CV884217
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV884217 vs. ExPASy Swiss-Prot
Match: UBC26_ARATH (Probable ubiquitin carrier protein E2 26 OS=Arabidopsis thaliana GN=UBC26 PE=2 SV=2) HSP 1 Score: 336.65 bits (862), Expect = 1.156e-91 Identity = 154/250 (61.60%), Postives = 193/250 (77.20%), Query Frame = -3 Query: 169 SLEQPSNKLVKRIQEEWKILENDLPDTIFVRVYESRMDLLRAVIVGAEGTPYHDGLFFFDVFFPSDYPNVPPNVHYHSGGLRLNPNLYNCGKVCLSLLNTWDGDKNEKWIPSMSTMLQVLVSIQALILNERPYFNEPGWESMDSMEEGERQSNMYNERAFILSLKTMLYTVRRPPKHFNDFVSGHFYQRAHDILAACKAYMDGAEVGSLVKGRVQKIHKGKKSCSPDFKASIAGHCDLLIKEFTYIGVKD 918 S +Q S VK++Q +WKILENDLP+ I VR ESRMDLLRAVI+GAEGTPYHDGLFFFD+ FP YP+VPPNVHYHSGGLR+NPNLYNCGKVCLSLL TW G EKW+P+ STMLQ+LVSIQALILNE+PYFNEPG+ GE +S +Y+E F+LSLKTM+Y++RRPP+HF ++V H++ R+HDI+ AC AY GA +GS+VKG VQ + + ++S S FK +A ++ EF +GVK+ Sbjct: 264 SSKQHSKNWVKKVQADWKILENDLPEAISVRACESRMDLLRAVIIGAEGTPYHDGLFFFDIQFPDTYPSVPPNVHYHSGGLRINPNLYNCGKVCLSLLGTWAGSAREKWLPNESTMLQLLVSIQALILNEKPYFNEPGYVQSAGTASGESKSKVYSENVFLLSLKTMVYSIRRPPQHFEEYVQNHYFVRSHDIVKACNAYKAGAPLGSMVKGGVQDLEEARQSGSKKFKTDVASFMQTVVDEFVKLGVKE 513
BLAST of CV884217 vs. ExPASy Swiss-Prot
Match: UBC25_ARATH (Probable ubiquitin carrier protein E2 25 OS=Arabidopsis thaliana GN=UBC25 PE=2 SV=1) HSP 1 Score: 327.791 bits (839), Expect = 5.370e-89 Identity = 157/251 (62.55%), Postives = 185/251 (73.71%), Query Frame = -3 Query: 163 EQPSNKLVKRIQEEWKILENDLPDTIFVRVYESRMDLLRAVIVGAEGTPYHDGLFFFDVFFPSDYPNVPPNVHYHSGGLRLNPNLYNCGKVCLSLLNTWDGDKNEKWIPSMSTMLQVLVSIQALILNERPYFNEPGWESMDSMEEGERQSNMYNERAFILSLKTMLYTVRRPPKHFNDFVSGHFYQRAHDILAACKAYMDGAEVGSLVKGRVQKIHKGKKSCSPDFKASIAGHCD-LLIKEFTYIGVKDCE 912 +Q S KRIQ+EW+ILE DLP+ IFVR YESRMDLLRAVI+GA+GTPYHDGLFFFD+FFP YP+ PP VHYHSGGLR+NPNLYNCGKVCLSLL TW G++ EKWIP+ STMLQVLVSIQ LILN++PYFNEPG+E GE S Y+E FILSLKTM+YT+RRPPK+F DF GHF+ AHD+L AC AY +GA G LVKG S F+ +A + +L+KEF +GV E Sbjct: 327 KQHSKDWAKRIQDEWRILEKDLPEMIFVRAYESRMDLLRAVIIGAQGTPYHDGLFFFDIFFPDTYPSTPPIVHYHSGGLRINPNLYNCGKVCLSLLGTWSGNQREKWIPNTSTMLQVLVSIQGLILNQKPYFNEPGYERSAGSAHGESTSKAYSENTFILSLKTMVYTMRRPPKYFEDFAYGHFFSCAHDVLKACNAYRNGATPGYLVKGAPDVEENSAGMSSLKFRTDVATFVETVLLKEFILLGVLGLE 577
BLAST of CV884217 vs. ExPASy Swiss-Prot
