EY664865

Overview
NameEY664865
Unique NameEY664865
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length940
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY664865 vs. ExPASy Swiss-Prot
Match: JMJD4_DANRE (JmjC domain-containing protein 4 OS=Danio rerio GN=jmjd4 PE=2 SV=1)

HSP 1 Score: 199.134 bits (505), Expect = 2.972e-50
Identity = 107/238 (44.96%), Postives = 137/238 (57.56%), Query Frame = 3
Query:   12 LKDWHFAKEYPXYVAYRTPLIFCDDWLNMYLDHYRLHKDPESYQKDNDMCCSDYRFVYMGAKGSWTPLHADVFRSYSWSANVCGKKKWLFLSPSQCHLVFDRNLKGCVYNIFDDVSETD------FPGFKKTLW-LECTQEQNEIIFVPSGWYHQVHNLEDTISINHNWFNGYNLSWVWDLLLRDYNEAKEYIEDIRDICDDFEGLCQRNLAANTGMNXYDFFSFL-----SRFSLVN 689
            LKDWH  + +P +  Y+TP+ F  DWLN Y D   +                DYRFVYMG KGSWTP HADVFRSYSWSAN+CG+KKWL   P Q     +  L+ C  N+  DV+         +  F++    LE  QE  EIIFVPSGW+HQV+NLEDTISINHNW NG NL  +W  L  + +  +  IE+ RD  D +   CQ  + + TG++  +F SFL     +R S +N
Sbjct:  133 LKDWHMQRNFPEHNIYKTPIYFSSDWLNEYWDTIEV---------------DDYRFVYMGPKGSWTPFHADVFRSYSWSANICGRKKWLLYPPGQ-----EDFLRDCHGNLAYDVTAPILQDKGLYAQFEEACQPLEIIQEAGEIIFVPSGWHHQVYNLEDTISINHNWLNGCNLDIMWQFLQDELSSVQREIEEWRDTMDTWHQHCQVIMKSCTGIDYAEFASFLKTIANNRISFLN 350          
BLAST of EY664865 vs. ExPASy Swiss-Prot
Match: JMJD4_CHICK (JmjC domain-containing protein 4 OS=Gallus gallus GN=JMJD4 PE=2 SV=1)

HSP 1 Score: 194.126 bits (492), Expect = 9.560e-49
Identity = 101/237 (42.62%), Postives = 138/237 (58.23%), Query Frame = 3
Query:   12 LKDWHFAKEYPXYVAYRTPLIFCDDWLNMYLDHYRLHKDPESYQKDNDMCCSDYRFVYMGAKGSWTPLHADVFRSYSWSANVCGKKKWLFLSPSQCHLVFDRNLKGCVYNIFDDVS------ETDFPGFKKTLW-LECTQEQNEIIFVPSGWYHQVHNLEDTISINHNWFNGYNLSWVWDLLLRDYNEAKEYIEDIRDICDDFEGLCQRNLAANTGMNXYDFFSFLSRFSLVNVVIL 701
            LKDWH ++ +P    Y TP+ F  DWLN Y D                +   DYRFVYMG KGSWTP HADVFRSYSWSAN+CG+KKWL   P Q     +  LK C  N+  DV+       + +P + ++   +E  QE  EI+F+PSGW+HQV+NLEDTISINHNW NG N++ +W  L  +    +  I + +D  DD+   CQ  + + TG++  +F++FL   +   + IL
Sbjct:  135 LKDWHLSRAFPEQDVYTTPVYFSSDWLNEYWDA---------------IAVDDYRFVYMGPKGSWTPFHADVFRSYSWSANICGRKKWLLYPPGQ-----EDYLKDCHGNLPFDVTAPGLQDRSVYPRYNQSQPPVEIVQEAGEIVFIPSGWHHQVYNLEDTISINHNWVNGCNVAIMWCFLQDELAAVQREINEWKDPMDDWHLQCQLIMKSCTGIDYKEFYNFLKVIAENRISIL 351          
BLAST of EY664865 vs. ExPASy Swiss-Prot
Match: JMJD4_HUMAN (JmjC domain-containing protein 4 OS=Homo sapiens GN=JMJD4 PE=2 SV=2)

