CN186190
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN186190 vs. ExPASy Swiss-Prot
Match: R3HD2_MOUSE (R3H domain-containing protein 2 OS=Mus musculus GN=R3hdm2 PE=2 SV=2) HSP 1 Score: 73.9442 bits (180), Expect = 8.347e-13 Identity = 63/223 (28.25%), Postives = 106/223 (47.53%), Query Frame = 1 Query: 19 FLVEALQ-NPRHRLTILRMELDIQRFLQNPDQQHFEFQHFP--TSYLRLAAHRVSQHYGLVTMVQETGIEGLGNRILVRKTAESKYPAVRLSEIPAKQSEESDKLEKIKIAIRRRPNAGCVNGANETGTKRSPVR---SVEERKEEYDRARARIFSGPSSPNSEDTLTQVSTDMKNIGFNRDEREIVRNSITDAEKIISIRDGAGLSRVAIFRDREKDRTDPD 669 FLV L+ NPR R+ +L++E +I F+ + + Q F+ FP TSY R+ HRV+ ++G+ V +TG +++ KT+ ++ P R SE ++ E + I +R +A N+ R S+EER+EEY R R RIF+ + N ++S + + ++ R+I R + + S R + S + R TD D Sbjct: 157 FLVNTLKKNPRDRMMLLKLEQEILDFINDNNNQ---FKKFPQMTSYHRMLLHRVAAYFGMDHNVDQTG-----KAVIINKTSSTRIPEQRFSE----HIKDEKNTEFQQRFILKRDDASMDRDDNQMRVPLQDGRRSKSIEEREEEYQRVRERIFARETGQNGYLNDIRLSKEAFSSSSHK-RRQIFRGNREGLSRTSSSRQSSTDSELKSLEPRPWSSTDSD 366
BLAST of CN186190 vs. ExPASy Swiss-Prot
Match: R3HD1_HUMAN (R3H domain-containing protein 1 OS=Homo sapiens GN=R3HDM1 PE=1 SV=3) HSP 1 Score: 72.7886 bits (177), Expect = 1.860e-12 Identity = 57/187 (30.48%), Postives = 94/187 (50.27%), Query Frame = 1 Query: 19 FLVEALQN-PRHRLTILRMELDIQRFLQNPDQQHFEFQHFPTSYLRLAAHRVSQHYGLVTMVQETGIEGLGNRILVRKTAESKYPAVRLSEIPAKQSEESDKLEKI-KIAIRRRPNAGCVNGANETGTKRSPVR---SVEERKEEYDRARARIFSGPSSPNSEDTLTQVSTDMKNIGFNRDEREIVR 564 FLV L+N PR R+ +L++E +I F+ N + +F TSY R+ HRV+ ++GL + ++ G ++V KT+ ++ P + +E + DK E K I +R N+ N+ + R S+EER+EEY RAR RIFS S + E+ + ++ + R+I R Sbjct: 156 FLVNTLKNNPRDRMMLLKLEQEILDFIGNNESPRKKFPPM-TSYHRMLLHRVAAYFGL-----DHNVDQSGKSVIVNKTSNTRIPDQKFNE-----HIKDDKGEDFQKRYILKRDNSSFDKDDNQMRIRLKDDRRSKSIEEREEEYQRARDRIFSQDSLCSQENYIIDKRLQDEDASSTQQRRQIFR 331
BLAST of CN186190 vs. ExPASy Swiss-Prot
Match: R3HD2_BOVIN (R3H domain-containing protein 2 OS=Bos taurus GN=R3HDM2 PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 7.066e-12 Identity = 52/162 (32.10%), Postives = 84/162 (51.85%), Query Frame = 1 Query: 19 FLVEALQ-NPRHRLTILRMELDIQRFLQNPDQQHFEFQHFP--TSYLRLAAHRVSQHYGLVTMVQETGIEGLGNRILVRKTAESKYPAVRLSEIPAKQSEESDKLEKIKIAIRRRPNAGCVNGANETGTKRSPVR---SVEERKEEYDRARARIFSGPSSPN 