EY664960

Overview
NameEY664960
Unique NameEY664960
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length907
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10695 contig Csv1_Contig10695:761..1667. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY664960 vs. ExPASy Swiss-Prot
Match: FATB_GOSHI (Myristoyl-acyl carrier protein thioesterase, chloroplastic OS=Gossypium hirsutum GN=FATB1 PE=1 SV=1)

HSP 1 Score: 441.81 bits (1135), Expect = 2.522e-123
Identity = 212/273 (77.66%), Postives = 241/273 (88.28%), Query Frame = 1
Query:    1 MLVDPFGIGKIPQDGFIFRQNFSIRSYEIGADGTASIETLMNHLQETALNHVMTAGLLDAGFGATPAMAKKNLIWVVTRMQVVVDRYPTWNDVVNVETWVSASGKNGMRRDWLIRNAKTGETLTRATSLWVMMNKLTRRLSKMPDEVRQEIEPYFLNSDPVVDEDSRKLPKLGDSTADYVRRGLTPXWSDLDVNQHVNNVKYIGWILESAPQQILESHQLASVTLEYXRECGKDSVLQSLTAVSDKDIGNLVNFGSVECQHLLRLEEGAEVLR 819
            M++DPFGIGKI QDG +F QNFSIRSYEIGAD TASIETLMNHLQETA+NH  +AGLL  GFGATP M KKNLIWVVTRMQVVVDRYPTW DVV V+TWVSASGKNGMRRDWL+ N++TGE LTRATS+WVMMNKLTRRLSK+P+EVR EIEP+F+NSDPV+ EDS+KL KL DSTA++V +GLTP WSDLDVNQHVNNVKYIGWILESAP  ILESH+L+++TLEY RECG+DSVLQSLT VSD +  N VN G   CQHLLRL++GAE++R
Sbjct:  117 MVIDPFGIGKIVQDGLVFSQNFSIRSYEIGADQTASIETLMNHLQETAINHCRSAGLLGEGFGATPEMCKKNLIWVVTRMQVVVDRYPTWGDVVQVDTWVSASGKNGMRRDWLVSNSETGEILTRATSVWVMMNKLTRRLSKIPEEVRGEIEPFFMNSDPVLAEDSQKLVKLDDSTAEHVCKGLTPKWSDLDVNQHVNNVKYIGWILESAPLPILESHELSALTLEYRRECGRDSVLQSLTTVSDSNTENAVNVGEFNCQHLLRLDDGAEIVR 389          
BLAST of EY664960 vs. ExPASy Swiss-Prot
Match: FATB_CUPHO (Myristoyl-acyl carrier protein thioesterase, chloroplastic OS=Cuphea hookeriana GN=FATB1 PE=2 SV=1)

HSP 1 Score: 389.808 bits (1000), Expect = 1.137e-107
Identity = 187/273 (68.50%), Postives = 227/273 (83.15%), Query Frame = 1
Query:    1 MLVDPFGIGKIPQDGFIFRQNFSIRSYEIGADGTASIETLMNHLQETALNHVMTAGLLDAGFGATPAMAKKNLIWVVTRMQVVVDRYPTWNDVVNVETWVSASGKNGMRRDWLIRNAKTGETLTRATSLWVMMNKLTRRLSKMPDEVRQEIEPYFLNSDPVVDEDSRKLPKLGDSTADYVRRGLTPXWSDLDVNQHVNNVKYIGWILESAPQQILESHQLASVTLEYXRECGKDSVLQSLTAVSDKDIGNLVNFGSVECQHLLRLEEGAEVLR 819
            MLVDPFG+G I QDG +FRQNFSIRSYEIGAD TASIET+MNHLQETALNHV  AGL + GFG TP M K++LIWVV +MQV+V+RYPTW D V V TWV+ SGKNGMRRDWLI +  TGE LTRA+S+WVMMN+ TRRLSK+PDEVR EIEP+F++S PV+++D RKLPKL + TAD +R+GLTP W+DLDVNQHVNNVKYIGWILES P ++LE+ +L S+TLEY RECG++SVL+SLTA+     G    +GS + QHLLRLE+G E+++
Sbjct:  121 MLVDPFGLGSIVQDGLVFRQNFSIRSYEIGADRTASIETVMNHLQETALNHVKIAGLSNDGFGRTPEMYKRDLIWVVAKMQVMVNRYPTWGDTVEVNTWVAKSGKNGMRRDWLISDCNTGEILTRASSVWVMMNQKTRRLSKIPDEVRNEIEPHFVDSPPVIEDDDRKLPKLDEKTADSIRKGLTPRWNDLDVNQHVNNVKYIGWILESTPPEVLETQELCSLTLEYRRECGRESVLESLTAMDPSGGG----YGS-QFQHLLRLEDGGEIVK 388          
BLAST of EY664960 vs. ExPASy Swiss-Prot
Match: FATB_UMBCA (Lauroyl-acyl carrier protein thioesterase, chloroplastic OS=Umbellularia californica GN=FATB1 PE=1 SV=1)

