CV884711
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV884711 vs. ExPASy Swiss-Prot
Match: CCA32_ARATH (Cyclin-A3-2 OS=Arabidopsis thaliana GN=CYCA3-2 PE=2 SV=1) HSP 1 Score: 267.7 bits (683), Expect = 5.349e-71 Identity = 126/165 (76.36%), Postives = 150/165 (90.91%), Query Frame = 1 Query: 307 DIDARSDDPQICGAYVTDIYQYLHSMEVDPKRRPLPDYVEKVQKDVSANMRGVLVDWLVEVAEEYKLVSDTLYLTISYIDRFLSLNVLNRQKLQLLGVSSMLIASKYEEISPPNVEDFCYITDNTYTKDEVVKMEADILKSLKFELGSPTVKTFLRRLTRVAQED 801 DID+RSDDPQ+CG YV DIY+YL +EV PK+RPLPDY+EKVQKDV+ +MRGVLVDWLVEVAEEYKL S+TLYLT+S+IDRFLSL +N+QKLQL+GVS+MLIASKYEEISPP V+DFCYITDNT++K +VVKMEADIL +L+FELG PT+ TF+RR TRVAQ+D Sbjct: 88 DIDSRSDDPQMCGPYVADIYEYLRQLEVKPKQRPLPDYIEKVQKDVTPSMRGVLVDWLVEVAEEYKLGSETLYLTVSHIDRFLSLKTVNKQKLQLVGVSAMLIASKYEEISPPKVDDFCYITDNTFSKQDVVKMEADILLALQFELGRPTINTFMRRFTRVAQDD 252
BLAST of CV884711 vs. ExPASy Swiss-Prot
Match: CCA31_ARATH (Putative cyclin-A3-1 OS=Arabidopsis thaliana GN=CYCA3-1 PE=3 SV=1) HSP 1 Score: 265.003 bits (676), Expect = 3.467e-70 Identity = 128/165 (77.58%), Postives = 148/165 (89.70%), Query Frame = 1 Query: 307 DIDARSDDPQICGAYVTDIYQYLHSMEVDPKRRPLPDYVEKVQKDVSANMRGVLVDWLVEVAEEYKLVSDTLYLTISYIDRFLSLNVLNRQKLQLLGVSSMLIASKYEEISPPNVEDFCYITDNTYTKDEVVKMEADILKSLKFELGSPTVKTFLRRLTRVAQED 801 DID RSDDPQ+CG YVT I++YL +EV K RPL DY+EK+QKDV++NMRGVLVDWLVEVAEEYKL+SDTLYL +SYIDRFLSL +N+Q+LQLLGV+SMLIASKYEEI+PPNV+DFCYITDNTYTK E+VKMEADIL +L+FELG+PT TFLRR TRVAQED Sbjct: 73 DIDTRSDDPQMCGPYVTSIFEYLRQLEV--KSRPLVDYIEKIQKDVTSNMRGVLVDWLVEVAEEYKLLSDTLYLAVSYIDRFLSLKTVNKQRLQLLGVTSMLIASKYEEITPPNVDDFCYITDNTYTKQEIVKMEADILLALQFELGNPTSNTFLRRFTRVAQED 235
BLAST of CV884711 vs. ExPASy Swiss-Prot
Match: CCA34_ARATH (Cyclin-A3-4 OS=Arabidopsis thaliana GN=CYCA3-4 PE=1 SV=1) HSP 1 Score: 253.447 bits (646), Expect = 1.044e-66 Identity = 140/253 (55.34%), Postives = 163/253 (64.43%), Query Frame = 1 Query: 46 MADQENFVRVTXXXXXXXXXXXXXLEQPAKKKRVVLGEXXXXXXXXXXXXXXXKAEPRXXXXXXXXXXXXXXXXXXXXXXXXXYADIDIDARSDDPQICGAYVTDIYQYLHSMEVDPKRRPLPDYVEKVQKDVSANMRGVLVDWLVEVAEEYKLVSDTLYLTISYIDRFLSLNVLNRQKLQLLGVSSMLIAS-KYEEISPPNVEDFCYITDNTYTKDEVVKMEADILKSLKFELGSPTVKTFLRRLTRVAQED 