EY665513

Overview
NameEY665513
Unique NameEY665513
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length859
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665513 vs. ExPASy Swiss-Prot
Match: UPL1_ARATH (E3 ubiquitin-protein ligase UPL1 OS=Arabidopsis thaliana GN=UPL1 PE=1 SV=3)

HSP 1 Score: 432.18 bits (1110), Expect = 1.826e-120
Identity = 210/245 (85.71%), Postives = 228/245 (93.06%), Query Frame = 1
Query:    1 HQHDHHHS-PLRISVRRAYILEDSYNQLRMRSTQDLKGRLTVHFQGEEGIDAGGLTREWYQLLSRVIFDKGALLFTTVGNESTFQPNPNSVYQTEHLSYFKFVGRVVGKALFDGQLLDVHFTRSFYKHILGVKVTYHDIEAIDPDYFKNLKWMLENDISDVLDLTFSIDADEEKLILYERAQVTDYELIPGGRNIKVTEENKHQYVDLVAEHRLTTAIRPPINAFLEGFTELIPGELISIFHDQE 732
            HQHD H S PLRISVRRAY+LEDSYNQLRMRS QDLKGRL V FQGEEGIDAGGLTREWYQLLSRVIFDKGALLFTTVGN++TFQPNPNSVYQTEHLSYFKFVGR+V KALFDGQLLDV+FTRSFYKHILGVKVTYHDIEA+DPDY+KNLKW+LEND+SD+LDLTFS+DADEEK ILYE+ +VTDYEL PGGRNI+VTEE KH+YVDLVA H LT AIRP INAFLEGF ELIP EL+SIF+D+E
Sbjct: 3309 HQHDQHISGPLRISVRRAYVLEDSYNQLRMRSPQDLKGRLNVQFQGEEGIDAGGLTREWYQLLSRVIFDKGALLFTTVGNDATFQPNPNSVYQTEHLSYFKFVGRMVAKALFDGQLLDVYFTRSFYKHILGVKVTYHDIEAVDPDYYKNLKWLLENDVSDILDLTFSMDADEEKHILYEKTEVTDYELKPGGRNIRVTEETKHEYVDLVAGHILTNAIRPQINAFLEGFNELIPRELVSIFNDKE 3553          
BLAST of EY665513 vs. ExPASy Swiss-Prot
Match: UPL2_ARATH (E3 ubiquitin-protein ligase UPL2 OS=Arabidopsis thaliana GN=UPL2 PE=1 SV=2)

HSP 1 Score: 431.795 bits (1109), Expect = 2.385e-120
Identity = 209/245 (85.31%), Postives = 229/245 (93.47%), Query Frame = 1
Query:    1 HQHDHHHS-PLRISVRRAYILEDSYNQLRMRSTQDLKGRLTVHFQGEEGIDAGGLTREWYQLLSRVIFDKGALLFTTVGNESTFQPNPNSVYQTEHLSYFKFVGRVVGKALFDGQLLDVHFTRSFYKHILGVKVTYHDIEAIDPDYFKNLKWMLENDISDVLDLTFSIDADEEKLILYERAQVTDYELIPGGRNIKVTEENKHQYVDLVAEHRLTTAIRPPINAFLEGFTELIPGELISIFHDQE 732
            HQHD H S PLRISVRRAY+LEDSYNQLRMRS QDLKGRL V FQGEEGIDAGGLTREWYQLLSRVIFDKGALLFTTVGN++TFQPNPNSVYQTEHLSYFKFVGR+V KALFDGQLLDV+FTRSFYKHILGVKVTYHDIEA+DPDY+KNLKW+LEND+SD+LDLTFS+DADEEK ILYE+ +VTDYEL PGGRNI+VTEE KH+YVDLVA+H LT+AIRP INAFLEG  ELIP EL+SIF+D+E
Sbjct: 3286 HQHDQHISGPLRISVRRAYVLEDSYNQLRMRSPQDLKGRLNVQFQGEEGIDAGGLTREWYQLLSRVIFDKGALLFTTVGNDATFQPNPNSVYQTEHLSYFKFVGRMVAKALFDGQLLDVYFTRSFYKHILGVKVTYHDIEAVDPDYYKNLKWLLENDVSDILDLTFSMDADEEKHILYEKTEVTDYELKPGGRNIRVTEETKHEYVDLVADHILTSAIRPQINAFLEGLNELIPRELVSIFNDKE 3530          
BLAST of EY665513 vs. ExPASy Swiss-Prot
Match: TOM1_NEUCR (E3 ubiquitin-protein ligase TOM1-like OS=Neurospora crassa GN=B11B22.010 PE=3 SV=3)

