CV884829

Overview
NameCV884829
Unique NameCV884829
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length808
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3368 contig Csv1_Contig3368:1..808. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CV884829 vs. ExPASy Swiss-Prot
Match: GPAT6_ARATH (Glycerol-3-phosphate acyltransferase 6 OS=Arabidopsis thaliana GN=GPAT6 PE=1 SV=1)

HSP 1 Score: 470.7 bits (1210), Expect = 4.215e-132
Identity = 228/269 (84.76%), Postives = 250/269 (92.94%), Query Frame = 1
Query:    1 LSPVIFHEGRLVQRPTPLVALLTFLWMPIGIILSILRVYTNIPLPERLAWYNYKLLGIKVVVKGTPPPAPKNGQSGVLFICNHRTVLDPVVTAVALGRKISCVTYSISKFTEIISPIKAVALSREREKDAAHIKQLLEEGDLVICPEGTTCREPFLLRFSALFAELTDRIVPVAINTKQTVFHGTTVRGHKLLDPYYVFMNPRPTYEITFLNQLPPELTVKGGKSAIEVANYIQRVLAGTLGFECTNLTRKDKYSILAGTDGRVPSKKE 807
            LSP+IFHEGRLVQRPTPLVALLTFLW+P+G +LSI+RVYTNIPLPER+A YNYKL GIK+VV G PPP PK GQ G L +CNHRTVLDPVVTAVALGRKISCVTYSISKF+E+ISPIKAVAL+R+REKDAA+IK+LLEEGDLVICPEGTTCREPFLLRFSALFAELTDRIVPVAINTKQ++F+GTT RG+KLLDPY+ FMNPRPTYEITFL Q+P ELT KGGKS IEVANYIQRVL GTLGFECTN TRKDKY++LAGTDGRVP KKE
Sbjct:  231 LSPIIFHEGRLVQRPTPLVALLTFLWLPVGFVLSIIRVYTNIPLPERIARYNYKLTGIKLVVNGHPPPPPKPGQPGHLLVCNHRTVLDPVVTAVALGRKISCVTYSISKFSELISPIKAVALTRQREKDAANIKRLLEEGDLVICPEGTTCREPFLLRFSALFAELTDRIVPVAINTKQSMFNGTTTRGYKLLDPYFAFMNPRPTYEITFLKQIPAELTCKGGKSPIEVANYIQRVLGGTLGFECTNFTRKDKYAMLAGTDGRVPVKKE 499          
BLAST of CV884829 vs. ExPASy Swiss-Prot
Match: GPAT4_ARATH (Glycerol-3-phosphate acyltransferase 4 OS=Arabidopsis thaliana GN=GPAT4 PE=1 SV=1)

HSP 1 Score: 367.081 bits (941), Expect = 6.563e-101
Identity = 171/264 (64.77%), Postives = 217/264 (82.20%), Query Frame = 1
Query:   10 VIFHEGRLVQRPTPLVALLTFLWMPIGIILSILRVYTNIPLPERLAWYNYKLLGIKVVVKGTPPPAPKNGQSGVLFICNHRTVLDPVVTAVALGRKISCVTYSISKFTEIISPIKAVALSREREKDAAHIKQLLEEGDLVICPEGTTCREPFLLRFSALFAELTDRIVPVAINTKQTVFHGTTVRGHKLLDPYYVFMNPRPTYEITFLNQLPPELTVK-GGKSAIEVANYIQRVLAGTLGFECTNLTRKDKYSILAGTDGRVPS 798
            +IFH+GRLVQRPTPL AL+ +LW+P G +LS+ RVY N+PLPER   Y Y++LGI + ++G  PP P  G+ G L++ NHRT LDP++ A+ALGRKI+CVTYS+S+ + ++SPI AVAL+R+R  DAA ++QLLE+GDLVICPEGTTCREP+LLRFSALFAEL+DRIVPVA+N KQ +F+GTTVRG K  DPY+ FMNPRP+YE TFL++LP E+TV  GGK+  EVANY+Q+V+ G LGFECT LTRKDKY +L G DG+V S
Sbjct:  232 IIFHDGRLVQRPTPLNALIIYLWLPFGFMLSVFRVYFNLPLPERFVRYTYEILGIHLTIRGHRPPPPSPGKPGNLYVLNHRTALDPIIIAIALGRKITCVTYSVSRLSLMLSPIPAVALTRDRVADAARMRQLLEKGDLVICPEGTTCREPYLLRFSALFAELSDRIVPVAMNCKQGMFNGTTVRGVKFWDPYFFFMNPRPSYEATFLDRLPEEMTVNGGGKTPFEVANYVQKVIGGVLGFECTELTRKDKYLLLGGNDGKVES 495          
BLAST of CV884829 vs. ExPASy Swiss-Prot
Match: GPAT8_ARATH (Probable glycerol-3-phosphate acyltransferase 8 OS=Arabidopsis thaliana GN=GPAT8 PE=2 SV=1)

