CV886715
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CV886715 vs. ExPASy Swiss-Prot
Match: RS25_SOLLC (40S ribosomal protein S25 OS=Solanum lycopersicum GN=RPS25 PE=3 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 5.310e-30 Identity = 64/72 (88.89%), Postives = 72/72 (100.00%), Query Frame = 2 Query: 158 VNNMVLFDQATYDKLLSEAPKFKLITPSILSDRLRINGSLARRAIKDLMARGSIRMISAHASQQIYTRATNT 373 VNNMVLFD++TYDKLLSEAPK+KLITPS+LSDRLRI+GSLAR+AI+DLMARGSIRM+SAHASQQIYTRATNT Sbjct: 37 VNNMVLFDKSTYDKLLSEAPKYKLITPSVLSDRLRISGSLARKAIRDLMARGSIRMVSAHASQQIYTRATNT 108
BLAST of CV886715 vs. ExPASy Swiss-Prot
Match: RS253_ARATH (40S ribosomal protein S25-3 OS=Arabidopsis thaliana GN=RPS25D PE=3 SV=2) HSP 1 Score: 129.413 bits (324), Expect = 1.545e-29 Identity = 64/71 (90.14%), Postives = 71/71 (100.00%), Query Frame = 2 Query: 158 VNNMVLFDQATYDKLLSEAPKFKLITPSILSDRLRINGSLARRAIKDLMARGSIRMISAHASQQIYTRATN 370 VNNMVLFDQATYDKLLSEAPKFKLITPSILSDRLRINGSLARRAI++LMA+G+IRM+SAH+SQQIYTRAT+ Sbjct: 37 VNNMVLFDQATYDKLLSEAPKFKLITPSILSDRLRINGSLARRAIRELMAKGTIRMVSAHSSQQIYTRATH 107
BLAST of CV886715 vs. ExPASy Swiss-Prot
Match: RS254_ARATH (40S ribosomal protein S25-4 OS=Arabidopsis thaliana GN=RPS25E PE=2 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 2.018e-29 Identity = 63/72 (87.50%), Postives = 71/72 (98.61%), Query Frame = 2 Query: 158 VNNMVLFDQATYDKLLSEAPKFKLITPSILSDRLRINGSLARRAIKDLMARGSIRMISAHASQQIYTRATNT 373 VNNMVLFDQATYDKLL+EAPKFKLITPSILSDR+RINGSLARRAI++LMA+G IRM++AH+SQQIYTRATNT Sbjct: 37 VNNMVLFDQATYDKLLTEAPKFKLITPSILSDRMRINGSLARRAIRELMAKGVIRMVAAHSSQQIYTRATNT 108
BLAST of CV886715 vs. ExPASy Swiss-Prot
Match: RS252_ARATH (40S ribosomal protein S25-2 OS=Arabidopsis thaliana GN=RPS25B PE=2 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 2.635e-29 Identity = 63/72 (87.50%), Postives = 70/72 (97.22%), Query Frame = 2 Query: 158 VNNMVLFDQATYDKLLSEAPKFKLITPSILSDRLRINGSLARRAIKDLMARGSIRMISAHASQQIYTRATNT 373 VNNMVLFDQ TYDKLL+EAPKFKLITPSILSDR+RINGSLARRAI++LMA+G IRM+SAH+SQQIYTRATNT Sbjct: 37 VNNMVLFDQGTYDKLLTEAPKFKLITPSILSDRMRINGSLARRAIRELMAKGLIRMVSAHSSQQIYTRATNT 108
BLAST of CV886715 vs. ExPASy Swiss-Prot
Match: RS251_ARATH (40S ribosomal protein S25-1 OS=Arabidopsis thaliana GN=RPS25A PE=2 SV=2) HSP 1 Score: 122.094 bits (305), Expect = 2.466e-27 Identity = 60/70 (85.71%), Postives = 67/70 (95.71%), Query Frame = 2 Query: 158 VNNMVLFDQATYDKLLSEAPKFKLITPSILSDRLRINGSLARRAIKDLMARGSIRMISAHASQQIYTRAT 367 VNNMVLFDQATYDKL+SEAPKFKLITPSILSDRLRINGSLAR+AI+DLM +G+IRM+S H+SQQI TRAT Sbjct: 36 VNNMVLFDQATYDKLMSEAPKFKLITPSILSDRLRINGSLARKAIRDLMVKGTIRMVSTHSSQQINTRAT 105
BLAST of CV886715 vs. ExPASy Swiss-Prot
