CV885160
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV885160 vs. ExPASy Swiss-Prot
Match: RL5_CUCSA (60S ribosomal protein L5 OS=Cucumis sativus GN=RPL5 PE=2 SV=1) HSP 1 Score: 261.151 bits (666), Expect = 5.006e-69 Identity = 133/179 (74.30%), Postives = 146/179 (81.56%), Query Frame = -2 Query: 265 LKMLEMDAEYEGHVEATGEDYSVEPTENRRPFRALLDVGLVKTTTGNRVFXXXXXXXXXXXDIPHSEKRFAGFSKDSKQLDAEVHRKYIYCGHVAAYMRTLMEDEPEKYQSHFCEYIKRGIEADNLEELYKKVHAAIRADPNQXXXXXXXXXXXKRYNLKKLTYEERKARLVERLKALN 801 LKMLEMDAEYEG+VEATGEDYSVEP + RRPFRALLDVGL++TTTGNRVF DIPHS+KRFAG++K+ +QLD EVHRKYI+ GHVAAYMRTLMEDEPEKYQSHF EYIK+GIEAD LE LYKKVHAAIRA+P KRYNLKKLTY+ERKARLVERL ALN Sbjct: 110 LKMLEMDAEYEGNVEATGEDYSVEPADTRRPFRALLDVGLIRTTTGNRVFGALKGALDGGLDIPHSDKRFAGYAKNGQQLDVEVHRKYIFGGHVAAYMRTLMEDEPEKYQSHFSEYIKKGIEADELEGLYKKVHAAIRANPIAKKSDKPQPKAHKRYNLKKLTYDERKARLVERLNALN 288
BLAST of CV885160 vs. ExPASy Swiss-Prot
Match: RL51_ARATH (60S ribosomal protein L5-1 OS=Arabidopsis thaliana GN=ATL5 PE=2 SV=2) HSP 1 Score: 250.366 bits (638), Expect = 8.837e-66 Identity = 124/179 (69.27%), Postives = 145/179 (81.01%), Query Frame = -2 Query: 265 LKMLEMDAEYEGHVEATGEDYSVEPTENRRPFRALLDVGLVKTTTGNRVFXXXXXXXXXXXDIPHSEKRFAGFSKDSKQLDAEVHRKYIYCGHVAAYMRTLMEDEPEKYQSHFCEYIKRGIEADNLEELYKKVHAAIRADPNQXXXXXXXXXXXKRYNLKKLTYEERKARLVERLKALN 801 LKMLEMD EYEG+VEATGED+SVEPT++RRPFRALLDVGL++TTTGNRVF DIPHS+KRFAGF K++KQLDAE+HR YIY GHV+ YM+ L EDEPEK Q+HF YIK+G+EA+++EELYKKVHAAIRADPN KRYNLKKLTYEERK +L+ER+KALN Sbjct: 110 LKMLEMDDEYEGNVEATGEDFSVEPTDSRRPFRALLDVGLIRTTTGNRVFGALKGALDGGLDIPHSDKRFAGFHKENKQLDAEIHRNYIYGGHVSNYMKLLGEDEPEKLQTHFSAYIKKGVEAESIEELYKKVHAAIRADPNPKKTVKPAPKQHKRYNLKKLTYEERKNKLIERVKALN 288
BLAST of CV885160 vs. ExPASy Swiss-Prot
Match: RL52_ARATH (60S ribosomal protein L5-2 OS=Arabidopsis thaliana GN=RPL5B PE=2 SV=3) HSP 1 Score: 248.44 bits (633), Expect = 3.358e-65 Identity = 122/179 (68.16%), Postives = 145/179 (81.01%), Query Frame = -2 Query: 265 LKMLEMDAEYEGHVEATGEDYSVEPTENRRPFRALLDVGLVKTTTGNRVFXXXXXXXXXXXDIPHSEKRFAGFSKDSKQLDAEVHRKYIYCGHVAAYMRTLMEDEPEKYQSHFCEYIKRGIEADNLEELYKKVHAAIRADPNQXXXXXXXXXXXKRYNLKKLTYEERKARLVERLKALN 