EY665129

Overview
NameEY665129
Unique NameEY665129
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length914
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY665129_ssr26 microsatellite EY665129_ssr26:26..45. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY665129 vs. ExPASy Swiss-Prot
Match: CHAC2_DANRE (Cation transport regulator-like protein 2 OS=Danio rerio GN=chac2 PE=2 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 1.064e-28
Identity = 70/165 (42.42%), Postives = 95/165 (57.58%), Query Frame = 3
Query:  171 WVFGYGSLVWNPGFEYDEKILGFIKDYRRVFDLACIDHRGTPQHPARTCTLEKSQETICWGVAYCVRGGPEKERLAMEYLERRECEYDSKTLVDFYREGEPSQPALTGVIVFTSTPDKVSNKYYLGPAPLEEMARQIATAVGPCGNNRDYLFKLENAMFDIGHDD 665
            WVFGYGSL+W   F Y++K +GF+K + R F     DHRG P  P R  TL +  E   WGVAY +  G E+E    EYL+ RE        V F+ + E  QP +   +++  + D   N  YLGPAPLE +A+QI  +VGP G N DYLF+L +A+  +  +D
Sbjct:    2 WVFGYGSLIWKVDFPYEDKRVGFVKGFSRRFWQGSTDHRGVPGKPGRVVTLIEDPEGCVWGVAYKLPSGQEQE--VKEYLDYREKGGYGVITVTFHPKDEQQQP-MQDTLLYIGSCD---NPNYLGPAPLETIAQQIVKSVGPSGKNTDYLFELADALRQLVPED 160          
BLAST of EY665129 vs. ExPASy Swiss-Prot
Match: CHAC2_CHICK (Cation transport regulator-like protein 2 OS=Gallus gallus GN=chac2 PE=2 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.815e-28
Identity = 74/165 (44.85%), Postives = 94/165 (56.97%), Query Frame = 3
Query:  171 WVFGYGSLVWNPGFEYDEKILGFIKDYRRVFDLACIDHRGTPQHPARTCTLEKSQETICWGVAYCVRGGPEKERLAMEYLERRECEYDSKTLVDFYREGEPSQPALTGVIVFTSTPDKVSNKYYLGPAPLEEMARQIATAVGPCGNNRDYLFKLENAMFDIGHDD 665
            WVFGYGSL+W   F Y EK++G I+ Y R F     DHRG P  P R  TL +  E   WGVAY +  G E E  A  YL+ RE      T V FY +    +P    V+++  T D   N  YLGPAPL+E+A QI  AVGP G N +YLF+L N+M ++  +D
Sbjct:    2 WVFGYGSLIWKVDFPYQEKMVGRIRGYSRRFWQGSTDHRGVPGKPGRVVTLVEDPEGCVWGVAYRLPAGQECEVKA--YLDFREKGGYRTTTVVFYPKDSSIKP--FDVLLYIGTRD---NPNYLGPAPLQEIAEQIIDAVGPSGRNTEYLFELANSMRNLVPED 159          
BLAST of EY665129 vs. ExPASy Swiss-Prot
Match: CHAC2_XENLA (Cation transport regulator-like protein 2 OS=Xenopus laevis GN=chac2 PE=2 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 3.096e-28
Identity = 73/165 (44.24%), Postives = 95/165 (57.58%), Query Frame = 3
Query:  171 WVFGYGSLVWNPGFEYDEKILGFIKDYRRVFDLACIDHRGTPQHPARTCTLEKSQETICWGVAYCVRGGPEKERLAMEYLERRECEYDSKTLVDFYREGEPSQPALTGVIVFTSTPDKVSNKYYLGPAPLEEMARQIATAVGPCGNNRDYLFKLENAMFDIGHDD 665
            WVFGYGSL+W   F Y EK++G+I  Y R F     DHRG P  P R  TL +  E   WGVAY +  G E+E  A  YL+ RE      + V FY +    QP    V+++  T D   N  YLGPAPLE++A QI  AVGP G N +YLF+L N++ ++  +D
Sbjct:    2 WVFGYGSLIWKVDFPYVEKLVGYIMCYSRRFWQGSTDHRGVPGKPGRVVTLVEDPEGCVWGVAYRLPEGKEEEVKA--YLDFREKGGYRTSTVVFYPKDPSIQP--FNVLLYIGTCD---NPNYLGPAPLEDIAEQILNAVGPSGRNTEYLFELANSLRNLVPED 159          
