CX674457
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX674457 vs. ExPASy Swiss-Prot
Match: RH1_ARATH (DEAD-box ATP-dependent RNA helicase 1 OS=Arabidopsis thaliana GN=RH1 PE=2 SV=2) HSP 1 Score: 397.897 bits (1021), Expect = 3.427e-110 Identity = 201/267 (75.28%), Postives = 232/267 (86.89%), Query Frame = 1 Query: 1 DLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRXSVRSKTL 801 DLALQVKDVF AIAPAVGLSVG AVGQSSIA EIS+LIK PKL+AGICYDP+D+ Q L+SAVDILVATPGRLMDHIN T+GFTLEHL YLVVDETDRLLREAYQ+WLPTVLQLT++ +++ F + F+PSAFGSL+T+RR VERGFK KPYPRLVKMVLSATLTQDP+KL QLDLHHPLF+TTG +RY+LPE+LE +LICE+ +KP+YLVALL+S EKCI+FTSSVE+T RLC LLN FG+ +IK KEYSG S+RSK L Sbjct: 105 DLALQVKDVFDAIAPAVGLSVGSAVGQSSIAGEISQLIKTPKLDAGICYDPDDLSQNLESAVDILVATPGRLMDHINNTKGFTLEHLRYLVVDETDRLLREAYQSWLPTVLQLTQTSDDSLFPSFTPFVPSAFGSLQTVRRQSVERGFKGKPYPRLVKMVLSATLTQDPSKLIQLDLHHPLFMTTGGSRYRLPEKLECLRLICETGMKPVYLVALLKSWEGEKCIIFTSSVETTRRLCKLLNFFGDPKIKAKEYSGGLNQSLRSKEL 371
BLAST of CX674457 vs. ExPASy Swiss-Prot
Match: RH1_ORYSJ (DEAD-box ATP-dependent RNA helicase 1 OS=Oryza sativa subsp. japonica GN=Os02g0795900 PE=2 SV=1) HSP 1 Score: 327.405 bits (838), Expect = 5.688e-89 Identity = 174/268 (64.93%), Postives = 208/268 (77.61%), Query Frame = 1 Query: 1 DLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENR-FSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRXSVRSKTL 801 DLALQVK+VF AIAP VGLSVG AVGQSSIADE+S LI++ K D E + E Q+ VDILVATPGRLMDHI+ T+GF+LEHL YLVVDETDR+LREAYQ+WLPTV+QLTRS ++N +SD + + L TIRR GVERGFK K +PRL K+VLSATLTQDP+KL+QL+L HPL L +G+ RY++P +L+SYKL+C+S LKPL L+ LLQ L EKC+VFTSSVES+HRL TLL F +L K EYS LQR S R KTL Sbjct: 121 DLALQVKEVFDAIAPVVGLSVGSAVGQSSIADEVSNLIEKSKQGLFPSLDEEYIQMEPQTKVDILVATPGRLMDHISMTKGFSLEHLQYLVVDETDRMLREAYQSWLPTVIQLTRSSDQNHSWSDMNG--ETLLHPLTTIRRSGVERGFKGKSFPRLAKIVLSATLTQDPSKLSQLELQHPLLLNSGKKRYRIPTKLQSYKLVCKSNLKPLSLIVLLQELRGEKCLVFTSSVESSHRLSTLLEFFEDLPFKFSEYSRLQRESTRRKTL 386
BLAST of CX674457 vs. ExPASy Swiss-Prot
Match: DDX51_DICDI (Probable ATP-dependent RNA helicase ddx51 OS=Dictyostelium discoideum GN=ddx51 PE=3 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 1.090e-31 Identity = 99/280 (35.36%), Postives = 149/280 (53.21%), Query Frame = 1 Query: 1 DLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNE-NRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYP---------RLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGET---RYKLPERLESYKLICESKLKPLYLVALL-QSL--------GEEKCIVFTSSVESTHRLCTLLNHFGE---LRIKIKEYS 765 DL +QV+ F +I L V L++G E LIK Y+ S VDI+V+TPGR++DHIN T GFTL++L YLV+DE DRLLR+++Q WL V+ T ++ N+ + ++ G ++ + KD +LVK++LSAT+T +P+K++ L L+ PLF TT +T +Y +P L+ +I KPL L+ ++ +SL ++K I FT SV+ THRL TLL G+ L+ +EYS Sbjct: 97 DLVIQVEKTFQSIIKGTDLVV-LSLGVKPFHIEQKLLIKNHSYGEHALYE---------SLVDIIVSTPGRIVDHINETLGFTLKYLNYLVIDEADRLLRQSFQDWLEIVIDSTNQHSDLNQQQEEQLIKYNSKGDIELFEK---SISLKDNNNQMNHLCWSEFKLVKLLLSATMTYNPSKISLLQLNAPLFFTTSKTKEIKYSMPSTLKECYIISNGDQKPLVLLNIIYESLLKNNANGENKKKIICFTKSVDITHRLNTLLKLIGQVDKLKFTCEEYS 363
BLAST of CX674457 vs. ExPASy Swiss-Prot