HSP 1 Score: 362.844 bits (930), Expect = 1.238e-99
Identity = 169/264 (64.02%), Postives = 216/264 (81.82%), Query Frame = 1
Query:   10 VIFHEGRLVQRPTPLVALLTFLWMPIGIILSILRVYTNIPLPERLAWYNYKLLGIKVVVKGTPPPAPKNGQSGVLFICNHRTVLDPVVTAVALGRKISCVTYSISKFTEIISPIKAVALSREREKDAAHIKQLLEEGDLVICPEGTTCREPFLLRFSALFAELTDRIVPVAINTKQTVFHGTTVRGHKLLDPYYVFMNPRPTYEITFLNQLPPELTVK-GGKSAIEVANYIQRVLAGTLGFECTNLTRKDKYSILAGTDGRVPS 798
            ++FH+GRL QRPTPL A++T+LW+P G ILSI+RVY N+PLPER   Y Y++LGI + ++G  PP P  G  G L++ NHRT LDP++ A+ALGRKI CVTYS+S+ + ++SPI AVAL+R+R  DAA++++LLE+GDLVICPEGTTCRE +LLRFSALFAEL+DRIVPVA+N KQ +F+GTTVRG K  DPY+ FMNPRP+YE TFL++LP E+TV  GGK+ IEVANY+Q+V+   LGFECT LTRKDKY +L G DG+V S
Sbjct:  231 IVFHDGRLAQRPTPLNAIITYLWLPFGFILSIIRVYFNLPLPERFVRYTYEMLGIHLTIRGHRPPPPSPGTLGNLYVLNHRTALDPIIVAIALGRKICCVTYSVSRLSLMLSPIPAVALTRDRATDAANMRKLLEKGDLVICPEGTTCREEYLLRFSALFAELSDRIVPVAMNCKQGMFNGTTVRGVKFWDPYFFFMNPRPSYEATFLDRLPEEMTVNGGGKTPIEVANYVQKVIGAVLGFECTELTRKDKYLLLGGNDGKVES 494          
BLAST of CV884829 vs. ExPASy Swiss-Prot
Match: GPAT5_ARATH (Glycerol-3-phosphate acyltransferase 5 OS=Arabidopsis thaliana GN=GPAT5 PE=1 SV=1)

HSP 1 Score: 343.584 bits (880), Expect = 7.771e-94
Identity = 167/262 (63.74%), Postives = 199/262 (75.95%), Query Frame = 1
Query:    7 PVIFHEGRLVQRPTPLVALLTFLWMPIGIILSILRVYTNIPLPERLAWYNYKLLGIKVVVKGTPPPAPKNGQSGVLFICNHRTVLDPVVTAVALGRKISCVTYSISKFTEIISPIKAVALSREREKDAAHIKQLLEEGDLVICPEGTTCREPFLLRFSALFAELTDRIVPVAINTKQTVFHGTTVRGHKLLDPYYVFMNPRPTYEITFLNQLPPELTVKGGKSAIEVANYIQRVLAGTLGFECTNLTRKDKYSILAGTDGRV 792
            PVIFH+GRLV+RPTP  AL+  LW+P GIIL+++R++    LP     Y  ++ G  ++VKG PP  P  G+SGVLF+C HRT++DPVV +  LGR I  VTYSIS+ +EI+SPI  V L+R R+ DAA IKQ L +GDLV+CPEGTTCREPFLLRFSALFAELTDRIVPVA+N +   FH TT RG K LDP + FMNPRP YEITFLNQLP E T   GKS  +VANY+QR+LA TLGFECTN TRKDKY +LAG DG V
Sbjct:  220 PVIFHDGRLVKRPTPATALIILLWIPFGIILAVIRIFLGAVLPLWATPYVSQIFGGHIIVKGKPPQPPAAGKSGVLFVCTHRTLMDPVVLSYVLGRSIPAVTYSISRLSEILSPIPTVRLTRIRDVDAAKIKQQLSKGDLVVCPEGTTCREPFLLRFSALFAELTDRIVPVAMNYRVGFFHATTARGWKGLDPIFFFMNPRPVYEITFLNQLPMEATCSSGKSPHDVANYVQRILAATLGFECTNFTRKDKYRVLAGNDGTV 481          
BLAST of CV884829 vs. ExPASy Swiss-Prot
Match: GPAT7_ARATH (Glycerol-3-phosphate acyltransferase 7 OS=Arabidopsis thaliana GN=GPAT7 PE=1 SV=1)