HSP 1 Score: 250.751 bits (639), Expect = 7.535e-66
Identity = 122/245 (49.80%), Postives = 175/245 (71.43%), Query Frame = 1
Query:    4 QHDHHHSPLRISVRRAYILEDSYNQLRMRSTQDLK-GRLTVHFQGEEGIDAGGLTREWYQLLSRVIFDKGALLFTTVGNE-STFQPNPNSVYQTEHLSYFKFVGRVVGKALFDGQLLDVHFTRSFYKHILGVKVTYHDIEAIDPDYFKNLKWMLENDISDVLDLTFSIDADEEKLILYERAQVTDYELIPGGRNIKVTEENKHQYVDLVAEHRLTTAIRPPINAFLEGFTELIPGELISIFHDQE 732
            Q  H   PL++ VRR ++  DS+  L  +   +LK G+L + FQGEEG+DAGG+TREW+Q+LSR +FD   +LF  V ++ +TF PN  S    EHL +FKF+GR++GKAL++G+LL+ +F+R+ YK ILG  V+  D+E+ DPDY+K+L WMLENDI+D++  TFS++ D     ++   +V D  LI  GRNI VTEENKH+YV L+ EH+L T+++  + AFL GF E+IP ELI+IF++QE
Sbjct: 3661 QTRHSFPPLQLQVRREHVFHDSFRSLYYKKADELKFGKLNIRFQGEEGVDAGGVTREWFQVLSRQMFDPNYVLFVPVSSDRTTFHPNKLSPINDEHLPFFKFIGRIIGKALYEGRLLECYFSRAVYKRILGKPVSVKDMESFDPDYYKSLVWMLENDITDIITETFSVEDD-----VFGEVKVVD--LIENGRNIPVTEENKHEYVRLIVEHKLITSVKDQMKAFLTGFHEIIPEELIAIFNEQE 3898          
BLAST of EY665513 vs. ExPASy Swiss-Prot
Match: PTR1_SCHPO (E3 ubiquitin-protein ligase ptr1 OS=Schizosaccharomyces pombe GN=ptr1 PE=1 SV=1)

HSP 1 Score: 226.868 bits (577), Expect = 1.165e-58
Identity = 109/240 (45.42%), Postives = 167/240 (69.58%), Query Frame = 1
Query:   19 HSPLRISVRRAYILEDSYNQLRMRSTQDLK-GRLTVHFQGEEGIDAGGLTREWYQLLSRVIFDKGALLFTTV-GNESTFQPNPNSVYQTEHLSYFKFVGRVVGKALFDGQLLDVHFTRSFYKHILGVKVTYHDIEAIDPDYFKNLKWMLENDISDVLDLTFSIDADEEKLILYERAQVTDYELIPGGRNIKVTEENKHQYVDLVAEHRLTTAIRPPINAFLEGFTELIPGELISIFHDQE 732
            + PL I+VRR ++  DSY  L  +   ++K  +L +HF+ EEG+DAGG+TREW Q+L+R +F+    LF  V G+ +TF PN +S    +HLS+FKF GR++GKAL+DG+LLD HF+R+ YKH+L   V+  DIE++DPDY+K+L WML NDI+D++   F+++ D    +  E+  V   +LIP GRNI VTE NK  YV+ + +++L  +++  + + L+GF+++IP  LI IF++QE
Sbjct: 2867 YPPLNITVRRDHVFLDSYRALHFKDADEVKFSKLNIHFRDEEGVDAGGVTREWLQVLARQMFNPDYALFLPVTGDATTFHPNRDSSVNPDHLSFFKFTGRIIGKALYDGRLLDCHFSRAVYKHMLHRSVSVKDIESLDPDYYKSLVWMLNNDITDIITEEFAVEKD----VFGEKTVV---DLIPNGRNIPVTELNKQNYVNRMVDYKLRESVKDQLKSLLDGFSDIIPSHLIQIFNEQE 3099          
BLAST of EY665513 vs. ExPASy Swiss-Prot
Match: TOM1_ASHGO (Probable E3 ubiquitin-protein ligase TOM1 OS=Ashbya gossypii GN=TOM1 PE=3 SV=1)