Match: UBC23_ARATH (Probable ubiquitin carrier protein E2 23 OS=Arabidopsis thaliana GN=UBC23 PE=2 SV=1) HSP 1 Score: 272.707 bits (696), Expect = 2.050e-72 Identity = 135/245 (55.10%), Postives = 165/245 (67.35%), Query Frame = -3 Query: 157 KRIQEEWKILENDLPDTIFVRVYESRMDLLRAVIVGAEGTPYHDGLFFFDVFFPSDYPNVPPNVHYHSGGLRLNPNLYNCGKVCLSLLNTWDGDKNEKWIPSMSTMLQVLVSIQALILNERPYFNEPGWESMDSMEEGERQSNMYNERAFILSLKTMLYTVRRPPKHFNDFVSGHFYQRAHDILAACKAYMDGAEVGSLVK-GRVQKIHKGKKSCSPDFKASIAGHCDLLIKEFTYIGVKDCENF 888 K++ ++WKIL+N+LPD IFVR YE RMDLLRAVIVGA GTPY DGLFFFD PSDYP+VPP+ +YHSGG RLNPNLY GKVCLSLLNTW G NE W P S++LQVLVS+Q L+LN +PYFNE G++ EGE+ S YNE F+L+ KTM+Y +R+PPK F + + HF +R + IL AC AYM G +GSL K V S S FK +A L + +G DC F Sbjct: 853 KKVDQDWKILQNNLPDGIFVRAYEDRMDLLRAVIVGAFGTPYQDGLFFFDFHLPSDYPSVPPSAYYHSGGWRLNPNLYEEGKVCLSLLNTWTGRGNEVWDPKSSSILQVLVSLQGLVLNSKPYFNEAGYDKQVGTAEGEKNSLGYNENTFLLNCKTMMYLMRKPPKDFEELIKDHFRKRGYYILKACDAYMKGYLIGSLTKDASVIDERSSANSTSVGFKLMLAKIAPKLFSALSEVGA-DCNEF 1096
BLAST of CV884217 vs. ExPASy Swiss-Prot
Match: UBC24_ARATH (Probable ubiquitin-conjugating enzyme E2 24 OS=Arabidopsis thaliana GN=UBC24 PE=2 SV=1) HSP 1 Score: 268.085 bits (684), Expect = 5.049e-71 Identity = 131/248 (52.82%), Postives = 168/248 (67.74%), Query Frame = -3 Query: 166 QPSNKLVKRIQEEWKILENDLPDTIFVRVYESRMDLLRAVIVGAEGTPYHDGLFFFDVFFPSDYPNVPPNVHYHSGGLRLNPNLYNCGKVCLSLLNTWDGDKNEKWIPSMSTMLQVLVSIQALILNERPYFNEPGWESMDSMEEGERQSNMYNERAFILSLKTMLYTVRRPPKHFNDFVSGHFYQRAHDILAACKAYMDGAEVGSLVKGRVQKIHKGKKSCSPDFKASIAGHCDLLIKEFTYIGVKDC 909 Q + VK++Q+EW LE +LP+TI+VRV E RMDLLRA +VGA GTPYHDGLFFFD+ P YP+ PP VHYHSGG+RLNPNLY G+VCLSLLNTW G E W S++LQ+L+S QAL+LNE+PYFNE G++ EGE+ S YNE AF+++ K+M+ +R+PPKHF V HF RA +LAACKAYM+G VGS + + S FK ++ L++ F+ IGV DC Sbjct: 658 QVTKSWVKKVQQEWSNLEANLPNTIYVRVCEERMDLLRAALVGAPGTPYHDGLFFFDIMLPPQYPHEPPMVHYHSGGMRLNPNLYESGRVCLSLLNTWSGSGTEVWNAGSSSILQLLLSFQALVLNEKPYFNEAGYDKQLGRAEGEKNSVSYNENAFLITCKSMISMLRKPPKHFEMLVKDHFTHRAQHVLAACKAYMEGVPVGSSA-----NLQGNSTTNSTGFKIMLSKLYPKLLEAFSEIGV-DC 899
BLAST of CV884217 vs. ExPASy Swiss-Prot
Match: BIRC6_HUMAN (Baculoviral IAP repeat-containing protein 6 OS=Homo sapiens GN=BIRC6 PE=1 SV=1) HSP 1 Score: 166.392 bits (420), Expect = 2.069e-40 Identity = 86/199 (43.22%), Postives = 120/199 (60.30%), Query Frame = -3 Query: 316 KRIQEEWKILENDLP----DTIFVRVYESRMDLLRAVIVGAEGTPYHDGLFFFDVFFPSDYPNVPPNVHYHSGG---LRLNPNLYNCGKVCLSLLNTWDGDKNEKWIPSMSTMLQVLVSIQALILNERPYFNEPGWESMDSMEEGERQSNMYNERAFILSLK-TMLYTVRRPPKHFNDFVSGHFYQRAHDILAACKAYM 888 +R+ +E L LP ++FVR E R+D+++ +I G TPY +G F FDV+FP DYP+ PP V+ + G +R NPNLYN GKVCLS+LNTW G EKW P S+ LQVLVS+Q+LIL PYFNEPG+E G + S Y+ ++K ML +R P F + + HFY + +I+A C+ ++ Sbjct: 4548 RRLAQEAVTLSTSLPLSSSSSVFVRCDEERLDIMKVLITGPADTPYANGCFEFDVYFPQDYPSSPPLVNLETTGGHSVRFNPNLYNDGKVCLSILNTWHGRPEEKWNPQTSSFLQVLVSVQSLILVAEPYFNEPGYERSRGTPSGTQSSREYDGNIRQATVKWAMLEQIRNPSPCFKEVIHKHFYLKRVEIMAQCEEWI 4746
