CV884317
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV884317 vs. ExPASy Swiss-Prot
Match: GASA4_ARATH (Gibberellin-regulated protein 4 OS=Arabidopsis thaliana GN=GASA4 PE=1 SV=2) HSP 1 Score: 138.658 bits (348), Expect = 2.014e-32 Identity = 57/86 (66.28%), Postives = 66/86 (76.74%), Query Frame = -1 Query: 179 SIVMATETQNLL-DTNGYGPGSLKSYQCPSQCTRRCSQTQYHKPCMFFCQKCCAKCLCVPPGFYGNKAVCPCYNNWKTKSGGPKCP 433 ++VMA+ N+ YGPGSLK QCPS+C RRC +TQYHK C+ FC KCC KCLCVPPG+YGNK VC CYNNWKT+ GGPKCP Sbjct: 21 TMVMASSGSNVKWSQKRYGPGSLKRTQCPSECDRRCKKTQYHKACITFCNKCCRKCLCVPPGYYGNKQVCSCYNNWKTQEGGPKCP 106
BLAST of CV884317 vs. ExPASy Swiss-Prot
Match: GAST1_SOLLC (Protein GAST1 OS=Solanum lycopersicum GN=GAST1 PE=2 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 3.930e-28 Identity = 54/86 (62.79%), Postives = 57/86 (66.28%), Query Frame = -1 Query: 179 VMATETQNLLDTN---GYGPGSLKSYQCPSQCTRRCSQTQYHKPCMFFCQKCCAKCLCVPPGFYGNKAVCPCYNNWKTKSGGPKCP 427 +M E Q N G G L C +CT RCS+T Y KPCMFFCQKCCAKCLCVP G YGNK CPCYNNWKTK GGPKCP Sbjct: 27 IMRDEQQQQQRNNQLYGVSEGRLHPQDCQPKCTYRCSKTSYKKPCMFFCQKCCAKCLCVPAGTYGNKQSCPCYNNWKTKRGGPKCP 112
BLAST of CV884317 vs. ExPASy Swiss-Prot
Match: RSI1_SOLLC (Protein RSI-1 OS=Solanum lycopersicum GN=RSI-1 PE=2 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 6.938e-25 Identity = 45/68 (66.18%), Postives = 49/68 (72.06%), Query Frame = -1 Query: 179 GPGSLKSYQCPSQCTRRCSQTQYHKPCMFFCQKCCAKCLCVPPGFYGNKAVCPCYNNWKTKSGGPKCP 382 G L+ C +CT RCS T + KPCMFFCQKCCA CLCVP G YGNK CPCYNNWKT+ G PKCP Sbjct: 29 GYNKLRPTDCKPRCTYRCSATSHKKPCMFFCQKCCATCLCVPKGVYGNKQSCPCYNNWKTQEGKPKCP 96
BLAST of CV884317 vs. ExPASy Swiss-Prot
Match: SNAK1_SOLTU (Snakin-1 OS=Solanum tuberosum GN=SN1 PE=1 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 3.023e-12 Identity = 34/87 (39.08%), Postives = 45/87 (51.72%), Query Frame = -1 Query: 179 SISIVMATETQNLLDTNGYGPGSLKSYQCPSQCTRRCSQTQYHKPCMFFCQKCCAKCLCVPPGFYGNKAVCPCYNNWKTKSGGPKCP 439 ++ +V T +L+ T G S C S+C RCS+ C+ +C CC +C CVP G YGNK CPCY + K G KCP Sbjct: 7 TLLLVTLVITPSLIQTTMAG-----SSFCDSKCKLRCSKAGLADRCLKYCGICCEECKCVPSGTYGNKHECPCYRDKKNSKGKSKCP 88
BLAST of CV884317 vs. ExPASy Swiss-Prot
Match: GASA2_ARATH (Gibberellin-regulated protein 2 OS=Arabidopsis thaliana GN=GASA2 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.500e-11 Identity = 30/68 (44.12%), Postives = 39/68 (57.35%), Query Frame = -1 Query: 179 GPGSLKSYQCPSQCTRRCSQTQYHKPCMFFCQKCCAKCLCVPPGFYGNKAVCPCYNNWKTKSGGPKCP 382 G G +K C +C RCS++ K C+ C CC++C CVPPG GN +CPCY + T G KCP Sbjct: 33 GEGVVK-IDCGGRCKDRCSKSSRTKLCLRACNSCCSRCNCVPPGTSGNTHLCPCYASITTHGGRLKCP 99
BLAST of CV884317 vs. ExPASy Swiss-Prot
Match: GASA3_ARATH (Gibberellin-regulated protein 3 OS=Arabidopsis thaliana GN=GASA3 PE=2 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 5.702e-11 Identity = 29/68 (42.65%), Postives = 38/68 (55.88%), Query Frame = -1 Query: 179 GPGSLKSYQCPSQCTRRCSQTQYHKPCMFFCQKCCAKCLCVPPGFYGNKAVCPCYNNWKTKSGGPKCP 382 G G +K C +C RCS++ C+ C CC +C CVPPG GN +CPCY + T+ G KCP Sbjct: 33 GEGVVK-IDCGGRCKGRCSKSSRPNLCLRACNSCCYRCNCVPPGTAGNHHLCPCYASITTRGGRLKCP 99
BLAST of CV884317 vs. ExPASy Swiss-Prot
Match: GASA1_ARATH (Gibberellin-regulated protein 1 OS=Arabidopsis thaliana GN=GASA1 PE=1 SV=2) HSP 1 Score: 67.0106 bits (162), Expect = 7.447e-11 Identity = 31/83 (37.35%), Postives = 40/83 (48.19%), Query Frame = -1 Query: 179 VMATETQNLLDTNGYGPGSLKSYQCPSQCTRRCSQTQYHKPCMFFCQKCCAKCLCVPPGFYGNKAVCPCYNNWKTKSGGPKCP 427 ++ + +N NGY K C S C RC ++ + C C CC +C CVPPG YGN C CY + T G KCP Sbjct: 20 LVQADVENSQKKNGYA----KKIDCGSACVARCRLSRRPRLCHRACGTCCYRCNCVPPGTYGNYDKCQCYASLTTHGGRRKCP 98 The following BLAST results are available for this feature:
BLAST of CV884317 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CV884317 ID=CV884317; Name=CV884317; organism=Citrus sinensis; type=EST; length=571bpback to top |