HSP 1 Score: 223.016 bits (567), Expect = 1.683e-57
Identity = 112/242 (46.28%), Postives = 164/242 (67.77%), Query Frame = 1
Query:   13 HHHSPLRISVRRAYILEDSYNQLRMRSTQDLK-GRLTVHFQGEEGIDAGGLTREWYQLLSRVIFDKGALLFTTVGNE-STFQPNPNSVYQTEHLSYFKFVGRVVGKALFDGQLLDVHFTRSFYKHILGVKVTYHDIEAIDPDYFKNLKWMLENDISDVLDLTFSIDADEEKLILYERAQVTDYELIPGGRNIKVTEENKHQYVDLVAEHRLTTAIRPPINAFLEGFTELIPGELISIFHDQE 732
            H    L ISVRR ++  DSY  L  +S +D+K  +L + F+GE G+DAGG+TREWYQ+LSR +F+    LF  V ++ +TF+PN  S    EHLS+FKF+G ++GKA+ D   LD HF+R  YK+ILG  V   D+E++D DY+K+L W+LENDI+D+++ TFS++ D+     Y   +V   ELI  G ++ VTE+NKH YV  + E++L T+++  +  FL+GF  +IP +LISIF +QE
Sbjct: 2896 HDRPKLSISVRREHVFLDSYRSLFFKSNEDIKISKLEISFKGEAGVDAGGITREWYQVLSRQMFNPDYALFIPVASDKTTFRPNRTSGINPEHLSFFKFIGMIIGKAISDQCFLDCHFSREVYKNILGKPVALKDMESLDLDYYKSLIWILENDITDIIEETFSVETDD-----YGEHKV--IELIENGAHVAVTEQNKHDYVKKIVEYKLQTSVKDQMENFLQGFYAIIPKDLISIFDEQE 3130          
BLAST of EY665513 vs. ExPASy Swiss-Prot
Match: HUWE1_MOUSE (E3 ubiquitin-protein ligase HUWE1 OS=Mus musculus GN=Huwe1 PE=1 SV=4)

HSP 1 Score: 221.476 bits (563), Expect = 4.896e-57
Identity = 119/237 (50.21%), Postives = 162/237 (68.35%), Query Frame = 1
Query:   28 LRISVRRAYILEDSYNQLRMRSTQDLKGRLTVHFQGEEGIDAGGLTREWYQLLSRVIFDKGALLF-TTVGNESTFQPNPNSVYQTEHLSYFKFVGRVVGKALFDGQLLDVHFTRSFYKHILGVKVTYHDIEAIDPDYFKNLKWMLENDISDV-LDLTFSIDADEEKLILYERAQVTDYELIPGGRNIKVTEENKHQYVDLVAEHRLTTAIRPPINAFLEGFTELIPGELISIFHDQE 732
            + + VRR ++ EDSY +L  +S +++K RL + F+GEEG DAGGL REWY ++SR +F+    LF T+ G+  T+  NP+S     HLSYFKFVGR+V KA++D +LL+ +FTRSFYKHILG  V Y D+E+ D  +++ L ++LEND+S +  DLTFS +  E     +   +V D  L P G NI VTEENK +YV LV + R+T AIR  + AFLEGF E+IP  LISIF +QE
Sbjct: 4020 MAVHVRRDHVFEDSYRELHRKSPEEMKNRLYIVFEGEEGQDAGGLLREWYMIISREMFNPMYALFRTSPGDRVTYTINPSSHCNPNHLSYFKFVGRIVAKAVYDNRLLECYFTRSFYKHILGKSVRYTDMESEDYHFYQGLVYLLENDVSTLGYDLTFSTEVQE-----FGVCEVRD--LKPNGANILVTEENKKEYVHLVCQMRMTGAIRKQLAAFLEGFYEIIPKRLISIFTEQE 4249          
BLAST of EY665513 vs. ExPASy Swiss-Prot
Match: HUWE1_HUMAN (E3 ubiquitin-protein ligase HUWE1 OS=Homo sapiens GN=HUWE1 PE=1 SV=3)