BLAST of CV884217 vs. ExPASy Swiss-Prot
Match: UBE2O_MOUSE (Ubiquitin-conjugating enzyme E2 O OS=Mus musculus GN=Ube2o PE=1 SV=2) HSP 1 Score: 165.236 bits (417), Expect = 4.609e-40 Identity = 86/182 (47.25%), Postives = 114/182 (62.64%), Query Frame = -3 Query: 361 SNKLVKRIQEEWKILENDLPDTIFVRVYESRMDLLRAVIVGAEGTPYHDGLFFFDVFFPSDYPNVPPNVHYHSG-GLRLNPNLYNCGKVCLSLLNTWDGDKNEKWIPSMSTMLQVLVSIQALILNERPYFNEPGWESMDSMEEGERQSNMYNERAFILSLKTMLYTVRRPPKHFNDFVSGHF 903 + K +++E +L LPD I V+ +E RMDL A+I G TPY DGL+ FD+ P+ YP VPP+ Y S RLNPNLY+ GKVC+SLL TW G E+W S S++LQVL+SIQ LIL PY+NE G++S ++EG S YNE A I +++M VRRPP+ F + HF Sbjct: 948 AKKFFSTVRKEMALLATSLPDGIMVKTFEDRMDLFSALIKGPTRTPYEDGLYLFDIQLPNIYPAVPPHFCYLSQCSGRLNPNLYDNGKVCVSLLGTWIGKGTERWT-SKSSLLQVLISIQGLILVNEPYYNEAGFDSDRGLQEGYENSRCYNEMALIRVVQSMTQLVRRPPEVFEQEIRQHF 1128
BLAST of CV884217 vs. ExPASy Swiss-Prot
Match: UBE2O_HUMAN (Ubiquitin-conjugating enzyme E2 O OS=Homo sapiens GN=UBE2O PE=1 SV=3) HSP 1 Score: 164.081 bits (414), Expect = 1.027e-39 Identity = 105/282 (37.23%), Postives = 154/282 (54.61%), Query Frame = -3 Query: 67 SNKLVKRIQEEWKILENDLPDTIFVRVYESRMDLLRAVIVGAEGTPYHDGLFFFDVFFPSDYPNVPPNVHYHSG-GLRLNPNLYNCGKVCLSLLNTWDGDKNEKWIPSMSTMLQVLVSIQALILNERPYFNEPGWESMDSMEEGERQSNMYNERAFILSLKTMLYTVRRPPKHFNDFVSGHFYQRAHDILAACKAYMDGAEVGSLVKGRVQKIHKG--KKSCSPDFKASIAGHCDLLIKEFTYIGVKDCENFLTQAKAEVPGVGNEPESGNEPESGNRGFHS 903 + K +++E +L LP+ I V+ +E RMDL A+I G TPY DGL+ FD+ P+ YP VPP+ Y S RLNPNLY+ GKVC+SLL TW G E+W S S++LQVL+SIQ LIL PY+NE G++S ++EG S YNE A I +++M VRRPP+ F + HF ++ ++++ E +L++ + Q + G K S SP+ A + E + G ++ E+ PG E G++ E G +G S Sbjct: 951 AKKFFSTVRKEMALLATSLPEGIMVKTFEDRMDLFSALIKGPTRTPYEDGLYLFDIQLPNIYPAVPPHFCYLSQCSGRLNPNLYDNGKVCVSLLGTWIGKGTERWT-SKSSLLQVLISIQGLILVNEPYYNEAGFDSDRGLQEGYENSRCYNEMALIRVVQSMTQLVRRPPEVFEQEIRQHFSTGGWRLVNRIESWL---ETHALLE-KAQALPNGVPKASSSPEPPA---------VAELSDSGQQEPED-----GGPAPG---EASQGSDSEGGAQGLAS 1210
BLAST of CV884217 vs. ExPASy Swiss-Prot