801 MA+ +N R+T E P KKRVVLGE + A + I++RS DPQ+C + +DI YL ME PK RPLPDY+EKVQ D++ +MR VLVDWLVEVAEEYKLVSDTLYLTISY+DRFLS+ +NRQKLQL+GVS+MLIAS KYEEI PP VEDFCYITDNT+TK EVV MEADIL +L+FELGSPT+KTFLRR TRVAQED Sbjct: 1 MAENQNCARMTRAAAKRKASSMALDENPVSKKRVVLGELPNMSNVVAVPNQERET-------LKAKTSVNTSKRQMKKALMIPEASVLIESRSVDPQMCEPFASDICAYLREMEGKPKHRPLPDYIEKVQSDLTPHMRAVLVDWLVEVAEEYKLVSDTLYLTISYVDRFLSVKPINRQKLQLVGVSAMLIASRKYEEIGPPKVEDFCYITDNTFTKQEVVSMEADILLALQFELGSPTIKTFLRRFTRVAQED 246
BLAST of CV884711 vs. ExPASy Swiss-Prot
Match: CCA31_ORYSJ (Cyclin-A3-1 OS=Oryza sativa subsp. japonica GN=CYCA3-1 PE=3 SV=1) HSP 1 Score: 248.825 bits (634), Expect = 2.571e-65 Identity = 123/165 (74.55%), Postives = 135/165 (81.82%), Query Frame = 1 Query: 307 DIDARSDDPQICGAYVTDIYQYLHSMEVDPKRRPLPDYVEKVQKDVSANMRGVLVDWLVEVAEEYKLVSDTLYLTISYIDRFLSLNVLNRQKLQLLGVSSMLIASKYEEISPPNVEDFCYITDNTYTKDEVVKMEADILKSLKFELGSPTVKTFLRRLTRVAQED 801 D + DPQ+C Y +DI YL SMEV KRRP DY+E VQ DV+ANMRG+LVDWLVEVAEEYKLVSDTLYLT+SYIDRFLS +NRQKLQLLGVS+MLIASKYEEISPPNVEDFCYITDNTY K EVVKME DIL LKFE+G+PT KTFLR R +QED Sbjct: 89 DDEEGEGDPQLCAPYASDINSYLRSMEVQAKRRPAADYIETVQVDVTANMRGILVDWLVEVAEEYKLVSDTLYLTVSYIDRFLSAKSINRQKLQLLGVSAMLIASKYEEISPPNVEDFCYITDNTYMKQEVVKMERDILNVLKFEMGNPTTKTFLRMFIRSSQED 253
BLAST of CV884711 vs. ExPASy Swiss-Prot
Match: CCA33_ARATH (Cyclin-A3-3 OS=Arabidopsis thaliana GN=CYCA3-3 PE=2 SV=2) HSP 1 Score: 243.047 bits (619), Expect = 1.411e-63 Identity = 117/165 (70.91%), Postives = 139/165 (84.24%), Query Frame = 1 Query: 307 DIDARSDDPQICGAYVTDIYQYLHSMEVDPKRRPLPDYVEKVQKDVSANMRGVLVDWLVEVAEEYKLVSDTLYLTISYIDRFLSLNVLNRQKLQLLGVSSMLIASKYEEISPPNVEDFCYITDNTYTKDEVVKMEADILKSLKFELGSPTVKTFLRRLTRVAQED 801 DIDARSDDPQ+CG YV+DIY+YL +EV PK RPL DY+EK+Q+D++ + RGVLVDWLVEVAEE++LVS+TLYLT+SYIDRFLSL ++N LQL+GVS+M IASKYEE P VEDFCYIT NTYTK +V+KME DIL +L+FELG PT TFLRR RVAQED Sbjct: 42 DIDARSDDPQMCGLYVSDIYEYLRELEVKPKLRPLHDYIEKIQEDITPSKRGVLVDWLVEVAEEFELVSETLYLTVSYIDRFLSLKMVNEHWLQLVGVSAMFIASKYEEKRRPKVEDFCYITANTYTKQDVLKMEEDILLALEFELGRPTTNTFLRRFIRVAQED 206
BLAST of CV884711 vs. ExPASy Swiss-Prot
