CX043267
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX043267 vs. ExPASy Swiss-Prot
Match: CWC15_EMENI (Pre-mRNA-splicing factor cwc15 OS=Emericella nidulans GN=cwc15 PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 4.037e-16 Identity = 39/57 (68.42%), Postives = 48/57 (84.21%), Query Frame = -1 Query: 277 GNPLLNNPTSFNVKRRWDDDVVFKNQARG-ETKTPKRFINDTIRNDFHRKFLQKYMK 444 GNPLLN P+ FN+KRRWDDDVVFKNQARG E K K F+ND +R+DFH+KF+ KY++ Sbjct: 177 GNPLLN-PSDFNIKRRWDDDVVFKNQARGTEDKRGKEFVNDLLRSDFHKKFMSKYVR 232
BLAST of CX043267 vs. ExPASy Swiss-Prot
Match: CW15A_XENLA (Protein CWC15 homolog A OS=Xenopus laevis GN=cwc15-A PE=2 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 5.830e-15 Identity = 40/68 (58.82%), Postives = 51/68 (75.00%), Query Frame = -1 Query: 277 LLVGNPLLN-------NPTSFNVKRRWDDDVVFKNQARG--ETKTPKRFINDTIRNDFHRKFLQKYMK 453 +L GNPLLN + SF VKRRWDDDVVFKN A+G E K KRF+NDT+R++FH+KF++KY+K Sbjct: 161 ILSGNPLLNLTGPAAQSQASFKVKRRWDDDVVFKNCAKGVDEMKKQKRFVNDTLRSEFHKKFMEKYIK 228
BLAST of CX043267 vs. ExPASy Swiss-Prot
Match: CWC15_XENTR (Protein CWC15 homolog OS=Xenopus tropicalis GN=cwc15 PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.299e-14 Identity = 39/67 (58.21%), Postives = 51/67 (76.12%), Query Frame = -1 Query: 277 LLVGNPLLN------NPTSFNVKRRWDDDVVFKNQARG--ETKTPKRFINDTIRNDFHRKFLQKYMK 453 +L GNPLLN + +F VKRRWDDDVVFKN A+G E K KRF+NDT+R++FH+KF++KY+K Sbjct: 161 ILSGNPLLNLTGPAQSVAAFKVKRRWDDDVVFKNCAKGVDEMKKDKRFVNDTLRSEFHKKFMEKYIK 227
BLAST of CX043267 vs. ExPASy Swiss-Prot
Match: CWC15_RAT (Protein CWC15 homolog OS=Rattus norvegicus GN=Cwc15 PE=2 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 4.935e-14 Identity = 38/67 (56.72%), Postives = 50/67 (74.63%), Query Frame = -1 Query: 277 LLVGNPLLN------NPTSFNVKRRWDDDVVFKNQARG--ETKTPKRFINDTIRNDFHRKFLQKYMK 453 +L GNPLLN +F VKRRWDDDVVFKN A+G + K KRF+NDT+R++FH+KF++KY+K Sbjct: 163 ILSGNPLLNLTGPSQPQANFKVKRRWDDDVVFKNCAKGIDDQKKDKRFVNDTLRSEFHKKFMEKYIK 229
BLAST of CX043267 vs. ExPASy Swiss-Prot
Match: CWC15_PONAB (Protein CWC15 homolog OS=Pongo abelii GN=CWC15 PE=2 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 4.935e-14 Identity = 38/67 (56.72%), Postives = 50/67 (74.63%), Query Frame = -1 Query: 277 LLVGNPLLN------NPTSFNVKRRWDDDVVFKNQARG--ETKTPKRFINDTIRNDFHRKFLQKYMK 453 +L GNPLLN +F VKRRWDDDVVFKN A+G + K KRF+NDT+R++FH+KF++KY+K Sbjct: 163 ILSGNPLLNLTGPSQPQANFKVKRRWDDDVVFKNCAKGVDDQKKDKRFVNDTLRSEFHKKFMEKYIK 229
BLAST of CX043267 vs. ExPASy Swiss-Prot