HSP 1 Score: 221.476 bits (563), Expect = 4.896e-57
Identity = 119/237 (50.21%), Postives = 162/237 (68.35%), Query Frame = 1
Query:   28 LRISVRRAYILEDSYNQLRMRSTQDLKGRLTVHFQGEEGIDAGGLTREWYQLLSRVIFDKGALLF-TTVGNESTFQPNPNSVYQTEHLSYFKFVGRVVGKALFDGQLLDVHFTRSFYKHILGVKVTYHDIEAIDPDYFKNLKWMLENDISDV-LDLTFSIDADEEKLILYERAQVTDYELIPGGRNIKVTEENKHQYVDLVAEHRLTTAIRPPINAFLEGFTELIPGELISIFHDQE 732
            + + VRR ++ EDSY +L  +S +++K RL + F+GEEG DAGGL REWY ++SR +F+    LF T+ G+  T+  NP+S     HLSYFKFVGR+V KA++D +LL+ +FTRSFYKHILG  V Y D+E+ D  +++ L ++LEND+S +  DLTFS +  E     +   +V D  L P G NI VTEENK +YV LV + R+T AIR  + AFLEGF E+IP  LISIF +QE
Sbjct: 4017 MAVHVRRDHVFEDSYRELHRKSPEEMKNRLYIVFEGEEGQDAGGLLREWYMIISREMFNPMYALFRTSPGDRVTYTINPSSHCNPNHLSYFKFVGRIVAKAVYDNRLLECYFTRSFYKHILGKSVRYTDMESEDYHFYQGLVYLLENDVSTLGYDLTFSTEVQE-----FGVCEVRD--LKPNGANILVTEENKKEYVHLVCQMRMTGAIRKQLAAFLEGFYEIIPKRLISIFTEQE 4246          
BLAST of EY665513 vs. ExPASy Swiss-Prot
Match: PUB1_SCHPO (E3 ubiquitin-protein ligase pub1 OS=Schizosaccharomyces pombe GN=pub1 PE=1 SV=2)

HSP 1 Score: 211.075 bits (536), Expect = 6.617e-54
Identity = 115/235 (48.94%), Postives = 158/235 (67.23%), Query Frame = 1
Query:   34 ISVRRAYILEDSYNQLRMRSTQDLKGRLTVHFQGEEGIDAGGLTREWYQLLSRVIFDKGALLF--TTVGNESTFQPNPNSVYQTEHLSYFKFVGRVVGKALFDGQLLDVHFTRSFYKHILGVKVTYHDIEAIDPDYFKNLKWMLENDISDVLDLTFSIDADEEKLILYERAQVTDYELIPGGRNIKVTEENKHQYVDLVAEHRLTTAIRPPINAFLEGFTELIPGELISIFHDQE 732
            I VRR +I EDSY ++  +S  DLK RL + F GE+G+D GGL+RE++ LLS  +F+    LF  ++V N  T Q NP+S    EHL+YFKF+GRV+G A+F  + +D  F  SFYK IL  KVT  D+E++D +Y+++L W+L+NDI+ VLDLTFS+   E+        +V   +L P GRNI+VTEENK +YVDLV   R+   I    NAF EGF+ELIP ELI++F ++E
Sbjct:  415 IKVRRNHIFEDSYAEIMRQSATDLKKRLMIKFDGEDGLDYGGLSREYFFLLSHEMFNPFYCLFEYSSVDNY-TLQINPHSGINPEHLNYFKFIGRVIGLAIFHRRFVDAFFVVSFYKMILQKKVTLQDMESMDAEYYRSLVWILDNDITGVLDLTFSV---EDNCF----GEVVTIDLKPNGRNIEVTEENKREYVDLVTVWRIQKRIEEQFNAFHEGFSELIPQELINVFDERE 641          
BLAST of EY665513 vs. ExPASy Swiss-Prot
Match: TOM1_YEAST (E3 ubiquitin-protein ligase TOM1 OS=Saccharomyces cerevisiae GN=TOM1 PE=1 SV=1)

