CV884721

Overview
NameCV884721
Unique NameCV884721
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length776
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12928 contig Csv1_Contig12928:1439..2214. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of CV884721 vs. ExPASy Swiss-Prot
Match: SUBL_ARATH (Subtilisin-like protease OS=Arabidopsis thaliana GN=ARA12 PE=1 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.217e-16
Identity = 66/163 (40.49%), Postives = 85/163 (52.15%), Query Frame = -1 
Query:  300 ATPFDYGNGHVNPRAALDPGLIFDAGYVDYLGFLC----TTPGIDIHEIRNYTNQPC-NYSMGHPYNFNTPSITV-AHLVKTQVVTRTVTNVAEEETYSMSARMQ-PAIAIEVNPPAMTLKPGASRK-FTVTLTVRS--VTGTYSFGEICMKGSRGHKVNIPV 758
            +TPFD+G GHV+P  A +PGLI+D    DYLGFLC    T+P I     RNYT  P  +YS+    + N PS  V    V     TRTVT+V    TYS+    +   + I V P  +  K    +K +TVT TV S   +G+ SFG I     + H V  PV
Sbjct:  594 STPFDHGAGHVSPTTATNPGLIYDLTTEDYLGFLCALNYTSPQIRSVSRRNYTCDPSKSYSVA---DLNYPSFAVNVDGVGAYKYTRTVTSVGGAGTYSVKVTSETTGVKISVEPAVLNFKEANEKKSYTVTFTVDSSKPSGSNSFGSIEWSDGK-HVVGSPV 752
The following BLAST results are available for this feature:
BLAST of CV884721 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
SUBL_ARATH1.217e-1640.49Subtilisin-like protease OS=Arabidopsis thaliana G... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS04_2_010B10_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_010_T7_B10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884721 ID=CV884721; Name=CV884721; organism=Citrus sinensis; type=EST; length=776bp
TTTTTTTTTTTTTTTTAAGAAACCTTTTCTCATAAATCATAAAAGGGGAA
TTAAGAAGCAATTTATCTCGAATTACTAGACTAATAAGCAAAACTTATGA
ATGGAAGAAACTAGGCGTCTCCCCCTTGTACTTGTTATCTTTACAACTAC
TCCACATATATATTTGAGACCATATATATTTGGCCTTATAGCTATCTTAT
TACCACAGATTACAAAAGAATATTACAACGATACAACTTAACTAACATTG
ACCCCAACGCATCTCATCAGTCAATTCATCGCCAATTTCCCTGAGCTATC
ACCGGGATATTTACCTTGTGCCCTCGACTTCCTTTCATGCAAATTTCCCC
AAAACTGTACGTGCCGGTCACCGATCTCACAGTGAGGGTCACAGTGAACT
TCCGTGAAGCACCAGGTTTCAAAGTCATGGCTGGAGGGTTGACTTCAATG
GCAATGGCTGGTTGCATCCTGGCGGACATCGAGTAGGTTTCTTCTTCGGC
AACATTTGTGACTGTTCGTGTAACTACTTGAGTCTTCACAAGATGGGCGA
CTGTGATTGACGGAGTATTGAAATTATACGGGTGGCCCATTGAGTAGTTG
CAGGGTTGGTTTGTGTAGTTTCTTATCTCGTGAATGTCTATGCCGGGAGT
CGTGCACAAGAATCCCAAGTAATCCACGTAACCTGCATCAAATATGAGTC
CAGGATCCAAGGCAGCTCTTGGATTGACATGGCCATTCCCATAGTCAAAT
GGTGTAGCTGTAACCAGCTTCATGGC
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