EY665731
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY665731 vs. ExPASy Swiss-Prot
Match: KDM3B_MOUSE (Lysine-specific demethylase 3B OS=Mus musculus GN=Kdm3b PE=1 SV=2) HSP 1 Score: 95.5153 bits (236), Expect = 4.075e-19 Identity = 51/131 (38.93%), Postives = 71/131 (54.20%), Query Frame = 3 Query: 96 PEMLKLKDWPPSDKFEDLMPRHCDEFISALPFQEYSDPRAGILNLAVKLPSGVLKPDLGPKTYIAYGVAEELGRGDSVTKLHCDMSDAVNIXXXXXXXXXXXXQHSAVERLKKEHRAQDLKENLVQDGMDE 488 P +LKLKDWPP + F D+MP ++ + LP EY+ R G LNLA +LPS ++PDLGPK Y AYG+ R T LH D+SDAVN+ V + E A ++ + + DG ++ Sbjct: 1281 PMVLKLKDWPPGEDFRDMMPTRFEDLMENLPLPEYTK-RDGRLNLASRLPSYFVRPDLGPKMYNAYGLITAEDRRVGTTNLHLDVSDAVNVMVYVGIPVGEGAHDEEVLKTIDEGDADEVTKQRIHDGKEK 1410
BLAST of EY665731 vs. ExPASy Swiss-Prot
Match: KDM3B_HUMAN (Lysine-specific demethylase 3B OS=Homo sapiens GN=KDM3B PE=1 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 4.075e-19 Identity = 51/131 (38.93%), Postives = 71/131 (54.20%), Query Frame = 3 Query: 96 PEMLKLKDWPPSDKFEDLMPRHCDEFISALPFQEYSDPRAGILNLAVKLPSGVLKPDLGPKTYIAYGVAEELGRGDSVTKLHCDMSDAVNIXXXXXXXXXXXXQHSAVERLKKEHRAQDLKENLVQDGMDE 488 P +LKLKDWPP + F D+MP ++ + LP EY+ R G LNLA +LPS ++PDLGPK Y AYG+ R T LH D+SDAVN+ V + E A ++ + + DG ++ Sbjct: 1480 PMVLKLKDWPPGEDFRDMMPTRFEDLMENLPLPEYTK-RDGRLNLASRLPSYFVRPDLGPKMYNAYGLITAEDRRVGTTNLHLDVSDAVNVMVYVGIPIGEGAHDEEVLKTIDEGDADEVTKQRIHDGKEK 1609
BLAST of EY665731 vs. ExPASy Swiss-Prot
Match: KDM3A_HUMAN (Lysine-specific demethylase 3A OS=Homo sapiens GN=KDM3A PE=1 SV=3) HSP 1 Score: 92.4337 bits (228), Expect = 3.450e-18 Identity = 50/120 (41.67%), Postives = 67/120 (55.83%), Query Frame = 3 Query: 42 TRQFFKGYTQGRTYDNFW-----------PEMLKLKDWPPSDKFEDLMPRHCDEFISALPFQEYSDPRAGILNLAVKLPSGVLKPDLGPKTYIAYGVAEELGRGDSVTKLHCDMSDAVNI 368 T + G T G +D F P +LKLKDWPP + F D+MP D+ ++ +P EY+ R G LNLA +LP+ ++PDLGPK Y AYG+ R T LH D+SDA N+ Sbjct: 1011 TNEIITGATVGDFWDGFEDVPNRLKNEKEPMVLKLKDWPPGEDFRDMMPSRFDDLMANIPLPEYTR-RDGKLNLASRLPNYFVRPDLGPKMYNAYGLITPEDRKYGTTNLHLDVSDAANV 1129
BLAST of EY665731 vs. ExPASy Swiss-Prot
