EY717722
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY717722 vs. ExPASy Swiss-Prot
Match: RCA1_LARTR (Ribulose bisphosphate carboxylase/oxygenase activase 1, chloroplastic OS=Larrea tridentata GN=RCA1 PE=2 SV=1) HSP 1 Score: 228.794 bits (582), Expect = 8.826e-62 Identity = 115/155 (74.19%), Postives = 132/155 (85.16%), Query Frame = 2 Query: 122 PLSFNGSGAATS-VPSSSFFGTSLKKVSSRIPPSKVPSASFKITA-EVDENKQTKQDRWKGLAYDESDDQQDITRGKGAVDSLFQAPMGTGTHYAVMSSYDYISQGLRTYNLDNTIDGLYIAPAFMDKLVVHITKNFMSLPNIKVPLILGIWEAK 580 PLS NGSGA S VPS++FFG+SLKK +++ P K S +FKI A E+ E++QT +D+WKGLAYD SDDQQDITRGKG VD+LFQAPM +GTHYAVMSSYDYISQGLR YNLDN +DG YIAPAFMDKLVVHITKNF+SLPNIK+PLILGIW K Sbjct: 15 PLSLNGSGARASLVPSTAFFGSSLKKSAAKFP--KASSGNFKIVAQEISEDQQTDKDKWKGLAYDISDDQQDITRGKGMVDTLFQAPMQSGTHYAVMSSYDYISQGLRQYNLDNNMDGFYIAPAFMDKLVVHITKNFLSLPNIKIPLILGIWGGK 167 HSP 2 Score: 30.4166 bits (67), Expect = 8.826e-62 Identity = 22/61 (36.07%), Postives = 30/61 (49.18%), Query Frame = 1 Query: 559 LGNLGSKGQGNHSNVTW-FPQDGLNPIMMNAENWKVDMLENP-YIHQARYREAIEFTGRKK 735 LG G KGQG F + G+NPIMM+A + P + + RYREA + + K Sbjct: 161 LGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIKKGK 221
BLAST of EY717722 vs. ExPASy Swiss-Prot
Match: RCA2_LARTR (Ribulose bisphosphate carboxylase/oxygenase activase 2, chloroplastic OS=Larrea tridentata GN=RCA2 PE=2 SV=1) HSP 1 Score: 228.794 bits (582), Expect = 8.832e-62 Identity = 115/155 (74.19%), Postives = 132/155 (85.16%), Query Frame = 2 Query: 122 PLSFNGSGAATS-VPSSSFFGTSLKKVSSRIPPSKVPSASFKITA-EVDENKQTKQDRWKGLAYDESDDQQDITRGKGAVDSLFQAPMGTGTHYAVMSSYDYISQGLRTYNLDNTIDGLYIAPAFMDKLVVHITKNFMSLPNIKVPLILGIWEAK 580 PLS NGSGA S VPS++FFG+SLKK +++ P K S +FKI A E+ E++QT +D+WKGLAYD SDDQQDITRGKG VD+LFQAPM +GTHYAVMSSYDYISQGLR YNLDN +DG YIAPAFMDKLVVHITKNF+SLPNIK+PLILGIW K Sbjct: 15 PLSLNGSGARASLVPSTAFFGSSLKKSAAKFP--KASSGNFKIVAQEISEDQQTDKDKWKGLAYDISDDQQDITRGKGMVDTLFQAPMQSGTHYAVMSSYDYISQGLRQYNLDNNMDGFYIAPAFMDKLVVHITKNFLSLPNIKIPLILGIWGGK 167 HSP 2 Score: 30.4166 bits (67), Expect = 8.832e-62 Identity = 22/61 (36.07%), Postives = 30/61 (49.18%), Query Frame = 1 Query: 559 LGNLGSKGQGNHSNVTW-FPQDGLNPIMMNAENWKVDMLENP-YIHQARYREAIEFTGRKK 735 LG G KGQG F + G+NPIMM+A + P + + RYREA + + K Sbjct: 161 LGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIKKGK 221
BLAST of EY717722 vs. ExPASy Swiss-Prot
Match: RCA_MALDO (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Malus domestica GN=RCA PE=2 SV=1) HSP 1 Score: 233.417 bits (594), Expect = 1.311e-60 Identity = 112/153 (73.20%), Postives = 129/153 (84.31%), Query Frame = 2 Query: 122 PLSFNGSGAATSVPSSSFFGTSLKKVSSRIPPSKVPSASFKITAEVDENKQTKQDRWKGLAYDESDDQQDITRGKGAVDSLFQAPMGTGTHYAVMSSYDYISQGLRTYNLDNTIDGLYIAPAFMDKLVVHITKNFMSLPNIKVPLILGIWEAK 580 P + NGS ++ SVPSS+F G+SLKKV+SR SKV S S +I A VDE+KQT +DRWKGLA+D SDDQQDITRGKG VDSLFQAP G+GTH+A+MSSY+YIS GLR YN DN +DG YIAPAFMDKLVVHITKNFM+LPN+KVPLILGIW K Sbjct: 15 PPNLNGSSSSASVPSSTFLGSSLKKVNSRFTNSKVSSGSLRIVASVDEDKQTDKDRWKGLAFDTSDDQQDITRGKGKVDSLFQAPQGSGTHFAIMSSYEYISTGLRQYNFDNNMDGYYIAPAFMDKLVVHITKNFMTLPNMKVPLILGIWGGK 167