801 LKMLEMD EYEG+VEATGED+SVEPT++RRPFRALLDVGL++TTTGNRVF DIPHS+KRFAGF K++KQLDAE+HR YIY GHV+ YM+ L EDEPEK Q+HF YIK+G+EA+++EE+YKKVHAAIRA+PN KRYNLKKLTYEERK +L+ER+KALN Sbjct: 110 LKMLEMDDEYEGNVEATGEDFSVEPTDSRRPFRALLDVGLIRTTTGNRVFGALKGALDGGLDIPHSDKRFAGFHKENKQLDAEIHRNYIYGGHVSNYMKLLGEDEPEKLQTHFSAYIKKGVEAESIEEMYKKVHAAIRAEPNHKKTEKSAPKEHKRYNLKKLTYEERKNKLIERVKALN 288
BLAST of CV885160 vs. ExPASy Swiss-Prot
Match: RL51_ORYSJ (60S ribosomal protein L5-1 OS=Oryza sativa subsp. japonica GN=RPL5A PE=2 SV=1) HSP 1 Score: 241.506 bits (615), Expect = 4.105e-63 Identity = 118/179 (65.92%), Postives = 139/179 (77.65%), Query Frame = -2 Query: 265 LKMLEMDAEYEGHVEATGEDYSVEPTENRRPFRALLDVGLVKTTTGNRVFXXXXXXXXXXXDIPHSEKRFAGFSKDSKQLDAEVHRKYIYCGHVAAYMRTLMEDEPEKYQSHFCEYIKRGIEADNLEELYKKVHAAIRADPNQXXXXXXXXXXXKRYNLKKLTYEERKARLVERLKALN 801 LK+ +D EYEG++EATGEDY VEP + RRPFRALLDVGL++TTTGNRVF DIPHS+KRFAGF KD KQLD+++HRKYIY GHVA YMR++ E+EPEK+Q+HF EY+K+GI+AD +E LYKKVHAAIRADP KRYNLKKLTYE+RKA LVERL ALN Sbjct: 111 LKLRGLDQEYEGNIEATGEDYYVEPADERRPFRALLDVGLIRTTTGNRVFGALKGALDGGLDIPHSDKRFAGFKKDEKQLDSDIHRKYIYGGHVADYMRSMAEEEPEKFQAHFSEYLKKGIDADGMEALYKKVHAAIRADPTMAKSTKKEPATHKRYNLKKLTYEQRKASLVERLNALN 289
BLAST of CV885160 vs. ExPASy Swiss-Prot
Match: RL51_ORYSI (60S ribosomal protein L5-1 OS=Oryza sativa subsp. indica GN=RPL5A PE=2 SV=2) HSP 1 Score: 241.506 bits (615), Expect = 4.105e-63 Identity = 118/179 (65.92%), Postives = 139/179 (77.65%), Query Frame = -2 Query: 265 LKMLEMDAEYEGHVEATGEDYSVEPTENRRPFRALLDVGLVKTTTGNRVFXXXXXXXXXXXDIPHSEKRFAGFSKDSKQLDAEVHRKYIYCGHVAAYMRTLMEDEPEKYQSHFCEYIKRGIEADNLEELYKKVHAAIRADPNQXXXXXXXXXXXKRYNLKKLTYEERKARLVERLKALN 801 LK+ +D EYEG++EATGEDY VEP + RRPFRALLDVGL++TTTGNRVF DIPHS+KRFAGF KD KQLD+++HRKYIY GHVA YMR++ E+EPEK+Q+HF EY+K+GI+AD +E LYKKVHAAIRADP KRYNLKKLTYE+RKA LVERL ALN Sbjct: 111 LKLRGLDQEYEGNIEATGEDYYVEPADERRPFRALLDVGLIRTTTGNRVFGALKGALDGGLDIPHSDKRFAGFKKDEKQLDSDIHRKYIYGGHVADYMRSMAEEEPEKFQAHFSEYLKKGIDADGMEALYKKVHAAIRADPTMAKSTKKEPATHKRYNLKKLTYEQRKASLVERLNALN 289
BLAST of CV885160 vs. ExPASy Swiss-Prot