Match: KDM3A_CHICK (Lysine-specific demethylase 3A OS=Gallus gallus GN=KDM3A PE=2 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 3.450e-18 Identity = 50/121 (41.32%), Postives = 66/121 (54.55%), Query Frame = 3 Query: 42 TRQFFKGYTQGRTYDNFW------------PEMLKLKDWPPSDKFEDLMPRHCDEFISALPFQEYSDPRAGILNLAVKLPSGVLKPDLGPKTYIAYGVAEELGRGDSVTKLHCDMSDAVNI 368 T + G T G +D F P +LKLKDWPP + F D+MP D+ + +P EY+ R G LNLA +LP+ ++PDLGPK Y AYG+ R T LH D+SDA N+ Sbjct: 1014 TNEIITGATVGDFWDGFEDISSRLRTEEGEPMVLKLKDWPPGEDFRDMMPSRFDDLMKNIPLPEYTR-RGGKLNLASRLPNYFVRPDLGPKMYNAYGLITPEDRKYGTTNLHLDVSDAANV 1133
BLAST of EY665731 vs. ExPASy Swiss-Prot
Match: KDM3A_RAT (Lysine-specific demethylase 3A OS=Rattus norvegicus GN=Kdm3a PE=2 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 5.885e-18 Identity = 50/122 (40.98%), Postives = 67/122 (54.92%), Query Frame = 3 Query: 42 TRQFFKGYTQGRTYDNFW-------------PEMLKLKDWPPSDKFEDLMPRHCDEFISALPFQEYSDPRAGILNLAVKLPSGVLKPDLGPKTYIAYGVAEELGRGDSVTKLHCDMSDAVNI 368 T + G T G +D F P +LKLKDWPP + F D+MP D+ ++ +P EY+ R G LNLA +LP+ ++PDLGPK Y AYG+ R T LH D+SDA N+ Sbjct: 895 TNEIITGATVGDFWDGFEDVPNRLKNEKEKEPMVLKLKDWPPGEDFRDMMPSRFDDLMANIPLPEYTR-RDGKLNLASRLPNYFVRPDLGPKMYNAYGLITPEDRKYGTTNLHLDVSDAANV 1015
BLAST of EY665731 vs. ExPASy Swiss-Prot
Match: KDM3A_MOUSE (Lysine-specific demethylase 3A OS=Mus musculus GN=Kdm3a PE=1 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 5.885e-18 Identity = 50/122 (40.98%), Postives = 67/122 (54.92%), Query Frame = 3 Query: 42 TRQFFKGYTQGRTYDNFW-------------PEMLKLKDWPPSDKFEDLMPRHCDEFISALPFQEYSDPRAGILNLAVKLPSGVLKPDLGPKTYIAYGVAEELGRGDSVTKLHCDMSDAVNI 368 T + G T G +D F P +LKLKDWPP + F D+MP D+ ++ +P EY+ R G LNLA +LP+ ++PDLGPK Y AYG+ R T LH D+SDA N+ Sbjct: 1011 TNEIITGATVGDFWDGFEDVPNRLKNDKEKEPMVLKLKDWPPGEDFRDMMPSRFDDLMANIPLPEYTR-RDGKLNLASRLPNYFVRPDLGPKMYNAYGLITPEDRKYGTTNLHLDVSDAANV 1131
BLAST of EY665731 vs. ExPASy Swiss-Prot
Match: KD3AA_XENLA (Lysine-specific demethylase 3A-A OS=Xenopus laevis GN=kdm3a-A PE=2 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 7.194e-16 Identity = 46/118 (38.98%), Postives = 64/118 (54.24%), Query Frame = 3 Query: 102 MLKLKDWPPSDKFEDLMPRHCDEFISALPFQEYSDPRAGILNLAVKLPSGVLKPDLGPKTYIAYGVAEELGRGDSVTKLHCDMSDAVNIXXXXXXXXXXXXQHSAVERLKKEHRAQDL 455 +LKLKDWPP + F D M ++ ++ +P EY+ R G LNLA +LP+ ++PDLGPK Y AYG+ R T LH D+SDA N+ Q V R ++ A +L Sbjct: 1052 VLKLKDWPPGEDFRDTMLSRFEDLMNNIPLPEYTR-REGKLNLAARLPAYFVRPDLGPKMYNAYGLITPEDRKYGTTNLHLDVSDATNVMVYVGIPKGEHDQEQEVIRTIQDGDADEL 1168