HSP 1 Score: 210.69 bits (535), Expect = 8.641e-54
Identity = 111/244 (45.49%), Postives = 164/244 (67.21%), Query Frame = 1
Query:   10 DHHHSP-LRISVRRAYILEDSYNQLRMRSTQDLKG-RLTVHFQGEEGIDAGGLTREWYQLLSRVIFDKGALLFTTV-GNESTFQPNPNSVYQTEHLSYFKFVGRVVGKALFDGQLLDVHFTRSFYKHILGVKVTYHDIEAIDPDYFKNLKWMLENDISDVLDLTFSIDADEEKLILYERAQVTDYELIPGGRNIKVTEENKHQYVDLVAEHRLTTAIRPPINAFLEGFTELIPGELISIFHDQE 732
            D+   P L I+VRR  +  DSY  L  ++  ++K  +L + F+GE G+DAGG+TREWYQ+LSR +F+    LF  V  +++TF PN  S    EHLS+FKF+G ++GKA+ D   LD HF+R  YK+ILG  V+  D+E++DPDY+K+L W+LENDI+D+++ TFS++ D+     Y   +V +  LI GG++I VTE NK  YV  V E++L T+++  ++ FL GF  LI  +LI+IF +QE
Sbjct: 2904 DNQERPKLPITVRREQVFLDSYRALFFKTNDEIKNSKLEITFKGESGVDAGGVTREWYQVLSRQMFNPDYALFLPVPSDKTTFHPNRTSGINPEHLSFFKFIGMIIGKAIRDQCFLDCHFSREVYKNILGRPVSLKDMESLDPDYYKSLVWILENDITDIIEETFSVETDD-----YGEHKVIN--LIEGGKDIIVTEANKQDYVKKVVEYKLQTSVKEQMDNFLVGFYALISKDLITIFDEQE 3140          
BLAST of EY665513 vs. ExPASy Swiss-Prot
Match: PUB3_SCHPO (E3 ubiquitin-protein ligase pub3 OS=Schizosaccharomyces pombe GN=pub3 PE=2 SV=1)

