CV884945

Overview
NameCV884945
Unique NameCV884945
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length913
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CV884945_ssr701 microsatellite CV884945_ssr701:701..712. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig3378 contig Csv1_Contig3378:526..1440. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CV884945 vs. ExPASy Swiss-Prot
Match: FEI1_ARATH (LRR receptor-like serine/threonine-protein kinase FEI 1 OS=Arabidopsis thaliana GN=FEI1 PE=1 SV=1)

HSP 1 Score: 261.536 bits (667), Expect = 4.721e-69
Identity = 126/142 (88.73%), Postives = 137/142 (96.48%), Query Frame = -1
Query:  488 LAKLLEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESEVMTPCPSDFYDSNSD 913
            LAKLLEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLN+VGWL FLISE R R+I+DPNCEG+Q ESLDALL++ATQCVS SP++RPTMHRVVQ+LESEVMTPCPS+FYDS+SD
Sbjct:  450 LAKLLEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNVVGWLKFLISEKRPRDIVDPNCEGMQMESLDALLSIATQCVSPSPEERPTMHRVVQLLESEVMTPCPSEFYDSSSD 591          
BLAST of CV884945 vs. ExPASy Swiss-Prot
Match: FEI2_ARATH (LRR receptor-like serine/threonine-protein kinase FEI 2 OS=Arabidopsis thaliana GN=FEI2 PE=1 SV=1)

HSP 1 Score: 258.455 bits (659), Expect = 3.996e-68
Identity = 126/142 (88.73%), Postives = 137/142 (96.48%), Query Frame = -1
Query:  488 LAKLLEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESEVMTPCPSDFYDSNSD 913
            LAKLLEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGK PTDASFIEKG NIVGWLNFLISE+R +EI+D +CEGV+ ESLDALL++AT+CVSSSPD+RPTMHRVVQ+LESEVMTPCPSDFYDS+SD
Sbjct:  448 LAKLLEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKLPTDASFIEKGFNIVGWLNFLISENRAKEIVDLSCEGVERESLDALLSIATKCVSSSPDERPTMHRVVQLLESEVMTPCPSDFYDSSSD 589          
BLAST of CV884945 vs. ExPASy Swiss-Prot
Match: Y2296_ARATH (Probable receptor-like protein kinase At2g42960 OS=Arabidopsis thaliana GN=At2g42960 PE=2 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 2.453e-25
Identity = 59/128 (46.09%), Postives = 82/128 (64.06%), Query Frame = -1
Query:  533 LAKLLEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPNCEGVQSES-LDALLAVATQCVSSSPDDRPTMHRVVQILESE 913
            LAKLL+  ESHITT V GTFGY+APEY  +G   EK+D+YSFGVL+LE ++G+ P D       +N+V WL  ++   R  E++DP  E   S+S L   L V+ +CV    + RP M +V ++LES+
Sbjct:  330 LAKLLDSGESHITTRVMGTFGYVAPEYANTGLLNEKSDIYSFGVLLLEAITGRDPVDYGRPANEVNLVEWLKMMVGTRRAEEVVDPRLEPRPSKSALKRALLVSLRCVDPEAEKRPRMSQVARMLESD 457          
BLAST of CV884945 vs. ExPASy Swiss-Prot
Match: Y1154_ARATH (Probable serine/threonine-protein kinase At1g01540 OS=Arabidopsis thaliana GN=At1g01540 PE=1 SV=2)

HSP 1 Score: 115.931 bits (289), Expect = 3.204e-25
Identity = 55/128 (42.97%), Postives = 83/128 (64.84%), Query Frame = -1
Query:  533 LAKLLEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPNC-EGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESE 913
            LAKLL  E S++TT V GTFGY+APEY  +G   EK+D+YSFG+L++E+++G+ P D S  +   N+V WL  ++   R  E++DP   E   S++L  +L VA +CV    + RP M  ++ +LE+E
Sbjct:  301 LAKLLGSESSYVTTRVMGTFGYVAPEYACTGMLNEKSDIYSFGILIMEIITGRNPVDYSRPQGETNLVDWLKSMVGNRRSEEVVDPKIPEPPSSKALKRVLLVALRCVDPDANKRPKMGHIIHMLEAE 428          
BLAST of CV884945 vs. ExPASy Swiss-Prot
Match: EXS_ARATH (Leucine-rich repeat receptor protein kinase EXS OS=Arabidopsis thaliana GN=EXS PE=1 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 1.139e-22
Identity = 58/127 (45.67%), Postives = 84/127 (66.14%), Query Frame = -1
Query:  539 LAKLLEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIE-KGLNIVGWLNFLISEDRQREIIDPNCEGVQ-SESLDALLAVATQCVSSSPDDRPTMHRVVQILE 913
            LA+L+   ESH++T++AGTFGY+ PEY QS RAT K DVYSFGV++LE+++GK PT   F E +G N+VGW    I++ +  ++IDP    V    S   LL +A  C++ +P  RP M  V++ L+
Sbjct: 1064 LARLISACESHVSTVIAGTFGYIPPEYGQSARATTKGDVYSFGVILLELVTGKEPTGPDFKESEGGNLVGWAIQKINQGKAVDVIDPLLVSVALKNSQLRLLQIAMLCLAETPAKRPNMLDVLKALK 1190          
BLAST of CV884945 vs. ExPASy Swiss-Prot
Match: BAK1_ARATH (BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 OS=Arabidopsis thaliana GN=BAK1 PE=1 SV=2)