BLAST of EY665129 vs. ExPASy Swiss-Prot
Match: CHAC2_HUMAN (Cation transport regulator-like protein 2 OS=Homo sapiens GN=CHAC2 PE=2 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 4.470e-27
Identity = 69/158 (43.67%), Postives = 91/158 (57.59%), Query Frame = 3
Query:  171 WVFGYGSLVWNPGFEYDEKILGFIKDYRRVFDLACIDHRGTPQHPARTCTLEKSQETICWGVAYCVRGGPEKERLAMEYLERRECEYDSKTLVDFYREGEPSQPALTGVIVFTSTPDKVSNKYYLGPAPLEEMARQIATAVGPCGNNRDYLFKLENAM 644
            WVFGYGSL+W   F Y +K++G+I +Y R F     DHRG P  P R  TL +      WGVAY +  G E+E  A  YL+ RE      T V FY +   ++P    V+++  T D   N  YLGPAPLE++A QI  A GP G N +YLF+L N++
Sbjct:    2 WVFGYGSLIWKVDFPYQDKLVGYITNYSRRFWQGSTDHRGVPGKPGRVVTLVEDPAGCVWGVAYRLPVGKEEEVKA--YLDFREKGGYRTTTVIFYPKDPTTKP--FSVLLYIGTCD---NPDYLGPAPLEDIAEQIFNAAGPSGRNTEYLFELANSI 152          
BLAST of EY665129 vs. ExPASy Swiss-Prot
Match: CHAC2_RAT (Cation transport regulator-like protein 2 OS=Rattus norvegicus GN=Chac2 PE=2 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.699e-26
Identity = 68/165 (41.21%), Postives = 93/165 (56.36%), Query Frame = 3
Query:  171 WVFGYGSLVWNPGFEYDEKILGFIKDYRRVFDLACIDHRGTPQHPARTCTLEKSQETICWGVAYCVRGGPEKERLAMEYLERRECEYDSKTLVDFYREGEPSQPALTGVIVFTSTPDKVSNKYYLGPAPLEEMARQIATAVGPCGNNRDYLFKLENAMFDIGHDD 665
            WVFGYGSL+W   F Y +K++G+I +Y R F     DHRG P  P R  TL +      WGVAY +  G E+E     YL+ RE      T V FY +   ++P    V+++  T D   N  YLGPAPLE++A QI  A GP G N +YLF+L +++  +  +D
Sbjct:    2 WVFGYGSLIWKVDFPYQDKLVGYITNYSRRFWQGSTDHRGVPGKPGRVVTLVEDPGGSVWGVAYKLPVGKEEE--VKTYLDFREKGGYRTTTVIFYPKDSTTKP--FSVLLYIGTCD---NPNYLGPAPLEDIAEQIFNAAGPSGRNTEYLFELADSIRKLVPED 159          
BLAST of EY665129 vs. ExPASy Swiss-Prot
Match: CHAC2_MOUSE (Cation transport regulator-like protein 2 OS=Mus musculus GN=Chac2 PE=2 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.699e-26
Identity = 68/165 (41.21%), Postives = 93/165 (56.36%), Query Frame = 3
Query:  171 WVFGYGSLVWNPGFEYDEKILGFIKDYRRVFDLACIDHRGTPQHPARTCTLEKSQETICWGVAYCVRGGPEKERLAMEYLERRECEYDSKTLVDFYREGEPSQPALTGVIVFTSTPDKVSNKYYLGPAPLEEMARQIATAVGPCGNNRDYLFKLENAMFDIGHDD 665
            WVFGYGSL+W   F Y +K++G+I +Y R F     DHRG P  P R  TL +      WGVAY +  G E+E     YL+ RE      T V FY +   ++P    V+++  T D   N  YLGPAPLE++A QI  A GP G N +YLF+L +++  +  +D
Sbjct:    2 WVFGYGSLIWKVDFPYQDKLVGYITNYSRRFWQGSTDHRGVPGKPGRVVTLVEDPGGSVWGVAYKLPVGKEEE--VKTYLDFREKGGYRTTTVIFYPKDSTTKP--FSVLLYIGTCD---NPNYLGPAPLEDIAEQIFNAAGPSGRNTEYLFELADSVRKLVPED 159          
BLAST of EY665129 vs. ExPASy Swiss-Prot
Match: CHAC1_MOUSE (Cation transport regulator-like protein 1 OS=Mus musculus GN=Chac1 PE=2 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.590e-24