HSP 1 Score: 207.223 bits (526), Expect = 9.554e-53
Identity = 106/234 (45.30%), Postives = 153/234 (65.38%), Query Frame = 1
Query:   34 ISVRRAYILEDSYNQLRMRSTQDLKGRLTVHFQGEEGIDAGGLTREWYQLLSRVIFDKGALLFT-TVGNESTFQPNPNSVYQTEHLSYFKFVGRVVGKALFDGQLLDVHFTRSFYKHILGVKVTYHDIEAIDPDYFKNLKWMLENDISDVLDLTFSIDADEEKLILYERAQVTDYELIPGGRNIKVTEENKHQYVDLVAEHRLTTAIRPPINAFLEGFTELIPGELISIFHDQE 732
            + VRR +I EDSY ++   S  DLK RL + F GE+G+D GGL+RE++ LLS  +FD    LF  +  +  T Q NP+S    EHL+YF+F+GRV+G A+F  + LD  F  S YK +L  KV+  D+E+ID +++++LKW+LENDI+ +LDLTFS++ D          +V   ELI  G NI+VTEENK +YVDLV E R++  +    NAF  GF EL+  +L+++F ++E
Sbjct:  434 VKVRRDHIFEDSYAEIMRYSAHDLKKRLMIRFDGEDGLDYGGLSREFFFLLSHKMFDPIYCLFEYSAVDNYTLQINPHSSINPEHLNYFRFIGRVIGLAIFHRRFLDAFFVVSLYKKLLRKKVSLADMESIDAEFYRSLKWVLENDITGILDLTFSVEED-------HFGEVRTVELITNGENIEVTEENKKKYVDLVTEWRVSKRVEQQFNAFYSGFVELVSPDLVNVFDERE 660          
The following BLAST results are available for this feature:
BLAST of EY665513 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 75
Match NameE-valueIdentityDescription
UPL1_ARATH1.826e-12085.71E3 ubiquitin-protein ligase UPL1 OS=Arabidopsis th... [more]
UPL2_ARATH2.385e-12085.31E3 ubiquitin-protein ligase UPL2 OS=Arabidopsis th... [more]
TOM1_NEUCR7.535e-6649.80E3 ubiquitin-protein ligase TOM1-like OS=Neurospor... [more]
PTR1_SCHPO1.165e-5845.42E3 ubiquitin-protein ligase ptr1 OS=Schizosaccharo... [more]
TOM1_ASHGO1.683e-5746.28Probable E3 ubiquitin-protein ligase TOM1 OS=Ashby... [more]
HUWE1_MOUSE4.896e-5750.21E3 ubiquitin-protein ligase HUWE1 OS=Mus musculus ... [more]
HUWE1_HUMAN4.896e-5750.21E3 ubiquitin-protein ligase HUWE1 OS=Homo sapiens ... [more]
PUB1_SCHPO6.617e-5448.94E3 ubiquitin-protein ligase pub1 OS=Schizosaccharo... [more]
TOM1_YEAST8.641e-5445.49E3 ubiquitin-protein ligase TOM1 OS=Saccharomyces ... [more]
PUB3_SCHPO9.554e-5345.30E3 ubiquitin-protein ligase pub3 OS=Schizosaccharo... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-102-001-B07-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665513 ID=EY665513; Name=EY665513; organism=Citrus sinensis; type=EST; length=859bp
CATCAACATGATCACCACCACAGTCCTTTGAGAATATCTGTAAGAAGAGC
TTACATTCTTGAAGATTCATACAACCAACTGCGCATGCGATCAACGCAAG
ATTTGAAGGGAAGGTTGACTGTTCACTTTCAAGGAGAGGAAGGCATTGAT
GCCGGTGGCCTTACAAGGGAGTGGTACCAATTGCTGTCAAGGGTTATTTT
TGACAAGGGAGCCCTACTTTTCACAACAGTGGGCAATGAATCAACATTCC
AACCCAACCCCAACTCTGTTTACCAAACTGAACATCTTTCATATTTCAAG
TTTGTTGGGCGAGTTGTTGGAAAAGCTCTTTTTGATGGGCAACTGTTGGA
TGTCCATTTTACTCGATCTTTCTACAAGCACATCCTGGGGGTTAAAGTTA
CTTATCATGACATTGAAGCTATTGATCCGGATTACTTCAAAAACCTGAAG
TGGATGCTTGAGAATGACATCAGTGATGTTCTTGACCTCACTTTTAGTAT
TGATGCTGATGAGGAGAAGCTGATTTTGTATGAAAGGGCGCAGGTAACCG
ACTATGAGCTAATTCCTGGTGGACGGAATATTAAAGTTACTGAGGAGAAT
AAGCACCAGTATGTGGATTTAGTCGCGGAGCATCGTTTGACGACTGCTAT
TCGGCCTCCAATAAATGCTTTTCTGGAGGGATTTACCGAACTAATTCCTG
GGGAGTTGATATCTATCTTCCATGACCAGGAATTATAATTATTGATTAGT
GGGCTTTCCGGATATTGAATCTGGATGAAATGAGGGCAAATACCGGAATA
TTCTGGATATAGTGCTGGCTCTCCTGGTTATCCAAGTGTTTTGGGAGGTT
GGTCACGGG
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