HSP 1 Score: 104.76 bits (260), Expect = 7.385e-22
Identity = 48/130 (36.92%), Postives = 90/130 (69.23%), Query Frame = -1
Query:  533 LAKLLEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFI--EKGLNIVGWLNFLISEDRQREIIDPNCEG-VQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESE 913
            LAKL++ +++H+TT V GT G++APEY+ +G+++EKTDV+ +GV++LE+++G+R  D + +  +  + ++ W+  L+ E +   ++D + +G  + E ++ L+ VA  C  SSP +RP M  VV++LE +
Sbjct:  437 LAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGD 566          
BLAST of CV884945 vs. ExPASy Swiss-Prot
Match: RPK1_ARATH (Probable LRR receptor-like serine/threonine-protein kinase RPK1 OS=Arabidopsis thaliana GN=RPK1 PE=1 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 9.645e-22
Identity = 55/128 (42.97%), Postives = 82/128 (64.06%), Query Frame = -1
Query:  539 LAKLLEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFI--EKGLNIVGWLNFLISEDRQREIIDPNC-EGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQILE 913
            L+KLL   +SH+TT VAGTFGY+APEY  + R +EK DVYS+G+++LE++S KR  D SF   E G NIV W + ++S+ + +E+      E    + L  +L +A +C   S   RPTM + V++L+
Sbjct:  406 LSKLLGTSQSHVTTGVAGTFGYVAPEYAMTCRVSEKADVYSYGIVLLELISDKRALDPSFSSHENGFNIVSWAHMMLSQGKAKEVFTTGLWETGPPDDLVEVLHLALKCTVDSLSIRPTMKQAVRLLK 533          
BLAST of CV884945 vs. ExPASy Swiss-Prot
Match: SERK2_ARATH (Somatic embryogenesis receptor kinase 2 OS=Arabidopsis thaliana GN=SERK2 PE=1 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.149e-21
Identity = 46/130 (35.38%), Postives = 91/130 (70.00%), Query Frame = -1
Query:  533 LAKLLEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFI--EKGLNIVGWLNFLISEDRQREIIDPNCEGVQSES-LDALLAVATQCVSSSPDDRPTMHRVVQILESE 913
            LA+L++ +++H+TT V GT G++APEY+ +G+++EKTDV+ +G+++LE+++G+R  D + +  +  + ++ W+  L+ E +   ++DP+ +   +E+ ++ L+ VA  C  SSP +RP M  VV++LE +
Sbjct:  453 LARLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEMLVDPDLQSNYTEAEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGD 582          
BLAST of CV884945 vs. ExPASy Swiss-Prot
Match: Y1561_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g56130 OS=Arabidopsis thaliana GN=At1g56130 PE=1 SV=2)

HSP 1 Score: 102.834 bits (255), Expect = 2.806e-21
Identity = 54/128 (42.19%), Postives = 77/128 (60.16%), Query Frame = -1
Query:  530 LAKLLEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLISEDRQREIIDPNCEGVQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESEV 913
            LAKL +D+++HI+T VAGT GYLAPEY   G  TEKTDVY+FGV+ LE++SG+  +D +  E+   ++ W   L  + R  E+ID        E    ++ +A  C  +S   RP M RVV +L  +V
Sbjct:  839 LAKLYDDKKTHISTRVAGTIGYLAPEYAMRGHLTEKTDVYAFGVVALELVSGRPNSDENLEEEKKYLLEWAWNLHEKSRDIELIDDKLTDFNMEEAKRMIGIALLCTQTSHALRPPMSRVVAMLSGDV 966          
BLAST of CV884945 vs. ExPASy Swiss-Prot
Match: SERK1_ARATH (Somatic embryogenesis receptor kinase 1 OS=Arabidopsis thaliana GN=SERK1 PE=1 SV=2)