Identity = 68/161 (42.24%), Postives = 89/161 (55.28%), Query Frame = 3
Query:  171 WVFGYGSLVWNPGFEYDEKILGFIKDYRRVFDLACIDHRGTPQHPARTCTLEKSQETICWGVAYCVRGGPEKERLAMEYLERREC---EYDSKTLVDFYREGEPSQPALTGVIVFTSTPDKVSNKYYLGPAPLEEMARQIATAVGPCGNNRDYLFKLENAM 644
            W+FGYGSLVW P F Y +  +GF++ Y R F      HRG+ + P R  TL +  E   WGVAY VRG  E+   A++YL  RE     YD+K  V FY +  P QP     + + +TP    N  YLGPAP E +A QI    G  G+N +YL +L + M
Sbjct:   35 WIFGYGSLVWKPDFAYSDSRVGFVRGYSRRFWQGDTFHRGSDKMPGRVVTLLEDHEGCTWGVAYQVRG--EQVNEALKYLNVREAVLGGYDTKE-VTFYPQDTPDQPLT--ALAYVATP---QNPGYLGPAPEEVIATQILACRGFSGHNLEYLLRLADFM 187          
BLAST of EY665129 vs. ExPASy Swiss-Prot
Match: CHAC1_HUMAN (Cation transport regulator-like protein 1 OS=Homo sapiens GN=CHAC1 PE=1 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 4.626e-24
Identity = 67/161 (41.61%), Postives = 89/161 (55.28%), Query Frame = 3
Query:  171 WVFGYGSLVWNPGFEYDEKILGFIKDYRRVFDLACIDHRGTPQHPARTCTLEKSQETICWGVAYCVRGGPEKERLAMEYLERREC---EYDSKTLVDFYREGEPSQPALTGVIVFTSTPDKVSNKYYLGPAPLEEMARQIATAVGPCGNNRDYLFKLENAM 644
            W+FGYGSLVW P F Y +  +GF++ Y R F      HRG+ + P R  TL +  E   WGVAY V+G  E+   A++YL  RE     YD+K  V FY +  P QP     + + +TP    N  YLGPAP E +A QI    G  G+N +YL +L + M
Sbjct:   34 WIFGYGSLVWRPDFAYSDSRVGFVRGYSRRFWQGDTFHRGSDKMPGRVVTLLEDHEGCTWGVAYQVQG--EQVSKALKYLNVREAVLGGYDTKE-VTFYPQDAPDQP--LKALAYVATP---QNPGYLGPAPEEAIATQILACRGFSGHNLEYLLRLADFM 186          
BLAST of EY665129 vs. ExPASy Swiss-Prot
Match: CHAC2_BOVIN (Cation transport regulator-like protein 2 OS=Bos taurus GN=CHAC2 PE=2 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 1.031e-23
Identity = 67/165 (40.61%), Postives = 89/165 (53.94%), Query Frame = 3
Query:  171 WVFGYGSLVWNPGFEYDEKILGFIKDYRRVFDLACIDHRGTPQHPARTCTLEKSQETICWGVAYCVRGGPEKERLAMEYLERRECEYDSKTLVDFYREGEPSQPALTGVIVFTSTPDKVSNKYYLGPAPLEEMARQIATAVGPCGNNRDYLFKLENAMFDIGHDD 665
            WVFGYGSL+W   F Y +K++G+I  Y R F     DHRG P   +             WGVAY +  G E+E  A  YL+ RE      T V FY +   ++P    V+++  T D   N  YLGPAPLE++A QI  A GP G N +YLF+L N+M  +  +D
Sbjct:    2 WVFGYGSLIWKVDFPYQDKLVGYISGYSRRFWQGSTDHRGVPGKGS------------VWGVAYKLPVGKEEEVKA--YLDFREKGGYRTTTVIFYPKDSTTEP--FSVLLYIGTRD---NPNYLGPAPLEDIAEQIFNAAGPSGKNTEYLFELANSMRSLVPED 147          
BLAST of EY665129 vs. ExPASy Swiss-Prot
Match: CHAC1_DANRE (Cation transport regulator-like protein 1 OS=Danio rerio GN=chac1 PE=2 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 3.916e-23
Identity = 65/164 (39.63%), Postives = 86/164 (52.44%), Query Frame = 3
Query:  159 KMVFWVFGYGSLVWNPGFEYDEKILGFIKDYRRVFDLACIDHRGTPQHPARTCTLEKSQETICWGVAYCVRGGPEKERLAMEYLERRECEYDS--KTLVDFYREGEPSQPALTGVIVFTSTPDKVSNKYYLGPAPLEEMARQIATAVGPCGNNRDYLFKLENAM 644