BLAST of EY665731 vs. ExPASy Swiss-Prot
Match: KD3AB_XENLA (Lysine-specific demethylase 3A-B OS=Xenopus laevis GN=kdm3a-B PE=2 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 9.395e-16 Identity = 46/118 (38.98%), Postives = 64/118 (54.24%), Query Frame = 3 Query: 102 MLKLKDWPPSDKFEDLMPRHCDEFISALPFQEYSDPRAGILNLAVKLPSGVLKPDLGPKTYIAYGVAEELGRGDSVTKLHCDMSDAVNIXXXXXXXXXXXXQHSAVERLKKEHRAQDL 455 +LKLKDWPP + F D M ++ ++ +P EY+ R G LNLA +LP+ ++PDLGPK Y AYG+ R T LH D+SDA N+ Q V R ++ A +L Sbjct: 1055 VLKLKDWPPGEDFRDTMLSRFEDLMNNIPLPEYTR-REGKLNLAARLPTYFVRPDLGPKMYNAYGLITPEDRKYGTTNLHLDVSDAANVMVYVGIPKGEHDQDQEVLRTIQDGDADEL 1171
BLAST of EY665731 vs. ExPASy Swiss-Prot
Match: JHD2C_HUMAN (Probable JmjC domain-containing histone demethylation protein 2C OS=Homo sapiens GN=JMJD1C PE=1 SV=2) HSP 1 Score: 77.7962 bits (190), Expect = 8.794e-14 Identity = 38/89 (42.70%), Postives = 52/89 (58.43%), Query Frame = 3 Query: 102 MLKLKDWPPSDKFEDLMPRHCDEFISALPFQEYSDPRAGILNLAVKLPSGVLKPDLGPKTYIAYGVAEELGRGDSVTKLHCDMSDAVNI 368 +LKLKDWP + F+ +MP ++ + +LP EY +P G NLA LP ++PDLGP+ AYGV T LH ++SD VNI Sbjct: 2258 VLKLKDWPSGEDFKTMMPARYEDLLKSLPLPEYCNPE-GKFNLASHLPGFFVRPDLGPRLCSAYGVVAAKDHDIGTTNLHIEVSDVVNI 2345
BLAST of EY665731 vs. ExPASy Swiss-Prot
Match: JHD2C_MOUSE (Probable JmjC domain-containing histone demethylation protein 2C OS=Mus musculus GN=Jmjd1c PE=1 SV=2) HSP 1 Score: 74.3294 bits (181), Expect = 9.723e-13 Identity = 38/89 (42.70%), Postives = 51/89 (57.30%), Query Frame = 3 Query: 102 MLKLKDWPPSDKFEDLMPRHCDEFISALPFQEYSDPRAGILNLAVKLPSGVLKPDLGPKTYIAYGVAEELGRGDSVTKLHCDMSDAVNI 368 +LKLKD P + F+ +MP ++F+ LP EY +P G NLA LP ++PDLGP+ AYGVA T LH + SD VN+ Sbjct: 2068 VLKLKDCPSGEDFKAMMPTRYEDFLRCLPLPEYCNPE-GKFNLASHLPGFFVRPDLGPRLCSAYGVAAAKDHDIGTTNLHIEASDVVNV 2155 The following BLAST results are available for this feature:
BLAST of EY665731 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 10
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY665731 ID=EY665731; Name=EY665731; organism=Citrus sinensis; type=EST; length=865bpback to top |