Match: DDX51_HUMAN (ATP-dependent RNA helicase DDX51 OS=Homo sapiens GN=DDX51 PE=1 SV=3) HSP 1 Score: 126.716 bits (317), Expect = 1.474e-28 Identity = 88/269 (32.71%), Postives = 129/269 (47.96%), Query Frame = 1 Query: 1 DLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTG--------------ETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYS 765 +LA QV VF A L V L GQ S+A E L+++ + DI+VATPGRL+DHI+ T GF+L+ L +L++DE DR++ +Q+WLP V+ F P A L+ + V P L K++ SATLTQ+P KL QL LH P +TG +Y P L + + C KPL ++ L+ +G + + FT+S E++HRL L+ FG + + E+S Sbjct: 292 ELAQQVSKVFNIYTDATPLRVSLVTGQKSLAKEQESLVQK-------------TADGYRCLADIVVATPGRLVDHIDQTPGFSLQQLRFLIIDEADRMIDSMHQSWLPRVVAAA-------FQSEDPADPCAL--LQRRQAQAVTAASTCCPQMPLQKLLFSATLTQNPEKLQQLGLHQPRLFSTGLAHRGLEDTDGDGDSGKYAFPVGLTHHYVPCSLSSKPLVVLHLVLEMGFSRVLCFTNSRENSHRLFLLVQAFG--GVDVAEFS 536
BLAST of CX674457 vs. ExPASy Swiss-Prot
Match: DDX51_DANRE (ATP-dependent RNA helicase DDX51 OS=Danio rerio GN=ddx51 PE=2 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 1.474e-28 Identity = 92/277 (33.21%), Postives = 133/277 (48.01%), Query Frame = 1 Query: 1 DLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHP-LFLTT---------GETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRXSVRSKTL 801 +LA QV +VF+A L V + GQ S A E + L ++ G+ + S DI+VATPGRL+DHIN F+L+HL +L++DE DR++ +Q+WL V + S + S F + G + P L K++ SATLTQ+P KL LDLH P LF +T + + P+ L Y + C KPL ++ L L + FT+S E HRL L+ FG +++ E+S R KTL Sbjct: 283 ELAQQVSNVFSAYTEGSSLKVVMITGQKSFAAEQTAL---SEIRGGVSH----------SMADIVVATPGRLVDHINKNSSFSLQHLRFLIIDEADRMIDSMHQSWLSQVTKAVYSTPGE--THTSVFRRTVPGP--------ITAASLSPPQIPLQKLLFSATLTQNPEKLQLLDLHQPRLFSSTHSLTDNPAQSQDTFHFPQGLSEYYVPCTFSKKPLIILHFLLRLKFSPALCFTNSREGAHRLYLLVKLFG--GVEVAEFSSKLSPGERQKTL 534
BLAST of CX674457 vs. ExPASy Swiss-Prot
Match: DDX51_MOUSE (ATP-dependent RNA helicase DDX51 OS=Mus musculus GN=Ddx51 PE=2 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 1.379e-26 Identity = 86/285 (30.18%), Postives = 130/285 (45.61%), Query Frame = 1 Query: 1 DLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRC---GVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTT---------------GETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRXSVRSKTL 801 +LA QV VF L V L GQ S+A E L+++ + DI+VATPGRL+DHI+ T GF+L+ L +L++DE DR++ +Q+WLP V+ A+ + GS ++R + P L K++ SATLTQDP KL +L L+ P +T +Y P L + + C KPL ++ L+ + + + FT+S E++HRL L FG + + E+S R K L Sbjct: 264 ELAQQVSKVFNIYTDTTPLRVALVTGQKSLAKEQESLVQK-------------TADGFRCLADIVVATPGRLVDHIDQTPGFSLQQLRFLIIDEADRMIDSMHQSWLPRVVA------------AAFYSEGPTGSCALLQRTQPQALTAASTCVPQMPLQKLLFSATLTQDPEKLQRLGLYQPRLFSTRLGQQSPKDTAEVDENSGKYTFPVGLTHHYVPCRLSSKPLIVLHLVLRMSCSRALCFTNSRENSHRLYLLAQAFG--GVSVAEFSSRYGPGQRKKIL 521
BLAST of CX674457 vs. ExPASy Swiss-Prot
Match: DBP6_ASPNC (ATP-dependent RNA helicase dbp6 OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=dbp6 PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 2.435e-23 Identity = 91/261 (34.87%), Postives = 127/261 (48.66%), Query Frame = 1 Query: 1 DLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFG-SLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTG----------------ETRYKLPERLESYKL-ICESKLKPLYLVALLQS--LGEEKCIVFTSSVESTHRLCTLL 723 +L Q ++ A GL V AVG +I DE E + + + VDIL+ TPGRL+DH+ T+GFTL++L +LV+DE DRLL E++Q W+ V +T D P AFG S + G+ K+ PR K+VLSAT+T+D KL L L +P + G + ++ LP LE + + + + KPLYL+ LL S E K +VFT S ES RL LL Sbjct: 206 ELVKQAREACELCAAGSGLRVASAVGNVAIKDEQRESLP-------------GYVHRSEPNVDILICTPGRLVDHLRYTKGFTLKNLEWLVIDEADRLLNESFQEWVDVV--MTSLDARK--------APDAFGFSGNFLSGLGLPIQSKE---PR--KVVLSATMTRDVTKLNSLRLANPKLVVIGSDAAATEDESGGVAPSDEQFTLPPTLEEHTVSVGDGSQKPLYLLRLLLSHIKLETKILVFTKSSESASRLARLL 438