            K   W+FGYGSLVW P F+Y    +G+IK Y+R F      HRG  + P R  TL +  +   WGVA+ V G   +E  +++YL  RE          VDF+  G    P     +V+ +TPD   N  YLGPA  EE+A QIA   G  G+N +YL +L   M
Sbjct:   10 KSSLWIFGYGSLVWKPDFKYKRSKVGYIKGYKRRFWHGDNFHRGDDEMPGRVVTLIEEDDVCTWGVAFEVTGSQMEE--SLKYLNVREAVRGGYLTRAVDFFPRGTNQPP--VQALVYIATPD---NPIYLGPASTEEIASQIAVCKGNSGHNIEYLLRLAEFM 166          
The following BLAST results are available for this feature:
BLAST of EY665129 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 13
Match NameE-valueIdentityDescription
CHAC2_DANRE1.064e-2842.42Cation transport regulator-like protein 2 OS=Danio... [more]
CHAC2_CHICK1.815e-2844.85Cation transport regulator-like protein 2 OS=Gallu... [more]
CHAC2_XENLA3.096e-2844.24Cation transport regulator-like protein 2 OS=Xenop... [more]
CHAC2_HUMAN4.470e-2743.67Cation transport regulator-like protein 2 OS=Homo ... [more]
CHAC2_RAT1.699e-2641.21Cation transport regulator-like protein 2 OS=Rattu... [more]
CHAC2_MOUSE1.699e-2641.21Cation transport regulator-like protein 2 OS=Mus m... [more]
CHAC1_MOUSE1.590e-2442.24Cation transport regulator-like protein 1 OS=Mus m... [more]
CHAC1_HUMAN4.626e-2441.61Cation transport regulator-like protein 1 OS=Homo ... [more]
CHAC2_BOVIN1.031e-2340.61Cation transport regulator-like protein 2 OS=Bos t... [more]
CHAC1_DANRE3.916e-2339.63Cation transport regulator-like protein 1 OS=Danio... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-074-D03-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665129 ID=EY665129; Name=EY665129; organism=Citrus sinensis; type=EST; length=914bp
CAATTGCACCCACACGAGAGACGGGGAGAGAGAGAGAGAGAGAGAGGAAG
CGAAGAGAAATAGAAAGAGAGAATACAGAATCCTAACCTTAGACGTTTTA
GCTTGTTTCGTTTCCCTCTTTTGCTTCAAGTTTCTTCCTTTCTCTCGCGA
TTTCCTTGAAAATGGTGTTCTGGGTTTTTGGGTATGGATCATTGGTGTGG
AACCCAGGGTTTGAATATGATGAGAAAATTTTAGGCTTCATCAAGGACTA
CAGGCGCGTGTTTGATCTTGCATGCATTGATCACAGGGGTACACCTCAAC
ACCCGGCTAGAACTTGCACGCTGGAAAAATCTCAAGAAACCATTTGTTGG
GGTGTTGCTTATTGTGTCCGAGGAGGTCCTGAAAAGGAAAGACTCGCTAT
GGAGTATTTGGAACGAAGAGAATGCGAGTACGACTCTAAGACCCTTGTAG
ACTTTTACAGGGAAGGGGAGCCTTCACAGCCGGCTCTAACTGGGGTTATA
GTTTTCACGTCTACTCCAGACAAAGTATCAAACAAGTATTATCTGGGGCC
TGCTCCATTGGAGGAAATGGCTAGGCAAATTGCAACGGCTGTCGGACCCT
GTGGAAACAATAGAGACTACCTTTTCAAGTTGGAGAATGCCATGTTTGAT
ATTGGTCATGATGACCGACTACATATAGAGCTGGGCAATGAAGTGAGGAA
AGAGCTGGNNACTGCTGAAAAAGGATTCTCAAGGAGAGGAGTTGGTTGGG
TCATCATNCCGCATGCCGCTCACATATCTCATATTCCAACCCTTCACTGG
GTCTACGCCCTGAGGCGGTGCCATGGATNCATANAATCACAAGCTGACAG
ACACATAGGGCCTAGGGACTTATCAAGATATCAGCACGTAGCTAACACAT
CGCCTCATCTTGTT
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