BLAST of EY717722 vs. ExPASy Swiss-Prot
Match: RCA_PHAAU (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Phaseolus aureus GN=RCA PE=2 SV=2) HSP 1 Score: 222.246 bits (565), Expect = 4.726e-60 Identity = 114/156 (73.08%), Postives = 129/156 (82.69%), Query Frame = 2 Query: 125 LSFNGSGAATSVPSSSFFGTSLKK-VSSRIPPSKVPSASFKITA---EVDENKQTKQDRWKGLAYDESDDQQDITRGKGAVDSLFQAPMGTGTHYAVMSSYDYISQGLRTYNLDNTIDGLYIAPAFMDKLVVHITKNFMSLPNIKVPLILGIWEAK 580 L+ NGSGA S P+S+FFGTSLKK V+SR+P SKV + SFKI A E++E++QT +DRWKGLAYD SDDQQDITRGKG VD LFQAPM GTHYAVMSSY+Y+S GLR LDN DG YIAPAF+DKLVVHITKNFM+LPNIKVPLILGIW K Sbjct: 16 LNLNGSGAGASAPTSAFFGTSLKKAVASRVPNSKVTNGSFKIVAAEKEIEESQQTNKDRWKGLAYDISDDQQDITRGKGMVDPLFQAPMDAGTHYAVMSSYEYLSTGLR--QLDNIKDGFYIAPAFLDKLVVHITKNFMTLPNIKVPLILGIWGGK 169 HSP 2 Score: 31.187 bits (69), Expect = 4.726e-60 Identity = 22/61 (36.07%), Postives = 30/61 (49.18%), Query Frame = 1 Query: 559 LGNLGSKGQGNHSNVTW-FPQDGLNPIMMNAENWKVDMLENP-YIHQARYREAIEFTGRKK 735 LG G KGQG F + G+NPIMM+A + P + + RYREA + + K Sbjct: 163 LGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADLIAKGK 223
BLAST of EY717722 vs. ExPASy Swiss-Prot
Match: RCA_PHAVU (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Phaseolus vulgaris GN=RCA1 PE=2 SV=1) HSP 1 Score: 223.016 bits (567), Expect = 6.161e-60 Identity = 112/156 (71.79%), Postives = 127/156 (81.41%), Query Frame = 2 Query: 125 LSFNGSGAATSVPSSSFFGTSLKKV-SSRIPPSKVPSASFKITA---EVDENKQTKQDRWKGLAYDESDDQQDITRGKGAVDSLFQAPMGTGTHYAVMSSYDYISQGLRTYNLDNTIDGLYIAPAFMDKLVVHITKNFMSLPNIKVPLILGIWEAK 580 L+ NGSG S PSS+FFGTSLKKV SSR+P SK+ S SFKI A E++E +QT+ DRW+GLAYD SDDQQDITRGKG VDSLFQAPM GTHYAV+SS+ Y+S GLR YN DN DG YIAPAF+DKLVVHI KNFM+LPNIKVPLILG+W K Sbjct: 16 LNLNGSGGGASGPSSAFFGTSLKKVISSRVPNSKLTSGSFKIVAADKEIEETQQTEGDRWRGLAYDVSDDQQDITRGKGLVDSLFQAPMDAGTHYAVISSHKYLSAGLRQYNFDNIKDGFYIAPAFLDKLVVHIAKNFMTLPNIKVPLILGVWGGK 171 HSP 2 Score: 30.0314 bits (66), Expect = 6.161e-60 Identity = 22/61 (36.07%), Postives = 30/61 (49.18%), Query Frame = 1 Query: 559 LGNLGSKGQGNHSNVTW-FPQDGLNPIMMNAENWKVDMLENP-YIHQARYREAIEFTGRKK 735 LG G KGQG F + G+NPIMM+A + P + + RYREA + + K Sbjct: 165 LGVWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREASDLIKKGK 225
BLAST of EY717722 vs. ExPASy Swiss-Prot
