EY665309
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY665309 vs. ExPASy Swiss-Prot
Match: SSG1_MANES (Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Manihot esculenta GN=WAXY PE=2 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 1.516e-21 Identity = 45/105 (42.86%), Postives = 61/105 (58.10%), Query Frame = 3 Query: 126 MATAVAASSFVSRSYGHEVASGLNSKASQMKF-----RCMKHSGLRSLNIIDELQVKTMASKLATSRQAGRNGFRSQNGPSLMIVCGVGLNILFVGTEVAPWNKT 425 MAT +AA FVSRS H L +KA+ + + + +GLRSLN +D+LQ+KT SK A NG P+ I+CG G+N++FVG EV PW+KT Sbjct: 1 MATVIAAH-FVSRS-SHLSIHALETKANNLSHTGPWTQTITPNGLRSLNTMDKLQMKTQ-SKAVKKVSATGNG-----RPAAKIICGHGMNLIFVGAEVGPWSKT 97 HSP 2 Score: 57.3806 bits (137), Expect = 1.516e-21 Identity = 22/35 (62.86%), Postives = 31/35 (88.57%), Query Frame = 1 Query: 469 AAYGHRVMTIAPRYDRNKDAWETDVEIDLKVGDKI 573 AA GHRVMT++PRYD+ KDAW+T V +++K+GD+I Sbjct: 112 AARGHRVMTVSPRYDQYKDAWDTSVSVEIKIGDRI 146
BLAST of EY665309 vs. ExPASy Swiss-Prot
Match: SSG1_SOLTU (Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Solanum tuberosum GN=WAXY PE=1 SV=1) HSP 1 Score: 65.855 bits (159), Expect = 5.647e-21 Identity = 42/102 (41.18%), Postives = 60/102 (58.82%), Query Frame = 3 Query: 126 MATAVAASSFVSRSYGHEVASGLNSKASQMKFR--CMKHSGLRSLNIIDELQVKTMASKLATSRQAGRNGFRSQNGPSLMIVCGVGLNILFVGTEVAPWNKT 425 MA+ A+ FVSRS + + S SQ+ R + H+GLR++N +D LQ +T T + A R + + G S IVCG G+N++FVGTEV PW+KT Sbjct: 1 MASITASHHFVSRS---QTSLDTKSTLSQIGLRNHTLTHNGLRAVNKLDGLQSRTNTK--VTPKMASRTETK-RPGCSATIVCGKGMNLIFVGTEVGPWSKT 96 HSP 2 Score: 56.6102 bits (135), Expect = 5.647e-21 Identity = 24/35 (68.57%), Postives = 30/35 (85.71%), Query Frame = 1 Query: 469 AAYGHRVMTIAPRYDRNKDAWETDVEIDLKVGDKI 573 AA GHRVMTI+PRYD+ KDAW+T V +++KVGD I Sbjct: 111 AARGHRVMTISPRYDQYKDAWDTSVAVEVKVGDSI 145
BLAST of EY665309 vs. ExPASy Swiss-Prot
Match: SSG1_ARATH (Probable granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Arabidopsis thaliana GN=WAXY PE=2 SV=1) HSP 1 Score: 62.3882 bits (150), Expect = 1.017e-19 Identity = 38/103 (36.89%), Postives = 62/103 (60.19%), Query Frame = 3 Query: 126 MATAVAASSFVSRS--YGHEVASGLNSKAS-QMKFRCMKHSGLRSLNIIDELQVKTMASKLATSRQAGRNGFRSQNGPSLMIVCGVGLNILFVGTEVAPWNKT 425 MAT A+S+FVSR+ + + AS + A +K + + H GLRS N++D LQ ++ A K +++ + R+ G IVC G++++F+G EV PW+KT Sbjct: 1 MATVTASSNFVSRTSLFNNHGASSCSDVAQITLKGQSLTHCGLRSFNMVDNLQRRSQA-KPVSAKSSKRSSKVKTAGK---IVCEKGMSVIFIGAEVGPWSKT 99 HSP 2 Score: 55.8398 bits (133), Expect = 1.017e-19 Identity = 24/35 (68.57%), Postives = 29/35 (82.86%), Query Frame = 1 Query: 469 AAYGHRVMTIAPRYDRNKDAWETDVEIDLKVGDKI 573 AA GHRVMTI PRYD+ KDAW+T V + +KVGDK+ Sbjct: 114 AARGHRVMTICPRYDQYKDAWDTCVVVQIKVGDKV 148
BLAST of EY665309 vs. ExPASy Swiss-Prot