HSP 1 Score: 318.931 bits (816), Expect = 2.050e-86
Identity = 156/262 (59.54%), Postives = 188/262 (71.76%), Query Frame = 1
Query:    7 PVIFHEGRLVQRPTPLVALLTFLWMPIGIILSILRVYTNIPLPERLAWYNYKLLGIKVVVKGTPPPAPKNGQSGVLFICNHRTVLDPVVTAVALGRKISCVTYSISKFTEIISPIKAVALSREREKDAAHIKQLLEEGDLVICPEGTTCREPFLLRFSALFAELTDRIVPVAINTKQTVFHGTTVRGHKLLDPYYVFMNPRPTYEITFLNQLPPELTVKGGKSAIEVANYIQRVLAGTLGFECTNLTRKDKYSILAGTDGRV 792
            PVIFH+GRLV+ PTP  AL+  LW+P GIIL+++R++    LP     Y  ++   + +VKG PP     G  GVLF+C HRT++DPVV +  LGR I  VTYSIS+ +EI+SPI    L+R R+ DA  IK+ L  GDLV+ PEGTTCREPFLLRFSALFAELTD IVPVA+N +   FH TT RG K LDP + FMNPRP YE+TFLNQL  E T   GKS  +VANY+QR+LA TLGFECTN TRKDKY +LAG DG V
Sbjct:  218 PVIFHDGRLVKLPTPATALIILLWIPFGIILAMIRIFVGFLLPLWAIPYVSRIFNTRFIVKGKPPAQATTGNPGVLFVCTHRTLMDPVVLSYVLGRSIPAVTYSISRLSEILSPIPTFRLTRIRDVDAEMIKKELSNGDLVVYPEGTTCREPFLLRFSALFAELTDNIVPVAMNYRVGFFHATTARGWKGLDPIFFFMNPRPVYEVTFLNQLEVEATCSSGKSPYDVANYVQRILAATLGFECTNFTRKDKYRVLAGNDGTV 479          
BLAST of CV884829 vs. ExPASy Swiss-Prot
Match: GPAT1_ARATH (Glycerol-3-phosphate acyltransferase 1 OS=Arabidopsis thaliana GN=GPAT1 PE=1 SV=1)

HSP 1 Score: 297.36 bits (760), Expect = 6.386e-80
Identity = 140/264 (53.03%), Postives = 192/264 (72.73%), Query Frame = 1
Query:    7 PVIFHEGRLVQRPTPLVALLTFLWMPIGIILSILRVYTNIPLPERLAWYNYKLLGIKVVVK--GTPPPAPKNGQSGVLFICNHRTVLDPVVTAVALGRKISCVTYSISKFTEIISPIKAVALSREREKDAAHIKQLLEEGDLVICPEGTTCREPFLLRFSALFAELTDRIVPVAINTKQTVFHGTTVRGHKLLDPYYVFMNPRPTYEITFLNQLPPELTVKGGKSAIEVANYIQRVLAGTLGFECTNLTRKDKYSILAGTDGRV 792
            P+IFH+GRL   PTPL  L  F+W+PIG +L++ R+   + LP  +A +   + G+++  K        P+ G SGVL++CNHRT+LDPV    +LG+ ++ VTYS+SKF+E I+P+K V+L R+R+KD   +++LL +GDLV+CPEGTTCREP+LLRFS LFAELT+ IVPVA++ + ++F+GTT  G K LDP +  MNPRP Y +  L +LP E+T  GGKS+ EVAN+IQ  LA  LGFECTNLTR+DKY +LAG +G V
Sbjct:  321 PLIFHDGRLAFLPTPLATLAMFIWLPIGFLLAVFRISVGVFLPYHVANFLASMSGVRITFKTHNLNNGRPEKGNSGVLYVCNHRTLLDPVFLTTSLGKPLTAVTYSLSKFSEFIAPLKTVSLKRDRKKDGEAMQRLLSKGDLVVCPEGTTCREPYLLRFSPLFAELTEDIVPVAVDARVSMFYGTTASGLKCLDPIFFLMNPRPVYCLEILKKLPKEMTCAGGKSSFEVANFIQGELARVLGFECTNLTRRDKYLVLAGNEGIV 584          
BLAST of CV884829 vs. ExPASy Swiss-Prot
Match: GPAT2_ARATH (Probable glycerol-3-phosphate acyltransferase 2 OS=Arabidopsis thaliana GN=GPAT2 PE=2 SV=1)