Match: UBC3_MIMIV (Probable ubiquitin-conjugating enzyme E2 R521 OS=Acanthamoeba polyphaga mimivirus GN=MIMI_R521 PE=3 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 7.128e-33 Identity = 79/217 (36.41%), Postives = 116/217 (53.46%), Query Frame = -3 Query: 265 VKRIQEEWKILENDLP----DTIFVRVYESRMDLLRAVIVGAEGTPYHDGLFFFDVFFPSDYPNVPPNVHYHS---GGLRLNPNLYNCGKVCLSLLNTWDGDKNEKWIPSMSTMLQVLVSIQALILNERPYFNEPGWESMDSMEEGERQSNMYNERAFILSLK-TMLYTVRRPPKHFNDFVSGHFYQRAHDILAACKAYMDGAEVGSLVKGRVQKIH 891 +K I E +LP +I+ R + +I G E +PY G F F ++ PS YPN P V + G +R NPNLY GKVCLS+L TW G E WIP +S+MLQV++SIQ+L+L PYFNEPG+ES ++G + S YN++ +K M+ ++ P F + HF +A I C+ +++ A + K QK++ Sbjct: 1215 LKAISRELLSHSKNLPVEYGSSIYYRYSPENIRYHEFIITGPEDSPYDSGCFHFRMYNPSAYPNTSPFVSMTTTGHGSVRFNPNLYADGKVCLSILGTWRGQAGESWIPGVSSMLQVMISIQSLVLISEPYFNEPGYESSRGTDKGNKLSTEYNQKVRFNCMKWAMIDVIKNPVPGFESMIKKHFSIKAPHIKQVCQTWINEAPDNN--KSEYQKLY 1429
BLAST of CV884217 vs. ExPASy Swiss-Prot
Match: UBC17_CAEEL (Probable ubiquitin-conjugating enzyme protein 17 OS=Caenorhabditis elegans GN=ubc-17 PE=2 SV=2) HSP 1 Score: 114.005 bits (284), Expect = 1.219e-24 Identity = 60/124 (48.39%), Postives = 82/124 (66.13%), Query Frame = -3 Query: 538 KRIQEEWKILENDLP----DTIFVRVYESRMDLLRAVIVGAEGTPYHDGLFFFDVFFPSDYPNVPPNVHY---HSGGLRLNPNLYNCGKVCLSLLNTWDGDKNEKWIPSMSTMLQVLVSIQALI 888 KRI +E + N LP ++I+V E R+D+++ +I G + TPY +GLF FD+FFP+ YP PP + SG +R NPNLYN GK+CLS+L TW+G EKW P S ++QVLVSIQ +I Sbjct: 412 KRIAKELASIANALPLNASNSIYVCYDEGRVDIIKVLISGPDDTPYANGLFEFDIFFPTGYPFSPPKCAFLTTGSGNVRFNPNLYNDGKICLSILGTWEGRPEEKWNPYCS-LMQVLVSIQEVI 534
BLAST of CV884217 vs. ExPASy Swiss-Prot
Match: UBE2Z_XENTR (Ubiquitin-conjugating enzyme E2 Z OS=Xenopus tropicalis GN=ube2z PE=2 SV=2) HSP 1 Score: 98.5969 bits (244), Expect = 5.298e-20 Identity = 64/158 (40.51%), Postives = 82/158 (51.90%), Query Frame = -3 Query: 448 EQPSNKLVKRIQEEWKILENDLPDTIFVRVYESRMDLLRAVIVGAEGTPYHDGLFFFDVFFPSDYPNVPPNVHYHSGG---LRLNPNLYNCGKVCLSLLNTWDGDKNEKWIPSMSTMLQVLVSIQALILNERPYFNEPGWESMDSMEEGERQSNMYNE 912 E+ SN+ V RI+ + + + P +FV M + A+I G TPY G F F P DYP PP V + G +R NPN Y GKVCLS+L TW G W P+ S + VL+SIQ+L + E PY NEPG+E E S YNE Sbjct: 53 ERASNQCVLRIKRDIMSIYKEPPPGMFVVPDPHDMTKIHALITGPFDTPYEGGFFLFLFRCPPDYPIHPPRVKLMTTGNNTVRFNPNFYRNGKVCLSILGTWTG---PAWSPAQS-LSSVLISIQSL-MTENPYHNEPGFE----QERHSGDSKNYNE 201 The following BLAST results are available for this feature:
BLAST of CV884217 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 21
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Sequences
The
following sequences are available for this feature:
EST sequence >CV884217 ID=CV884217; Name=CV884217; organism=Citrus sinensis; type=EST; length=920bpback to top |