Match: SSG1_ANTMA (Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Antirrhinum majus GN=WAXY PE=2 SV=1) HSP 1 Score: 58.9214 bits (141), Expect = 1.407e-18 Identity = 38/103 (36.89%), Postives = 59/103 (57.28%), Query Frame = 3 Query: 126 MATAVAASSFVSRSYGHEVAS-GLNSKASQMKFRCMK--HSGLRSLNIIDELQVKTMASKLATSRQAGRNGFRSQNGPSLMIVCGVGLNILFVGTEVAPWNKT 425 MAT V AS VS +G +S + +Q+ R + H+GLRS+N++D+LQ++ A + + + NG P I+CG G+N++FV EV PW+KT Sbjct: 1 MAT-VTASQLVSHVHGGATSSPDTKTNLAQVGLRNQQFTHNGLRSINMVDKLQMRNNAKQSRSLVKKTDNG-----SPLGKIICGTGMNLVFVLAEVGPWSKT 97 HSP 2 Score: 55.4546 bits (132), Expect = 1.407e-18 Identity = 27/50 (54.00%), Postives = 35/50 (70.00%), Query Frame = 1 Query: 424 LGDLVKFLEVCHQHWAAYGHRVMTIAPRYDRNKDAWETDVEIDLKVGDKI 573 LGD+V L A GHRVMT++PRYD+ KDAW+T V +++KVGD I Sbjct: 100 LGDVVGGLPPA---MAGNGHRVMTVSPRYDQYKDAWDTSVVVEIKVGDSI 146
BLAST of EY665309 vs. ExPASy Swiss-Prot
Match: SSG1_IPOBA (Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Ipomoea batatas GN=WAXY PE=2 SV=2) HSP 1 Score: 54.6842 bits (130), Expect = 5.546e-17 Identity = 23/35 (65.71%), Postives = 30/35 (85.71%), Query Frame = 1 Query: 469 AAYGHRVMTIAPRYDRNKDAWETDVEIDLKVGDKI 573 AA GHRVMT+ PRYD+ KDAW+T V ++L+VGD+I Sbjct: 112 AARGHRVMTVCPRYDQYKDAWDTCVVVELQVGDRI 146 HSP 2 Score: 54.299 bits (129), Expect = 5.546e-17 Identity = 40/104 (38.46%), Postives = 55/104 (52.88%), Query Frame = 3 Query: 126 MATAVAASSFVSRSYGHEVASGLNSKASQMKFR--CMKHSGLRSLNIIDELQVKTMASKLATSRQAGRNGFRSQNGPSL-MIVCGV-GLNILFVGTEVAPWNKT 425 MAT + AS FVS G + Q+ R + H+GLR +N ID LQ++T A K +NG ++ G + IVC G+N++FVG EV PW KT Sbjct: 1 MAT-ITASHFVSHVCGGATSGESKVGLGQLALRSQAVTHNGLRPVNKIDMLQLRTSAKK------PSKNGRENEGGMAAGTIVCKQQGMNLVFVGCEVGPWCKT 97
BLAST of EY665309 vs. ExPASy Swiss-Prot
Match: SSG1_SORBI (Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Sorghum bicolor GN=WAXY PE=2 SV=1) HSP 1 Score: 49.6766 bits (117), Expect = 5.036e-14 Identity = 20/33 (60.61%), Postives = 27/33 (81.82%), Query Frame = 1 Query: 469 AAYGHRVMTIAPRYDRNKDAWETDVEIDLKVGD 567 AA GHRVM ++PRYD+ KDAW+T V ++K+GD Sbjct: 112 AANGHRVMVVSPRYDQYKDAWDTSVVSEIKMGD 144 HSP 2 Score: 49.2914 bits (116), Expect = 5.036e-14 Identity = 22/54 (40.74%), Postives = 32/54 (59.26%), Query Frame = 3 Query: 264 DELQVKTMASKLATSRQAGRNGFRSQNGPSLMIVCGVGLNILFVGTEVAPWNKT 425 D L ++T A + A R G R PSL++ G+N++FVG E+APW+KT Sbjct: 44 DALSMRTSACPAPRQQPAARRGGRGGRFPSLVVCATAGMNVVFVGAEMAPWSKT 97
BLAST of EY665309 vs. ExPASy Swiss-Prot
Match: SSG1_MAIZE (Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Zea mays GN=WAXY PE=3 SV=1) HSP 1 Score: 49.6766 bits (117), Expect = 1.434e-13 Identity = 20/33 (60.61%), Postives = 27/33 (81.82%), Query Frame = 1 Query: 469 AAYGHRVMTIAPRYDRNKDAWETDVEIDLKVGD 567 AA GHRVM ++PRYD+ KDAW+T V ++K+GD Sbjct: 107 AANGHRVMVVSPRYDQYKDAWDTSVVSEIKMGD 139 HSP 2 Score: 47.7506 bits (112), Expect = 1.434e-13 Identity = 24/62 (38.71%), Postives = 35/62 (56.45%), Query Frame = 3 Query: 240 GLRSLNIIDELQVKTMASKLATSRQAGRNGFRSQNGPSLMIVCGVGLNILFVGTEVAPWNKT 425 G R+ D L ++T A +Q R G R PSL++ G+N++FVG E+APW+KT Sbjct: 34 GARASAAADTLSMRTSARAAPRHQQQARRGGRF---PSLVVCASAGMNVVFVGAEMAPWSKT 92