HSP 1 Score: 241.121 bits (614), Expect = 5.432e-63
Identity = 125/274 (45.62%), Postives = 178/274 (64.96%), Query Frame = 1
Query:    7 PVIFHEGRLVQRPTPLVALLTFLWMPIGIILSILRVYTNIPLPERLA--WYNYKLLGIKVVVKGTPPPAPKNGQSGVLFICNHRTVLDPVVTAVALGRK-ISCVTYSISKFTEIISPIKAVALSREREKDAAHIKQLLEEGDLVICPEGTTCREPFLLRFSALFAELTDRIVPVAINTKQTVFHGTTVRGHKLLDPYYVFMNPRPTYEITFLNQL--PPELTVKG----GKSAIEVANYIQRVLAGTLGFECTNLTRKDKYSILAGTDGRVPSK 801
            P+IFH+GRL  +PTPL  L+ F+W P   +L+  R+   + LP  LA  +  +  + + + V         + + G LF+CNHRT+LDP+  + AL +K +  VTYS+S+ +E+++PIK V L+R+R KD   +++LL +GDLV+CPEGTTCREP+LLRFS LF+E+ D IVPVAI++  T F+GTT  G K  DP +  +NP P+Y +  L+ +      T +G    GK   EVAN++Q  +   LGFECTNLTR+DKY ILAG +G V  K
Sbjct:  257 PLIFHDGRLAVKPTPLNTLVLFMWAPFAAVLAAARLVFGLNLPYSLANPFLAFSGIHLTLTVNNHNDLISADRKRGCLFVCNHRTLLDPLYISYALRKKNMKAVTYSLSRLSELLAPIKTVRLTRDRVKDGQAMEKLLSQGDLVVCPEGTTCREPYLLRFSPLFSEVCDVIVPVAIDSHVTFFYGTTASGLKAFDPIFFLLNPFPSYTVKLLDPVSGSSSSTCRGVPDNGKVNFEVANHVQHEIGNALGFECTNLTRRDKYLILAGNNGVVKKK 530          
BLAST of CV884829 vs. ExPASy Swiss-Prot
Match: GPAT3_ARATH (Probable glycerol-3-phosphate acyltransferase 3 OS=Arabidopsis thaliana GN=GPAT3 PE=2 SV=1)