Match: RCA1_TOBAC (Ribulose bisphosphate carboxylase/oxygenase activase 1, chloroplastic OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 216.853 bits (551), Expect = 3.295e-58 Identity = 110/157 (70.06%), Postives = 123/157 (78.34%), Query Frame = 2 Query: 122 PLSFNGSGAATSVPSSSFFGTSLKKVSSR-IPPSKVPSASFKITAE---VDENKQTKQDRWKGLAYDESDDQQDITRGKGAVDSLFQAPMGTGTHYAVMSSYDYISQGLRTYNLDNTIDGLYIAPAFMDKLVVHITKNFMSLPNIKVPLILGIWEAK 580 PLS N S A TSVPS++FFG +LKKV + + KV + S +I AE VD KQT DRWKGL D SDDQQDITRGKG VDSLFQAP GTGTH+AV+ SY+Y+SQGLR YNLDN +DG YIAPAFMDKLVVHITKNF+ LPNIKVPLILGIW K Sbjct: 15 PLSLNNSVAGTSVPSTAFFGKTLKKVYGKGVSSPKVTNKSLRIVAEQIDVDPKKQTDSDRWKGLVQDFSDDQQDITRGKGMVDSLFQAPTGTGTHHAVLQSYEYVSQGLRQYNLDNKLDGFYIAPAFMDKLVVHITKNFLKLPNIKVPLILGIWGGK 171 HSP 2 Score: 30.4166 bits (67), Expect = 3.295e-58 Identity = 22/55 (40.00%), Postives = 28/55 (50.91%), Query Frame = 1 Query: 559 LGNLGSKGQGNHSNVTW-FPQDGLNPIMMNAENWKVDMLENP-YIHQARYREAIE 717 LG G KGQG F + G+NPIMM+A + P + + RYREA E Sbjct: 165 LGIWGGKGQGKSFQCELVFRKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAE 219
BLAST of EY717722 vs. ExPASy Swiss-Prot
Match: RCA2_TOBAC (Ribulose bisphosphate carboxylase/oxygenase activase 2, chloroplastic OS=Nicotiana tabacum GN=RCA PE=2 SV=1) HSP 1 Score: 213.386 bits (542), Expect = 3.586e-57 Identity = 107/161 (66.46%), Postives = 123/161 (76.40%), Query Frame = 2 Query: 110 AAAVPLSFNGSGAATSVPSSSFFGTSLKKVSSR-IPPSKVPSASFKITAE---VDENKQTKQDRWKGLAYDESDDQQDITRGKGAVDSLFQAPMGTGTHYAVMSSYDYISQGLRTYNLDNTIDGLYIAPAFMDKLVVHITKNFMSLPNIKVPLILGIWEAK 580 A PLS N S A TSVPS++FFG +LKKV + + KV + S +I AE D KQT DRWKGL D SDDQQDI RGKG VDSLFQAP GTGTH+AV+ SY+Y+SQGLR YN+DNT+DG YIAP+FMDKLVVHITKNF+ LPNIKVPLILG+W K Sbjct: 11 ANKAPLSLNNSVAGTSVPSTAFFGKTLKKVYGKGVSSPKVTNRSLRIAAEEKDADPKKQTYSDRWKGLVQDFSDDQQDIARGKGMVDSLFQAPTGTGTHHAVLQSYEYVSQGLRQYNMDNTLDGFYIAPSFMDKLVVHITKNFLKLPNIKVPLILGVWGGK 171 HSP 2 Score: 30.4166 bits (67), Expect = 3.586e-57 Identity = 22/55 (40.00%), Postives = 28/55 (50.91%), Query Frame = 1 Query: 559 LGNLGSKGQGNHSNVTW-FPQDGLNPIMMNAENWKVDMLENP-YIHQARYREAIE 717 LG G KGQG F + G+NPIMM+A + P + + RYREA E Sbjct: 165 LGVWGGKGQGKSFQCELVFRKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAE 219
BLAST of EY717722 vs. ExPASy Swiss-Prot
Match: RCA_SOLPN (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Solanum pennellii PE=2 SV=1) HSP 1 Score: 208.379 bits (529), Expect = 1.126e-55 Identity = 105/159 (66.04%), Postives = 127/159 (79.87%), Query Frame = 2 Query: 110 AAAVPLSFNGSGAATSVPSSSFFGTSLKKVSSR-IPPSKVPSASFKITA-EVDENKQTKQDRWKGLAYDESDDQQDITRGKGAVDSLFQAPMGTGTHYAVMSSYDYISQGLRTYNLDNTIDGLYIAPAFMDKLVVHITKNFMSLPNIKVPLILGIWEAK 580 A+ PLS N S A TSVPS++FFG SLKKV ++ + KV + + ++ A EVDE TK+DRWKGL + SDDQQDI RGKG VDSLFQAP GTGTH+A+M+SY+Y+SQ L+TY LDN +DG YIAPAFMDKLVVHITKNF++LPNIKVPLILG+W K Sbjct: 11 