BLAST of CX674457 vs. ExPASy Swiss-Prot
Match: DDX51_DROME (Probable ATP-dependent RNA helicase Dbp73D OS=Drosophila melanogaster GN=Dbp73D PE=2 SV=3) HSP 1 Score: 105.916 bits (263), Expect = 2.692e-22 Identity = 86/293 (29.35%), Postives = 131/293 (44.71%), Query Frame = 1 Query: 1 DLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGET-------------------------RYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLN-HFGELRIKIKEYSGLQRXSVRSKTL 801 +LALQV V + + L V L Q + DE +L+++ K + S DI+V TPGRL+DH++AT+GF L+ L +LV+DE DR++ +Q WL + + + A T P + L + F +P+ K++ SATL+QDP KL L L P T T RY P L + E +LKPL + AL++ ++ + FT+S + RL +L F + K+ E SG VR++ L Sbjct: 226 ELALQVYRVISELCSKTELEVCLLSKQHKLEDEQEKLVEQYK-------------GKYYSKADIVVTTPGRLVDHLHATKGFCLKSLKFLVIDEADRIMDAVFQNWLYHLDSHVKETTDQLL--AGTQAPLCYAEL--------QASFGKQPH----KLLFSATLSQDPEKLQDLRLFQPRLFATVLTMPVLKDATEEGADTEALTDPGQFVGRYTTPAELTEQYCVTELRLKPLTVFALVEKYKWKRFLCFTNSSDQATRLTFVLKVLFQKYSTKVSELSGNLSAKVRNERL 491
BLAST of CX674457 vs. ExPASy Swiss-Prot
Match: DBP6_CANGA (ATP-dependent RNA helicase DBP6 OS=Candida glabrata GN=DBP6 PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 5.076e-21 Identity = 74/218 (33.94%), Postives = 111/218 (50.92%), Query Frame = 1 Query: 82 SSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHP-LFLTTGETRYKLPERLESYKL---ICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLL 723 S +A+ S +I KLE E+ + L++ DI + TPGRL+DH+ + +L +L +LV+DE DRLL +++Q W+P V+ +SD ++ + ++KMV SATLT + KL L L++P LF T Y LP L+ Y+L +S KPLYL+ LL+ L K +VF S ES+ +L LL Sbjct: 299 SQLAEGTSLVITVSKLENSF---NEEHKRLLKTEPDIFITTPGRLVDHLTNS-SISLRNLKFLVLDEADRLLNQSFQNWIPEVMSKFKSDKFDQMPGS------------------------------IIKMVFSATLTTNTEKLNDLQLYNPTLFATDSVKLYNLPPTLQEYQLQIPSAKSVYKPLYLLKLLEQLSGGKTLVFVRSNESSLKLEVLL 482
BLAST of CX674457 vs. ExPASy Swiss-Prot
Match: DBP6_SCHPO (ATP-dependent RNA helicase dbp6 OS=Schizosaccharomyces pombe GN=dbp6 PE=2 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 6.630e-21 Identity = 84/265 (31.70%), Postives = 121/265 (45.66%), Query Frame = 1 Query: 1 DLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRS----DNENRFSD-----ASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTT----------GETR-----YKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLL 723 +L +QV F GL V GQ S+ E +L E + +D+LV+TPGRL+DHI F+L+HL Y+V+DE DRLL +++Q W+ TV+ N++ D + TFLP +L R P P L K+V SATLT+DP+K+A L LH+P + GE + +P L+ Y + S+ KP+ L L+ S + F S E+ RL LL Sbjct: 216 ELTVQVAKTFEYYMSGAGLQVCAWTGQKSLRHETYQLNG----------------DENECRIDVLVSTPGRLVDHIRNDESFSLQHLRYMVIDEADRLLDQSFQDWVDTVMMEISHPKCLQNKSNILDLDQNISPTFLPD-IDTLLPYR----------LPSP-LQKLVFSATLTRDPSKIASLKLHNPRLVLVQNKDMEVDDGGEIEDDAIVFSVPPTLQEYHVSVSSE-KPILLYHLIHSKNLTNILCFVKSNEAAARLHRLL 451 The following BLAST results are available for this feature:
BLAST of CX674457 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 39
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Sequences
The
following sequences are available for this feature:
EST sequence >CX674457 ID=CX674457; Name=CX674457; organism=Citrus sinensis; type=EST; length=803bpback to top |