Match: CCNAL_DAUCA (G2/mitotic-specific cyclin C13-1 (Fragment) OS=Daucus carota PE=2 SV=1) HSP 1 Score: 236.113 bits (601), Expect = 1.725e-61 Identity = 115/166 (69.28%), Postives = 141/166 (84.94%), Query Frame = 1 Query: 304 IDIDARSDDPQICGAYVTDIYQYLHSMEVDPKRRPLPDYVEKVQKDVSANMRGVLVDWLVEVAEEYKLVSDTLYLTISYIDRFLSLNVLNRQKLQLLGVSSMLIASKYEEISPPNVEDFCYITDNTYTKDEVVKMEADILKSLKFELGSPTVKTFLRRLTRVAQED 801 +D + DDPQ+C AYV+D+Y+YL ME++ KRRP+ +Y+E+VQKDV++NMRGVLVDWLVEV+ EYKL+ +TLYL ISY+DR+LS+NVLNRQKLQLLGVSS LIASKYEEI P NV DF ITDNTY++ EVVKMEAD+LK+LKFE+GSPTVKTFL R QE+ Sbjct: 59 VDFGEKFDDPQMCSAYVSDVYEYLKQMEMETKRRPMMNYIEQVQKDVTSNMRGVLVDWLVEVSLEYKLLPETLYLAISYVDRYLSVNVLNRQKLQLLGVSSFLIASKYEEIKPKNVADFVDITDNTYSQQEVVKMEADLLKTLKFEMGSPTVKTFL-GFIRAVQEN 223
BLAST of CV884711 vs. ExPASy Swiss-Prot
Match: CCA32_ORYSJ (Cyclin-A3-2 OS=Oryza sativa subsp. japonica GN=CYCA3-2 PE=2 SV=1) HSP 1 Score: 227.254 bits (578), Expect = 8.011e-59 Identity = 110/158 (69.62%), Postives = 133/158 (84.18%), Query Frame = 1 Query: 328 DPQICGAYVTDIYQYLHSMEVDPKRRPLPDYVEKVQKDVSANMRGVLVDWLVEVAEEYKLVSDTLYLTISYIDRFLSLNVLNRQKLQLLGVSSMLIASKYEEISPPNVEDFCYITDNTYTKDEVVKMEADILKSLKFELGSPTVKTFLRRLTRVAQED 801 DPQ Y +DIY YL SMEV+ +R+ DY+E VQ DV+ANMR +LVDWLVEVA+EYKLV+DTLYL +SY+DR+LS + L R +LQLLGV +MLIA+KYEEISPP+VEDFCYITDNTYT+ EVVKME+DILK L+FE+G+PT+KTFLRR TR QED Sbjct: 112 DPQ----YASDIYTYLRSMEVEARRQSAADYIEAVQVDVTANMRAILVDWLVEVADEYKLVADTLYLAVSYLDRYLSAHPLRRNRLQLLGVGAMLIAAKYEEISPPHVEDFCYITDNTYTRQEVVKMESDILKLLEFEMGNPTIKTFLRRFTRSCQED 265
BLAST of CV884711 vs. ExPASy Swiss-Prot
Match: CCA11_ARATH (Cyclin-A1-1 OS=Arabidopsis thaliana GN=CYCA1-1 PE=1 SV=1) HSP 1 Score: 214.542 bits (545), Expect = 5.373e-55 Identity = 100/163 (61.35%), Postives = 134/163 (82.21%), Query Frame = 1 Query: 304 IDIDARSDDPQICGAYVTDIYQYLHSMEVDPKRRPLPDYVEKVQKDVSANMRGVLVDWLVEVAEEYKLVSDTLYLTISYIDRFLSLNVLNRQKLQLLGVSSMLIASKYEEISPPNVEDFCYITDNTYTKDEVVKMEADILKSLKFELGSPTVKTFLRRLTRVA 792 ++ID+ + DPQ+C + DIY++L + E K+RP DY+E+VQKDV+++MRG+LVDWL+EV+EEY+LV +TLYLT++YIDR+LS NV++RQKLQLLGV+ M+IA+KYEEI P VE+FCYITDNTY KDEV+ ME+D+L LKFE+ +PT K FLRR R A Sbjct: 179 VNIDSNNGDPQLCATFACDIYKHLRASEA--KKRPDVDYMERVQKDVNSSMRGILVDWLIEVSEEYRLVPETLYLTVNYIDRYLSGNVISRQKLQLLGVACMMIAAKYEEICAPQVEEFCYITDNTYLKDEVLDMESDVLNYLKFEMTAPTTKCFLRRFVRAA 339