Match: RL52_ORYSJ (60S ribosomal protein L5-2 OS=Oryza sativa subsp. japonica GN=RPL5B PE=3 SV=1) HSP 1 Score: 239.965 bits (611), Expect = 1.194e-62 Identity = 118/179 (65.92%), Postives = 138/179 (77.09%), Query Frame = -2 Query: 265 LKMLEMDAEYEGHVEATGEDYSVEPTENRRPFRALLDVGLVKTTTGNRVFXXXXXXXXXXXDIPHSEKRFAGFSKDSKQLDAEVHRKYIYCGHVAAYMRTLMEDEPEKYQSHFCEYIKRGIEADNLEELYKKVHAAIRADPNQXXXXXXXXXXXKRYNLKKLTYEERKARLVERLKALN 801 L + +D EYEG+VEATGEDY VEP + RRPFRALLDVGL++TTTGNRVF DIPHS+KRFAGF KD KQLD+++HRKYIY GHVA YMR++ E+EPEK+Q+HF EY+K+GI+AD +E LYKKVHAAIRADP KRYNLKKLTYE+RKA LVERL ALN Sbjct: 111 LTLRGLDQEYEGNVEATGEDYYVEPADERRPFRALLDVGLIRTTTGNRVFGALKGALDGGLDIPHSDKRFAGFKKDEKQLDSDIHRKYIYGGHVADYMRSMAEEEPEKFQAHFSEYLKKGIDADGMESLYKKVHAAIRADPTMAKSTKKEPATHKRYNLKKLTYEQRKASLVERLNALN 289
BLAST of CV885160 vs. ExPASy Swiss-Prot
Match: RL5_LYSTE (60S ribosomal protein L5 OS=Lysiphlebus testaceipes GN=RpL5 PE=2 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 1.018e-37 Identity = 82/178 (46.07%), Postives = 113/178 (63.48%), Query Frame = -2 Query: 271 LKMLEMDAEYEGHVEATGEDYSVEPTENRR-PFRALLDVGLVKTTTGNRVFXXXXXXXXXXXDIPHSEKRFAGFSKDSKQLDAEVHRKYIYCGHVAAYMRTLMEDEPEKYQSHFCEYIKRGIEADNLEELYKKVHAAIRADPNQXXXXXXXXXXXKRYNLKKLTYEERKARLVERLKA 801 LK L++D Y G E G++Y+VE ++ FR LD GL++TTTG R+F +IPHS KRF G+ +SK +A+VHR++I+ H+A YM+TL E+EPE +Q F +YIK GI AD +EE+YKK H AIRADP++ KR+N KLT ERK R V+++KA Sbjct: 110 LKQLKLDTLYTGTTEVDGDEYNVEEHDDGPGAFRCYLDTGLMRTTTGARIFGAMKGAVDGGLNIPHSTKRFPGYDNESKSFNADVHRQHIFAHHIANYMKTLEENEPENFQRQFSQYIKNGITADGIEEMYKKAHEAIRADPDRAEIVKTKEPVKKRWNRAKLTLSERKDR-VKQIKA 286
BLAST of CV885160 vs. ExPASy Swiss-Prot
Match: RL5_SOLME (60S ribosomal protein L5 (Fragment) OS=Solanum melongena GN=RPL5 PE=2 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 8.619e-37 Identity = 77/106 (72.64%), Postives = 83/106 (78.30%), Query Frame = -2 Query: 265 SKDSKQLDAEVHRKYIYCGHVAAYMRTLMEDEPEKYQSHFCEYIKRGIEADNLEELYKKVHAAIRADPNQXXXXXXXXXXXKRYNLKKLTYEERKARLVERLKALN 582 SKDSKQLDAEVHRKYIY GHVAAYM LMEDEPEKYQSHF YIK + DN+EE+YKKVHAAIR DP+ KRYNLKKLTYEERKA+L+ERL ALN Sbjct: 2 SKDSKQLDAEVHRKYIYGGHVAAYMNILMEDEPEKYQSHFSSYIKADLAPDNIEEMYKKVHAAIRPDPSPKKSQKQPPKTHKRYNLKKLTYEERKAKLIERLNALN 107