Match: RS25_AMACR (40S ribosomal protein S25 OS=Amaranthus cruentus GN=RPS25 PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 3.814e-20 Identity = 47/71 (66.20%), Postives = 62/71 (87.32%), Query Frame = 2 Query: 158 VNNMVLFDQATYDKLLSEAPKFKLITPSILSDRLRINGSLARRAIKDLMARGSIRMISAHASQQIYTRATN 370 VNN+VLFD AT+DKLLSEA K K++T + LS+R RINGSLARRAI++L++RG+I+M+ H+S QIYTR+TN Sbjct: 36 VNNLVLFDNATFDKLLSEAGKQKVVTAATLSERFRINGSLARRAIRELVSRGAIKMVCHHSSLQIYTRSTN 106
BLAST of CV886715 vs. ExPASy Swiss-Prot
Match: RS25_BRABE (40S ribosomal protein S25 OS=Branchiostoma belcheri GN=RPS25 PE=2 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.449e-19 Identity = 47/83 (56.63%), Postives = 66/83 (79.52%), Query Frame = 2 Query: 158 VNNMVLFDQATYDKLLSEAPKFKLITPSILSDRLRINGSLARRAIKDLMARGSIRMISAHASQQIYTRAT-NT*MRITLSSLH 403 +NN+VLFD+ATYDKL E P +KLITPS++S+RL+I GSLAR A+K+L ++G I+++S H++Q IYTRAT +T +I L H Sbjct: 40 LNNLVLFDKATYDKLYKEVPSYKLITPSVVSERLKIRGSLARAALKELHSKGMIKLVSKHSAQVIYTRATKDTDSKIVLRRGH 122
BLAST of CV886715 vs. ExPASy Swiss-Prot
Match: RS25_SHEEP (40S ribosomal protein S25 OS=Ovis aries GN=RPS25 PE=2 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 4.662e-18 Identity = 40/70 (57.14%), Postives = 59/70 (84.29%), Query Frame = 2 Query: 158 VNNMVLFDQATYDKLLSEAPKFKLITPSILSDRLRINGSLARRAIKDLMARGSIRMISAHASQQIYTRAT 367 +NN+VLFD+ATYDKL E P +KLITP+++S+RL+I GSLAR A+++L+++G I+++S H +Q IYTR T Sbjct: 44 LNNLVLFDKATYDKLCKEVPNYKLITPAVVSERLKIRGSLARAALQELLSKGLIKLVSKHRAQVIYTRNT 113
BLAST of CV886715 vs. ExPASy Swiss-Prot
Match: RS25_RAT (40S ribosomal protein S25 OS=Rattus norvegicus GN=Rps25 PE=2 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 4.662e-18 Identity = 40/70 (57.14%), Postives = 59/70 (84.29%), Query Frame = 2 Query: 158 VNNMVLFDQATYDKLLSEAPKFKLITPSILSDRLRINGSLARRAIKDLMARGSIRMISAHASQQIYTRAT 367 +NN+VLFD+ATYDKL E P +KLITP+++S+RL+I GSLAR A+++L+++G I+++S H +Q IYTR T Sbjct: 44 LNNLVLFDKATYDKLCKEVPNYKLITPAVVSERLKIRGSLARAALQELLSKGLIKLVSKHRAQVIYTRNT 113
BLAST of CV886715 vs. ExPASy Swiss-Prot
Match: RS25_MOUSE (40S ribosomal protein S25 OS=Mus musculus GN=Rps25 PE=2 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 4.662e-18 Identity = 40/70 (57.14%), Postives = 59/70 (84.29%), Query Frame = 2 Query: 158 VNNMVLFDQATYDKLLSEAPKFKLITPSILSDRLRINGSLARRAIKDLMARGSIRMISAHASQQIYTRAT 367 +NN+VLFD+ATYDKL E P +KLITP+++S+RL+I GSLAR A+++L+++G I+++S H +Q IYTR T Sbjct: 44 LNNLVLFDKATYDKLCKEVPNYKLITPAVVSERLKIRGSLARAALQELLSKGLIKLVSKHRAQVIYTRNT 113 The following BLAST results are available for this feature:
BLAST of CV886715 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 24
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Sequences
The
following sequences are available for this feature:
EST sequence >CV886715 ID=CV886715; Name=CV886715; organism=Citrus sinensis; type=EST; length=643bpback to top |