BLAST of CV884711 vs. ExPASy Swiss-Prot
Match: CCA14_ORYSJ (Cyclin-A1-4 OS=Oryza sativa subsp. japonica GN=CYCA1-4 PE=2 SV=2) HSP 1 Score: 211.46 bits (537), Expect = 4.549e-54 Identity = 100/164 (60.98%), Postives = 128/164 (78.05%), Query Frame = 1 Query: 304 IDIDARSDDPQICGAYVTDIYQYLHSMEVDPKRRPLPDYVEKVQKDVSANMRGVLVDWLVEVAEEYKLVSDTLYLTISYIDRFLSLNVLNRQKLQLLGVSSMLIASKYEEISPPNVEDFCYITDNTYTKDEVVKMEADILKSLKFELGSPTVKTFLRRLTRVAQ 795 +DID +DPQ+C DIY++L E K+RP D+VE +QK++ +MR VL+DWLVEV EEY+LV +TLYLT++YIDR+LS V+NR+K+QLLGV+ +LIASKYEEI PP VE+ CYI+DNTYTKDEV+KMEA +LK LKFE+ +PT K FLRR R AQ Sbjct: 69 VDIDNNHEDPQLCATLAFDIYKHLRVAET--KKRPSTDFVETIQKNIDTSMRAVLIDWLVEVTEEYRLVPETLYLTVNYIDRYLSSKVINRRKMQLLGVACLLIASKYEEICPPQVEELCYISDNTYTKDEVLKMEASVLKYLKFEMTAPTTKCFLRRFLRAAQ 230
BLAST of CV884711 vs. ExPASy Swiss-Prot
Match: CCA12_ORYSJ (Cyclin-A1-2 OS=Oryza sativa subsp. japonica GN=CYCA1-2 PE=3 SV=2) HSP 1 Score: 210.305 bits (534), Expect = 1.013e-53 Identity = 99/163 (60.74%), Postives = 129/163 (79.14%), Query Frame = 1 Query: 307 DIDARSDDPQICGAYVTDIYQYLHSMEVDPKRRPLPDYVEKVQKDVSANMRGVLVDWLVEVAEEYKLVSDTLYLTISYIDRFLSLNVLNRQKLQLLGVSSMLIASKYEEISPPNVEDFCYITDNTYTKDEVVKMEADILKSLKFELGSPTVKTFLRRLTRVAQ 795 D+D +DPQ+C +DIY +H E + ++RP D++E +QKDV+ +MR +L+DWLVEVAEEY+LV DTLYLT++YIDR+LS N +NRQ+LQLLGV+ MLIA+KYEEI P VE+FCYITDNTY +DEV++MEA +L LKFE+ +PT K FLRR RVAQ Sbjct: 196 DVDNNYEDPQLCATLASDIY--MHLREAETRKRPSTDFMETIQKDVNPSMRAILIDWLVEVAEEYRLVPDTLYLTVNYIDRYLSGNEINRQRLQLLGVACMLIAAKYEEICAPQVEEFCYITDNTYFRDEVLEMEASVLNYLKFEVTAPTAKCFLRRFVRVAQ 356 The following BLAST results are available for this feature:
BLAST of CV884711 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 164
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Sequences
The
following sequences are available for this feature:
EST sequence >CV884711 ID=CV884711; Name=CV884711; organism=Citrus sinensis; type=EST; length=801bpback to top |