Match: CWC15_MOUSE (Protein CWC15 homolog OS=Mus musculus GN=Cwc15 PE=1 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 4.935e-14 Identity = 38/67 (56.72%), Postives = 50/67 (74.63%), Query Frame = -1 Query: 277 LLVGNPLLN------NPTSFNVKRRWDDDVVFKNQARG--ETKTPKRFINDTIRNDFHRKFLQKYMK 453 +L GNPLLN +F VKRRWDDDVVFKN A+G + K KRF+NDT+R++FH+KF++KY+K Sbjct: 163 ILSGNPLLNLTGPSQPQANFKVKRRWDDDVVFKNCAKGIDDQKKDKRFVNDTLRSEFHKKFMEKYIK 229
BLAST of CX043267 vs. ExPASy Swiss-Prot
Match: CWC15_HUMAN (Protein CWC15 homolog OS=Homo sapiens GN=CWC15 PE=1 SV=2) HSP 1 Score: 78.5666 bits (192), Expect = 4.935e-14 Identity = 38/67 (56.72%), Postives = 50/67 (74.63%), Query Frame = -1 Query: 277 LLVGNPLLN------NPTSFNVKRRWDDDVVFKNQARG--ETKTPKRFINDTIRNDFHRKFLQKYMK 453 +L GNPLLN +F VKRRWDDDVVFKN A+G + K KRF+NDT+R++FH+KF++KY+K Sbjct: 163 ILSGNPLLNLTGPSQPQANFKVKRRWDDDVVFKNCAKGVDDQKKDKRFVNDTLRSEFHKKFMEKYIK 229
BLAST of CX043267 vs. ExPASy Swiss-Prot
Match: CWC15_BOVIN (Protein CWC15 homolog OS=Bos taurus GN=CWC15 PE=2 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 4.935e-14 Identity = 38/67 (56.72%), Postives = 50/67 (74.63%), Query Frame = -1 Query: 277 LLVGNPLLN------NPTSFNVKRRWDDDVVFKNQARG--ETKTPKRFINDTIRNDFHRKFLQKYMK 453 +L GNPLLN +F VKRRWDDDVVFKN A+G + K KRF+NDT+R++FH+KF++KY+K Sbjct: 165 ILSGNPLLNLTGPSQPQANFKVKRRWDDDVVFKNCAKGVDDQKKDKRFVNDTLRSEFHKKFMEKYIK 231
BLAST of CX043267 vs. ExPASy Swiss-Prot
Match: CW15B_XENLA (Protein CWC15 homolog B OS=Xenopus laevis GN=cwc15-B PE=2 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 6.445e-14 Identity = 38/70 (54.29%), Postives = 51/70 (72.86%), Query Frame = -1 Query: 277 LLVGNPLLN-------NPTSFNVKRRWDDDVVFKNQARG----ETKTPKRFINDTIRNDFHRKFLQKYMK 453 +L GNPLLN + SF VKRRWDDDVVFKN A+G + + KRF+NDT+R++FH+KF++KY+K Sbjct: 161 ILSGNPLLNLTGPAAQSQASFKVKRRWDDDVVFKNCAKGVDEMKKRQDKRFVNDTLRSEFHKKFMEKYVK 230
BLAST of CX043267 vs. ExPASy Swiss-Prot
Match: CWC15_DANRE (Protein CWC15 homolog OS=Danio rerio GN=cwc15 PE=2 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.875e-13 Identity = 38/77 (49.35%), Postives = 52/77 (67.53%), Query Frame = -1 Query: 277 LLVGNPLLN----------------NPTSFNVKRRWDDDVVFKNQARG--ETKTPKRFINDTIRNDFHRKFLQKYMK 453 +L GNPLLN +F+VKRRWDDDVVFKN A+G E++ KRF+NDT+R++FH+KF++KY+K Sbjct: 167 ILSGNPLLNLAGQQQQQQQQQQQTQTKNTFSVKRRWDDDVVFKNCAKGVDESRKEKRFVNDTLRSEFHKKFMEKYVK 243 The following BLAST results are available for this feature:
BLAST of CX043267 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 11
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Sequences
The
following sequences are available for this feature:
EST sequence >CX043267 ID=CX043267; Name=CX043267; organism=Citrus sinensis; type=EST; length=834bpback to top |