BLAST of EY665309 vs. ExPASy Swiss-Prot
Match: SSG1B_HORVU (Granule-bound starch synthase 1b, chloroplastic/amyloplastic (Fragment) OS=Hordeum vulgare PE=1 SV=1) HSP 1 Score: 52.7582 bits (125), Expect = 5.574e-12 Identity = 27/49 (55.10%), Postives = 35/49 (71.43%), Query Frame = 1 Query: 424 LGDLVKFLEVCHQHWAAYGHRVMTIAPRYDRNKDAWETDVEIDLKVGDK 570 LGD+V L AA GHRVMTIAPRYD+ KD W+T+V +++ VGD+ Sbjct: 56 LGDVVGGLPPA---LAAMGHRVMTIAPRYDQYKDTWDTNVLVEVIVGDR 101 HSP 2 Score: 39.2762 bits (90), Expect = 5.574e-12 Identity = 21/47 (44.68%), Postives = 28/47 (59.57%), Query Frame = 3 Query: 285 MASKLATSRQAGRNGFRSQNGPSLMIVCGVGLNILFVGTEVAPWNKT 425 +A + AT+ + RN R+ S IVC G+ I+FV TEV PW KT Sbjct: 11 LAKRRATNYETHRNSSRT----SSPIVCSTGMPIIFVATEVHPWCKT 53
BLAST of EY665309 vs. ExPASy Swiss-Prot
Match: SSG1_PEA (Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Pisum sativum PE=1 SV=1) HSP 1 Score: 56.225 bits (134), Expect = 1.580e-11 Identity = 23/35 (65.71%), Postives = 31/35 (88.57%), Query Frame = 1 Query: 469 AAYGHRVMTIAPRYDRNKDAWETDVEIDLKVGDKI 573 A GHRVMT++PRYD+ KDAW+T+V +++KVGDKI Sbjct: 107 AGNGHRVMTVSPRYDQYKDAWDTNVLVEVKVGDKI 141 HSP 2 Score: 34.2686 bits (77), Expect = 1.580e-11 Identity = 24/62 (38.71%), Postives = 35/62 (56.45%), Query Frame = 3 Query: 240 GLRSLNIIDELQVKTMASKLATSRQAGRNGFRSQNGPSLMIVCGVGLNILFVGTEVAPWNKT 425 GLRSLN +L V+T + +S + ++ + IVCG+ L +FVG EV PW+KT Sbjct: 44 GLRSLN---KLHVRTARATSGSSDTSEKSLGK--------IVCGMSL--VFVGAEVGPWSKT 92
BLAST of EY665309 vs. ExPASy Swiss-Prot
Match: SSG1_ORYSJ (Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Oryza sativa subsp. japonica GN=WAXY PE=1 SV=1) HSP 1 Score: 50.0618 bits (118), Expect = 3.455e-11 Identity = 21/34 (61.76%), Postives = 27/34 (79.41%), Query Frame = 1 Query: 469 AAYGHRVMTIAPRYDRNKDAWETDVEIDLKVGDK 570 AA GHRVM I+PRYD+ KDAW+T V ++KV D+ Sbjct: 113 AANGHRVMVISPRYDQYKDAWDTSVVAEIKVADR 146 HSP 2 Score: 39.2762 bits (90), Expect = 3.455e-11 Identity = 20/55 (36.36%), Postives = 31/55 (56.36%), Query Frame = 3 Query: 264 DELQVKTMASKLATSRQAGRNGFRSQNGPSLMIVC-GVGLNILFVGTEVAPWNKT 425 D + S AT +Q S+ PS+++ G G+N++FVG E+APW+KT Sbjct: 44 DATSLSVTTSARATPKQQRSVQRGSRRFPSVVVYATGAGMNVVFVGAEMAPWSKT 98 The following BLAST results are available for this feature:
BLAST of EY665309 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 14
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Sequences
The
following sequences are available for this feature:
EST sequence >EY665309 ID=EY665309; Name=EY665309; organism=Citrus sinensis; type=EST; length=1003bpback to top |