HSP 1 Score: 102.064 bits (253), Expect = 4.787e-21
Identity = 45/130 (34.62%), Postives = 88/130 (67.69%), Query Frame = -1
Query:  533 LAKLLEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFI--EKGLNIVGWLNFLISEDRQREIIDPNCE-GVQSESLDALLAVATQCVSSSPDDRPTMHRVVQILESE 913
            LAKL++ +++H+TT V GT G++APEY+ +G+++EKTDV+ +G+++LE+++G+R  D + +  +  + ++ W+  L+ E +   ++DP+ +   +   L+ ++ VA  C   SP +RP M  VV++LE +
Sbjct:  450 LAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEMLVDPDLQTNYEERELEQVIQVALLCTQGSPMERPKMSEVVRMLEGD 579          
The following BLAST results are available for this feature:
BLAST of CV884945 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 205
Match NameE-valueIdentityDescription
FEI1_ARATH4.721e-6988.73LRR receptor-like serine/threonine-protein kinase ... [more]
FEI2_ARATH3.996e-6888.73LRR receptor-like serine/threonine-protein kinase ... [more]
Y2296_ARATH2.453e-2546.09Probable receptor-like protein kinase At2g42960 OS... [more]
Y1154_ARATH3.204e-2542.97Probable serine/threonine-protein kinase At1g01540... [more]
EXS_ARATH1.139e-2245.67Leucine-rich repeat receptor protein kinase EXS OS... [more]
BAK1_ARATH7.385e-2236.92BRASSINOSTEROID INSENSITIVE 1-associated receptor ... [more]
RPK1_ARATH9.645e-2242.97Probable LRR receptor-like serine/threonine-protei... [more]
SERK2_ARATH2.149e-2135.38Somatic embryogenesis receptor kinase 2 OS=Arabido... [more]
Y1561_ARATH2.806e-2142.19Probable LRR receptor-like serine/threonine-protei... [more]
SERK1_ARATH4.787e-2134.62Somatic embryogenesis receptor kinase 1 OS=Arabido... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_011E08_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_011_T7_E08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884945 ID=CV884945; Name=CV884945; organism=Citrus sinensis; type=EST; length=913bp
ATTTTACAAAATGGCATAAATCAGACCATCTTTTTCAGAGGCCAAACTTT
TGAACTTATACAAATACATTTACAATTAATTAGAAAGAACAAATGCAAGA
GTGATTACAACTTTCAAGAAAAGAAAATGAAAAAAAAAATGAATAATTGA
GTCATACTGCAAGTGGAATTTCCAGATCACGTGGAGAGGAAAAAAACATC
TGCACCCACCCCATGCAGAATGAGGACACCAGAAGTAGGTAAATTAACCG
AGAATTCCATCAAGACTAATCAAATACTTGGAGAGGGGGTTCAAGCGGAT
AGCACGAAGCACTGCATCTTCATTTTTCATAAATCTGCACAAAGAATGAA
TAAATAAAATGGAGAAGCCGAACTGTTGCAGACTTTTAGTCACCTTTTCA
CTGCTGGCATCATCCAAAATATTCTACAAACTGCATTAACATGGATGCAA
ACTCAAATATGTCTTCATTGTCGCCGCAAAGTTTTCAATCTGAGTTGGAA
TCGTAAAAGTCACTTGGGCATGGGGTCATGACCTCAGATTCAAGAATCTG
GACCACTCTGTGCATGGTGGGTCGATCATCTGGGCTGGAAGATACACACT
GGGTGGCTACTGCAAGAAGGGCATCAAGACTTTCAGACTGAACCCCTTCA
CAATTTGGATCAATGATCTCTCGTTGCCTATCCTCCGATATTAGGAAATT
CAACCAACCAACAATATTGAGGCCTTTCTCAATAAAAGATGCATCAGTAG
GCCGCTTTCCACTTAAAACTTCAAGCACCAAGACCCCAAAGCTGTAAACA
TCAGTCTTTTCTGTAGCTCTACCACTTTGCATGTACTCTGGAGCCAAGTA
ACCAAATGTTCCTGCAACAATGGTTGTAATGTGAGATTCTTCATCTTCTA
AAAGTTTAGCAAG
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