HSP 1 Score: 312.383 bits (799), Expect = 2.307e-84
Identity = 156/274 (56.93%), Postives = 197/274 (71.90%), Query Frame = 1
Query:    1 MLVDPFGIGKIPQDGFIFRQNFSIRSYEIGADGTASIETLMNHLQETALNHVMTAGLLDAGFGATPAMAKKNLIWVVTRMQVVVDRYPTWNDVVNVETWVSASGKNGMRRDWLIRNAKTGETLTRATSLWVMMNKLTRRLSKMPDEVRQEIEPYFLNSDPVVDEDSRKLPKLGDSTADYVRRGLTPXWSDLDVNQHVNNVKYIGWILESAPQQILESHQLASVTLEYXRECGKDSVLQSLTAVSDKDIGNLVNFGSVECQHLLRLEEGAEVLRA 822
            +L D FG+      G +FR+ F+IRSYE+G D + SI  +MNH+QE  LNH  + G+L  GFG T  M+K++L+WVV R  V V+RYPTW D V VE W+ ASG NGMRRD+L+R+ KTGE LTR TSL V+MN  TRRLS +PDEVR EI P F+++  V D++ +KL KL DSTADY++ GLTP W+DLDVNQHVNN+KY+ W+ E+ P  I ESH ++S TLEY REC +DSVL+SLT VS    G     G V C HLL+LE G+EVLRA
Sbjct:   95 LLDDHFGL-----HGLVFRRTFAIRSYEVGPDRSTSILAVMNHMQEATLNHAKSVGILGDGFGTTLEMSKRDLMWVVRRTHVAVERYPTWGDTVEVECWIGASGNNGMRRDFLVRDCKTGEILTRCTSLSVLMNTRTRRLSTIPDEVRGEIGPAFIDNVAVKDDEIKKLQKLNDSTADYIQGGLTPRWNDLDVNQHVNNLKYVAWVFETVPDSIFESHHISSFTLEYRRECTRDSVLRSLTTVS----GGSSEAGLV-CDHLLQLEGGSEVLRA 358          
BLAST of EY664960 vs. ExPASy Swiss-Prot
Match: FATB_CINCA (Myristoyl-acyl carrier protein thioesterase, chloroplastic OS=Cinnamomum camphora GN=FATB1 PE=2 SV=1)

HSP 1 Score: 311.997 bits (798), Expect = 3.013e-84
Identity = 159/274 (58.03%), Postives = 195/274 (71.17%), Query Frame = 1
Query:    1 MLVDPFGIGKIPQDGFIFRQNFSIRSYEIGADGTASIETLMNHLQETALNHVMTAGLLDAGFGATPAMAKKNLIWVVTRMQVVVDRYPTWNDVVNVETWVSASGKNGMRRDWLIRNAKTGETLTRATSLWVMMNKLTRRLSKMPDEVRQEIEPYFLNSDPVVDEDSRKLPKLGDSTADYVRRGLTPXWSDLDVNQHVNNVKYIGWILESAPQQILESHQLASVTLEYXRECGKDSVLQSLTAVSDKDIGNLVNFGSVECQHLLRLEEGAEVLRA 822
            +L D FG       G +FR+ F+IRSYE+G D + SI  +MNHLQE ALNH  + G+L  GFG T  M+K++LIWVV R  V V+RYP W D V VE WV ASG NG R D+L+R+ KTGE LTR TSL VMMN  TRRLSK+P+EVR EI P F+++  V DE+ +K  KL DSTADY++ GLTP W+DLD+NQHVNN+KY+ WILE+ P  I ESH ++S T+EY REC  DSVLQSLT VS    G     G V C+HLL+LE G+EVLRA
Sbjct:   95 LLDDHFG-----PHGLVFRRTFAIRSYEVGPDRSTSIVAVMNHLQEAALNHAKSVGILGDGFGTTLEMSKRDLIWVVKRTHVAVERYPAWGDTVEVECWVGASGNNGRRHDFLVRDCKTGEILTRCTSLSVMMNTRTRRLSKIPEEVRGEIGPAFIDNVAVKDEEIKKPQKLNDSTADYIQGGLTPRWNDLDINQHVNNIKYVDWILETVPDSIFESHHISSFTIEYRRECTMDSVLQSLTTVS----GGSSEAGLV-CEHLLQLEGGSEVLRA 358          
BLAST of EY664960 vs. ExPASy Swiss-Prot
Match: FATA_CORSA (Oleoyl-acyl carrier protein thioesterase, chloroplastic (Fragment) OS=Coriandrum sativum GN=FATA PE=2 SV=1)