ASKAPLSLNNSVAGTSVPSTAFFGKSLKKVYAKGVSSPKVSNRNLRVVAQEVDE---TKEDRWKGLYDNTSDDQQDIARGKGLVDSLFQAPTGTGTHHAIMNSYEYVSQALKTYQLDNKLDGFYIAPAFMDKLVVHITKNFLTLPNIKVPLILGVWGGK 166 HSP 2 Score: 30.4166 bits (67), Expect = 1.126e-55 Identity = 22/55 (40.00%), Postives = 28/55 (50.91%), Query Frame = 1 Query: 559 LGNLGSKGQGNHSNVTW-FPQDGLNPIMMNAENWKVDMLENP-YIHQARYREAIE 717 LG G KGQG F + G+NPIMM+A + P + + RYREA E Sbjct: 160 LGVWGGKGQGKSFQCELVFRKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAE 214
BLAST of EY717722 vs. ExPASy Swiss-Prot
Match: RCA_ARATH (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Arabidopsis thaliana GN=RCA PE=1 SV=2) HSP 1 Score: 216.083 bits (549), Expect = 2.166e-55 Identity = 113/168 (67.26%), Postives = 130/168 (77.38%), Query Frame = 2 Query: 107 MAAAV---------PLSFNGSGA-ATSVPSSSFFGTSLKKVSSRIPPSKVPSASFKITAEVDENKQTKQDRWKGLAYDESDDQQDITRGKGAVDSLFQAPMGTGTHYAVMSSYDYISQGLRTYNLDNTIDGLYIAPAFMDKLVVHITKNFMSLPNIKVPLILGIWEAK 580 MAAAV PLS NGSG+ A S P+S+F G + VS +K + SFK+ A V E+KQT DRW+GLAYD SDDQQDITRGKG VDS+FQAPMGTGTH+AV+SSY+Y+SQGLR YNLDN +DG YIAPAFMDKLVVHITKNF++LPNIKVPLILGIW K Sbjct: 1 MAAAVSTVGAINRAPLSLNGSGSGAVSAPASTFLGKKVVTVSRFAQSNKKSNGSFKVLA-VKEDKQTDGDRWRGLAYDTSDDQQDITRGKGMVDSVFQAPMGTGTHHAVLSSYEYVSQGLRQYNLDNMMDGFYIAPAFMDKLVVHITKNFLTLPNIKVPLILGIWGGK 167
BLAST of EY717722 vs. ExPASy Swiss-Prot
Match: RCA_CUCSA (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Cucumis sativus PE=2 SV=1) HSP 1 Score: 207.223 bits (526), Expect = 2.498e-55 Identity = 102/160 (63.75%), Postives = 122/160 (76.25%), Query Frame = 2 Query: 101 SLMAAAVPLSFNGSGAATSVPSSSFFGTSLKKVSSRIPPSKVPSASFKITAEVDENKQTKQDRWKGLAYDESDDQQDITRGKGAVDSLFQAPMGTGTHYAVMSSYDYISQGLRTYNLDNTIDGLYIAPAFMDKLVVHITKNFMSLPNIKVPLILGIWEAK 580 S + A + N S VP+S+F G+ LK VSSR SK+ + +FKI AE DE KQT++D+W+GLA+D SDDQQDITRGKG D LFQAPMGTGTH AV+SSY+YIS GLR Y+ DN +DG YIAPAFMDKL VHI KNF++LPNIKVPLILG+W K Sbjct: 6 STIGAVNRTTLNNSNYGGLVPNSAFLGSRLK-VSSRFTTSKMVTGNFKIVAEQDEEKQTEKDKWRGLAFDTSDDQQDITRGKGLADPLFQAPMGTGTHNAVLSSYEYISAGLRDYSYDNNVDGFYIAPAFMDKLTVHIVKNFLTLPNIKVPLILGVWGGK 164 HSP 2 Score: 30.4166 bits (67), Expect = 2.498e-55 Identity = 22/61 (36.07%), Postives = 30/61 (49.18%), Query Frame = 1 Query: 559 LGNLGSKGQGNHSNVTW-FPQDGLNPIMMNAENWKVDMLENP-YIHQARYREAIEFTGRKK 735 LG G KGQG F + G+NPIMM+A + P + + RYREA + + K Sbjct: 158 LGVWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIKKGK 218 The following BLAST results are available for this feature:
BLAST of EY717722 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 17
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Sequences
The
following sequences are available for this feature:
EST sequence >EY717722 ID=EY717722; Name=EY717722; organism=Citrus sinensis; type=EST; length=886bpback to top |