HSP 1 Score: 230.72 bits (587), Expect = 7.341e-60
Identity = 124/267 (46.44%), Postives = 169/267 (63.30%), Query Frame = 1
Query:    7 PVIFHEGRLVQRPTPLVALLTFLWMPIGIILSILRVYTNIPLPERLAWYNYKLLGIKVVVKGTPPPAPKNGQS---GVLFICNHRTVLDPVVTAVALGRK-ISCVTYSISKFTEIISPIKAVALSREREKDAAHIKQLLEEGDLVICPEGTTCREPFLLRFSALFAELTDRIVPVAINTKQTVFHGTTVRGHKLLDPYYVFMNPRPTYEITFLNQLP-PELTVKGGKSAIEVANYIQRVLAGTLGFECTNLTRKDKYSILAGTDGRV 792
            P+IFH+GRL  +PT +  L+ F+W P     +  R++ ++ +P  L+       G ++ V      + K   S   G LF+CNHRT+LDP+  A AL +K I  VTYS+S+ +EI++PIK V L+R+R  D   +++LL EGDLV+CPEGTTCREP+LLRFS LF E++D IVPVA+    T F+GTT  G K LDP +  ++P PTY I FL+ +         GK   EVAN +Q  +   L FECT+LTRKDKY ILAG +G V
Sbjct:  251 PLIFHDGRLAIKPTLMNTLVLFMWGPFAAAAAAARLFVSLCIPYSLSIPILAFSGCRLTVTNDYVSSQKQKPSQRKGCLFVCNHRTLLDPLYVAFALRKKNIKTVTYSLSRVSEILAPIKTVRLTRDRVSDGQAMEKLLTEGDLVVCPEGTTCREPYLLRFSPLFTEVSDVIVPVAVTVHVTFFYGTTASGLKALDPLFFLLDPYPTYTIQFLDPVSGATCQDPDGKLKFEVANNVQSDIGKALDFECTSLTRKDKYLILAGNNGVV 517          
The following BLAST results are available for this feature:
BLAST of CV884829 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 8
Match NameE-valueIdentityDescription
GPAT6_ARATH4.215e-13284.76Glycerol-3-phosphate acyltransferase 6 OS=Arabidop... [more]
GPAT4_ARATH6.563e-10164.77Glycerol-3-phosphate acyltransferase 4 OS=Arabidop... [more]
GPAT8_ARATH1.238e-9964.02Probable glycerol-3-phosphate acyltransferase 8 OS... [more]
GPAT5_ARATH7.771e-9463.74Glycerol-3-phosphate acyltransferase 5 OS=Arabidop... [more]
GPAT7_ARATH2.050e-8659.54Glycerol-3-phosphate acyltransferase 7 OS=Arabidop... [more]
GPAT1_ARATH6.386e-8053.03Glycerol-3-phosphate acyltransferase 1 OS=Arabidop... [more]
GPAT2_ARATH5.432e-6345.62Probable glycerol-3-phosphate acyltransferase 2 OS... [more]
GPAT3_ARATH7.341e-6046.44Probable glycerol-3-phosphate acyltransferase 3 OS... [more]
back to top
Properties
Property NameValue
Genbank descriptionUCRCS04_2_010H03_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_010_T3_H03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884829 ID=CV884829; Name=CV884829; organism=Citrus sinensis; type=EST; length=808bp
CTAAGCCCAGTGATATTTCACGAGGGTCGTTTAGTTCAAAGACCAACTCC
ACTTGTTGCTCTTCTGACCTTCCTTTGGATGCCAATTGGTATCATATTAT
CAATTCTCAGAGTCTATACAAACATCCCTTTGCCGGAACGATTGGCTTGG
TACAATTACAAGCTTTTGGGCATCAAGGTTGTCGTTAAGGGTACCCCACC
ACCAGCACCCAAAAATGGCCAAAGTGGTGTCCTTTTTATATGCAACCATC
GCACTGTTTTAGACCCTGTGGTCACAGCCGTTGCCCTAGGACGAAAAATT
AGTTGTGTCACATATAGTATTAGCAAGTTCACTGAAATAATTTCACCCAT
TAAAGCTGTTGCCTTGTCAAGGGAAAGAGAGAAAGATGCAGCTCACATCA
AGCAATTGCTTGAAGAAGGTGACTTGGTGATCTGCCCCGAGGGAACAACC
TGCAGGGAGCCTTTTCTTTTACGATTCAGTGCACTTTTTGCTGAGCTTAC
AGATAGAATTGTGCCGGTTGCTATCAACACTAAGCAAACTGTGTTTCATG
GTACCACAGTACGTGGGCACAAATTGTTGGATCCTTACTATGTGTTCATG
AATCCAAGGCCAACTTATGAGATCACATTCTTGAATCAGCTGCCGCCGGA
GCTGACAGTGAAAGGCGGCAAATCAGCCATCGAAGTTGCTAATTACATTC
AAAGGGTGCTTGCTGGTACATTAGGGTTTGAGTGCACCAATTTGACGAGG
AAAGATAAGTACTCCATTCTCGCAGGTACTGATGGCCGCGTTCCATCGAA
GAAGGAAA
back to top