BLAST of CV885160 vs. ExPASy Swiss-Prot
Match: RL5_CAEBR (60S ribosomal protein L5 OS=Caenorhabditis briggsae GN=rpl-5 PE=3 SV=2) HSP 1 Score: 152.91 bits (385), Expect = 1.920e-36 Identity = 78/178 (43.82%), Postives = 113/178 (63.48%), Query Frame = -2 Query: 268 LKMLEMDAEYEGHVEATGEDYSVEPTENRRPFRALLDVGLVKTTTGNRVFXXXXXXXXXXXDIPHSEKRFAGFSKDSKQLDAEVHRKYIYCGHVAAYMRTLMEDEPEKYQSHFCEYIKRGIEADNLEELYKKVHAAIRADPNQXXXXXXXXXXXKRYNLKKLTYEERKARLVERLKAL 801 LK + +D+ Y+GH E TGEDY+VE +R PF+A+LD+GL +TTTG+++F ++PHSE RF GF ++SK +AE HR I HVA YM L E++ ++Y+ F +++ G+ ADNL Y+K HA IRADP+ KR+ K+LTY+ERK R+ ++ KAL Sbjct: 110 LKAIGLDSTYKGHEELTGEDYNVEEEGDRAPFKAVLDIGLARTTTGSKIFAVMKGVADGGINVPHSESRFFGFDQESKDYNAEAHRDRILGKHVADYMSLLKEEDEDRYKRQFSKFLSNGMNADNLVATYQKAHANIRADPS--PSAKKAAKPSKRHTAKRLTYDERKQRVADK-KAL 284
BLAST of CV885160 vs. ExPASy Swiss-Prot
Match: RL5_CAEEL (60S ribosomal protein L5 OS=Caenorhabditis elegans GN=rpl-5 PE=2 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 2.508e-36 Identity = 78/178 (43.82%), Postives = 115/178 (64.61%), Query Frame = -2 Query: 268 LKMLEMDAEYEGHVEATGEDYSVEPTENRRPFRALLDVGLVKTTTGNRVFXXXXXXXXXXXDIPHSEKRFAGFSKDSKQLDAEVHRKYIYCGHVAAYMRTLMEDEPEKYQSHFCEYIKRGIEADNLEELYKKVHAAIRADPNQXXXXXXXXXXXKRYNLKKLTYEERKARLVERLKAL 801 LK + +D+ Y+GH E TGEDY+VE +R PF+A+LD+GL +TTTG+++F ++PHSE RF GF ++SK+ +AE HR I HVA YM L E++ ++Y+ F +++ G+ ADNL Y+KVH+AIRAD + KR+ K+LTY+ERK R+ ++ KAL Sbjct: 110 LKTIGLDSTYKGHEELTGEDYNVEEEGDRAPFKAVLDIGLARTTTGSKIFAVMKGVADGGINVPHSESRFFGFDQESKEYNAEAHRDRILGKHVADYMTYLKEEDEDRYKRQFSKFLAAGLNADNLVATYQKVHSAIRADAS--PAAKKAAKPSKRHTAKRLTYDERKQRVADK-KAL 284 The following BLAST results are available for this feature:
BLAST of CV885160 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 36
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Sequences
The
following sequences are available for this feature:
EST sequence >CV885160 ID=CV885160; Name=CV885160; organism=Citrus sinensis; type=EST; length=802bpback to top |