGT
TTCTTTCTTTCATATTCTGTCTCAGATGCATTAGAAAAGAAATTAGGATG
ATAAATGCAATTGTTAATTTCAAAGCAATTAAAAATGGAGATAGTAGCAG
CAAATTGCAGAGGGCTAAAAATTAAATAGGCCGGGAAGGAAAAAGAGAGG
GATTTAAAGAATTTCATATAAAATTTTTTTTTTATATGAAAATTTGATTA
ATTGTCCAAAAAAAAATTGGAGGAGAAACGCTGGCAGCAACCCTATAAAA
AATTTTAAAATTTAAAAGTTTTAATTAAAAAAATTATTTAAAAATTTGGG
TTGGAAAGCCCCGGCCCCCGGGTCAA
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