HSP 1 Score: 230.72 bits (587), Expect = 8.829e-60
Identity = 109/245 (44.49%), Postives = 161/245 (65.71%), Query Frame = 1
Query:    4 LVDPFGIGKIPQDGFIFRQNFSIRSYEIGADGTASIETLMNHLQETALNHVMTAGLLDAGFGATPAMAKKNLIWVVTRMQVVVDRYPTWNDVVNVETWVSASGKNGMRRDWLIRNAKTGETLTRATSLWVMMNKLTRRLSKMPDEVRQEIEPYFLNSDPV--VDEDSRKLPKLG--DSTADYVRRGLTPXWSDLDVNQHVNNVKYIGWILESAPQQILESHQLASVTLEYXRECGKDSVLQSLTA 726
            L +   +G + +DG  +++ F +R YE+G + TA++ET+ N LQE   NH  + G    GF  TP M K +LIWV  RM + + RYP W+DVV +ETW  + G+ G RRDW+I++  T E + RATS WVMMN+ TRRL K+ D+VR E   +   +  +   +E+++ L K+   +  A + R GL+P  +DLD+NQHVNNV YIGW+LES P+++L +H+L ++TL+Y REC  D V+ SLT+
Sbjct:   66 LAEKLRLGSLTEDGLSYKEKFIVRCYEVGINKTATVETIANLLQEVGGNHAQSVGFSTDGFATTPTMRKLHLIWVTARMHIEIYRYPAWSDVVEIETWCQSEGRIGTRRDWIIKDFATDEVIGRATSKWVMMNQDTRRLQKVSDDVRDEYLVFCPKTPRLSFPEENNKSLKKISKLEDPAQHSRLGLSPRRADLDMNQHVNNVAYIGWVLESIPKEVLYTHELETITLDYRRECQHDDVVDSLTS 310          
The following BLAST results are available for this feature:
BLAST of EY664960 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
FATB_GOSHI2.522e-12377.66Myristoyl-acyl carrier protein thioesterase, chlor... [more]
FATB_CUPHO1.137e-10768.50Myristoyl-acyl carrier protein thioesterase, chlor... [more]
FATB_UMBCA2.307e-8456.93Lauroyl-acyl carrier protein thioesterase, chlorop... [more]
FATB_CINCA3.013e-8458.03Myristoyl-acyl carrier protein thioesterase, chlor... [more]
FATA_CORSA8.829e-6044.49Oleoyl-acyl carrier protein thioesterase, chloropl... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-101-072-D09-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY664960 ID=EY664960; Name=EY664960; organism=Citrus sinensis; type=EST; length=907bp
ATGCTTGTTGACCCATTTGGGATTGGGAAAATACCTCAGGATGGTTTCAT
TTTCCGGCAAAATTTCTCAATTAGATCATATGAGATAGGTGCTGATGGTA
CTGCATCTATAGAGACATTAATGAATCATTTACAGGAAACAGCGCTTAAT
CATGTTATGACTGCTGGTCTTCTAGATGCTGGCTTTGGTGCAACCCCAGC
GATGGCTAAAAAGAACCTGATATGGGTGGTTACTCGGATGCAGGTTGTTG
TAGACCGCTATCCCACTTGGAATGATGTTGTAAATGTAGAAACTTGGGTT
AGTGCATCTGGAAAAAATGGTATGCGGCGTGATTGGCTCATTCGCAATGC
TAAGACAGGTGAAACATTAACAAGAGCAACCAGTCTGTGGGTAATGATGA
ATAAACTGACTAGGAGGTTGTCCAAAATGCCCGATGAAGTTCGTCAGGAA
ATTGAACCGTATTTTCTGAATTCTGACCCTGTTGTCGATGAGGATAGCAG
GAAATTACCAAAACTTGGCGACAGTACTGCAGATTATGTTCGTAGAGGTT
TAACTCCTANGTGGAGTGATTTAGATGTCAACCAGCATGTCAATAATGTG
AAGTACATTGGCTGGATCCTAGAGAGTGCTCCTCAGCAGATCTTGGAGAG
TCATCAGCTGGCATCTGTGACCCTGGAGTATANGAGGGAGTGCGGGAAGG
ACAGTGTGTTGCAGTCCCTGACTGCTGTCTCAGACAAGGACATTGGCAAT
TTGGTGAACTTTGGCAGTGTGGAGTGCCAGCACTTGCTCCGACTAGAGGA
AGGTGCTGAAGTTTTGAGAGCAGGACTGNATGGNAGCCAAAGGATGCCAC
ACTTTGGGGAATGTGGTCCATCCCTGCAGAAGCACTTAAACCCAAGTTCT
CGAGAAG
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