486 FLV L+ NPR R+ +L++E +I F+ + + Q F+ FP TSY R+ HRV+ ++G+ V +TG +++ KT+ ++ P R SE ++ E + I +R +A N+ R S+EER+EEY R R RIF+ + N Sbjct: 157 FLVNTLKKNPRDRMMLLKLEQEILDFINDNNNQ---FKKFPQMTSYHRMLLHRVAAYFGMDHNVDQTG-----KAVIINKTSNTRIPEQRFSE----HIKDEKNTEFQQRFILKRDDASMDRDDNQIRVPLQDGRRSKSIEEREEEYQRVRERIFARETGQN 306
BLAST of CN186190 vs. ExPASy Swiss-Prot
Match: ARP21_MOUSE (cAMP-regulated phosphoprotein 21 OS=Mus musculus GN=Arpp21 PE=1 SV=2) HSP 1 Score: 70.4774 bits (171), Expect = 9.229e-12 Identity = 55/190 (28.95%), Postives = 101/190 (53.16%), Query Frame = 1 Query: 19 FLVEALQN-PRHRLTILRMELDIQRFLQNPDQQHFEFQHFPTSYLRLAAHRVSQHYGLVTMVQETGIEGLGNRILVRKTAESKYPAVRLSE-IPAKQSEESDK---LEKIKIAIRRRPNAGCVNGANETGTKRSPVRSVEERKEEYDRARARIFSGPSSPNSEDTL---TQVSTDMKNIGFNRDEREIVR 564 FL+ L+N R R+ +L+ME ++ F+ + + + +F +SY R+ HRV+ ++GL V +TG +++ KT+ ++ P R E + ++SEES K L++ +I + N ++ + +RS +S+EER+EEY R R RIF+ S + E +++ DM +R++ R Sbjct: 151 FLINTLKNNSRDRMILLKMEQEMIDFIADSNNHYKKFPQM-SSYQRMLVHRVAAYFGLDHNVDQTG-----KSVIINKTSSTRIPEQRFCEHLKDEKSEESQKRFILKRDNSSIDKEDNQNRMHPFRDD--RRS--KSIEEREEEYQRVRERIFAHDSVCSQESLFLDNSRLQEDMHICNETYKKRQLFR 330
BLAST of CN186190 vs. ExPASy Swiss-Prot
Match: ARP21_HUMAN (cAMP-regulated phosphoprotein 21 OS=Homo sapiens GN=ARPP21 PE=1 SV=2) HSP 1 Score: 68.5514 bits (166), Expect = 3.507e-11 Identity = 53/173 (30.64%), Postives = 88/173 (50.87%), Query Frame = 1 Query: 19 FLVEALQN-PRHRLTILRMELDIQRFLQNPDQQHFEFQHFPTSYLRLAAHRVSQHYGLVTMVQETGIEGLGNRILVRKTAESKYPAVRLSE-IPAKQSEESDKLEKIKIAIRRRPNAGCVNGANETGTKRSPVR------SVEERKEEYDRARARIFSGPSSPNSEDTLTQVS 513 FL+ L+N R R+ +L+ME +I F+ + + + +F +SY R+ HRV+ ++GL V +TG +++ KT+ ++ P R E + ++ EES K I +R N+ N+ + P R S+EER+EEY R R RIF+ S + E + S Sbjct: 152 FLINTLKNNSRDRMILLKMEQEIIDFIADNNNHYKKFPQM-SSYQRMLVHRVAAYFGLDHNVDQTG-----KSVIINKTSSTRIPEQRFCEHLKDEKGEESQKR-----FILKRDNSSIDKEDNQQN-RMHPFRDDRRSKSIEEREEEYQRVRERIFAHDSVCSQESLFVENS 312 The following BLAST results are available for this feature:
BLAST of CN186190 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CN186190 ID=CN186190; Name=CN186190; organism=Citrus sinensis; type=EST; length=673bpback to top |