HSP 1 Score: 181.8 bits (460), Expect = 4.910e-45
Identity = 92/233 (39.48%), Postives = 133/233 (57.08%), Query Frame = 3
Query:   12 LKDWHFAKEYPXYVAYRTPLIFCDDWLNMYLDHYRLHKDPESYQKDNDMCCSDYRFVYMGAKGSWTPLHADVFRSYSWSANVCGKKKWLFLSPSQCHLVFDRNLKGCVYNIFDD-VSETDFPGFKKTLW--LECTQEQNEIIFVPSGWYHQVHNLEDTISINHNWFNGYNLSWVWDLLLRDYNEAKEYIEDIRDICDDFEGLCQRNLAANTGMNXYDFFSFLSRFSLVNVVIL 701
            LKDWH  +++P    +  P+ F  DWLN + D   +                DYRFVY G  GSW+P HAD+FRS+SWS NVCG+KKWL   P Q   + DR+     Y++    + +T      +     LE TQE  E++FVPSGW+HQVHNL+DTISINHNW NG+NL+ +W  L ++    +E + + RD   D+   CQ  + + +G+N  +F+ FL   +   +++L
Sbjct:  182 LKDWHLCRDFPVEDVFTLPVYFSSDWLNEFWDALDV---------------DDYRFVYAGPAGSWSPFHADIFRSFSWSVNVCGRKKWLLFPPGQEEALRDRH-GNLPYDVTSPALCDTHLHPRNQLAGPPLEITQEAGEMVFVPSGWHHQVHNLDDTISINHNWVNGFNLANMWRFLQQELCAVQEEVSEWRDSMPDWHHHCQVIMRSCSGINFEEFYHFLKVIAEKRLLVL 398          
BLAST of EY664865 vs. ExPASy Swiss-Prot
Match: JMJD4_MOUSE (JmjC domain-containing protein 4 OS=Mus musculus GN=Jmjd4 PE=2 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 2.063e-43
Identity = 91/240 (37.92%), Postives = 135/240 (56.25%), Query Frame = 3
Query:   12 LKDWHFAKEY---PXYVAYRTPLIFCDDWLNMYLDHYRLHKDPESYQKDNDMCCSDYRFVYMGAKGSWTPLHADVFRSYSWSANVCGKKKWLFLSPSQCHLVFDRNLKGCVYNIFDDVSETD------FPGFKK-TLWLECTQEQNEIIFVPSGWYHQVHNLEDTISINHNWFNGYNLSWVWDLLLRDYNEAKEYIEDIRDICDDFEGLCQRNLAANTGMNXYDFFSFLSRFSLVNVVIL 701
            LKDWH  ++         +  P+ F  DWLN + D   +                DYRFVY G +G+W+P HAD+FRS+SWS N+CGKKKWLF  P +     +  L+ C  N+  DV+ T+      +P  +  +L +E  QE  E++FVPSGW+HQV+NL+DTISINHNW NG NL  +W  L ++    +  +E+ +D   D+   CQ  + + TG+N  +F+ FL   +   +++L
Sbjct:  138 LKDWHLCRDSLVNDLEDIFTLPVYFSSDWLNEFWDVLNV---------------DDYRFVYAGPRGTWSPFHADIFRSFSWSVNICGKKKWLFFPPGE-----EEALRDCHGNLPYDVTSTELLDTHLYPKIQHHSLPIEVIQEPGEMVFVPSGWHHQVYNLDDTISINHNWVNGCNLPNMWHFLQQELQAVQHEVEEWKDSMPDWHHHCQVIMKSCTGINFEEFYHFLKVIAEKRLLVL 357          
BLAST of EY664865 vs. ExPASy Swiss-Prot
Match: JMJD4_DROME (JmjC domain-containing protein 4 homolog OS=Drosophila melanogaster GN=CG7200 PE=2 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 3.890e-42
Identity = 93/219 (42.47%), Postives = 117/219 (53.42%), Query Frame = 3
Query:   12 LKDWHFAKEYPXYVAYRTPLIFCDDWLNMYLDHYRLHKDPESYQKDNDMCCSDYRFVYMGAKGSWTPLHADVFRSYSWSANVCGKKKWLFLSPSQCHLVFDRNLKGCVYNIFDDVSETDFPGFKKTLWLECTQEQNEIIFVPSGWYHQVHNLEDTISINHNWFNGYNLSWVWDLLLRDYNEAKEYIEDIRDICDDFEGLCQRNLAANTGMNXYDFFSFL 668
            LKDWH A + P Y  Y+ P  F  DWLN  L            Q+  D    DYRFVYMG K SWT  HADVF S+SWS N+ G KKWL + P +  L  +  L    ++I + + +          +    Q  NE +FVPSGW+HQV NL DTIS+NHNWFNG N+S VW  L  +       I D + + D+FE  CQ  L A+ G+N  DF   L
Sbjct:  159 LKDWHLAAQMPGYNFYKVPKYFASDWLNEQL-----------IQQGKD----DYRFVYMGPKNSWTSYHADVFGSFSWSTNIVGLKKWLIMPPGE-ELKLNDRLGNLPFSIDEKMLDEH-----NVRYYTINQRANEAVFVPSGWFHQVWNLTDTISVNHNWFNGCNISMVWQNLKNNLKAVCNEISDCQQM-DNFEAHCQTMLRASFGINYLDFIELL 355          
BLAST of EY664865 vs. ExPASy Swiss-Prot
Match: JMJ1_SCHPO (JmjC domain-containing protein 1 OS=Schizosaccharomyces pombe GN=jmj1 PE=2 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 3.097e-23
Identity = 67/193 (34.72%), Postives = 96/193 (49.74%), Query Frame = 3
Query:   15 KDWHFAKEY-PXYVAYRTPLIFCDDWLNMYLDHYRLHKDPESYQKDNDMCCSDYRFVYMGAKGSWTPLHADVFRSYSWSANVCGKKKWLFLSPSQCHLVF----DRNLKGCVYNIFDDVSETDFPGFKKTLWLECTQEQNEIIFVPSGWYHQVHNLEDTISINHNWFNGYNLSWVWDLLLRDYNEAKEYIEDI 578
            KD H  +   P    Y TP IF DDWLN Y+       D ES          D+RF Y+G+  + T LH DV+ S+S+S N+CG K WLF+ P     +     D+ L   +    DD+        +  + +   Q   + +FVPSGWYHQV N+  T+SINHNW N   +  ++  L   Y  + E ++D+
Sbjct:  185 KDMHLFRHLDPADFPYSTPDIFADDWLNAYVI------DCES---------DDFRFAYLGSHLTTTGLHTDVYASHSFSVNLCGVKCWLFIDPKDLQTIASLYDDQQLPSWITK--DDLFRGPLVNHRHLIKI-LFQYPGQTVFVPSGWYHQVLNIGTTLSINHNWCNASCILQMYTALKEQYEVSAESLKDL 359          
BLAST of EY664865 vs. ExPASy Swiss-Prot
Match: FB252_ARATH (F-box protein At5g06550 OS=Arabidopsis thaliana GN=At5g06550 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 4.195e-12
Identity = 45/150 (30.00%), Postives = 74/150 (49.33%), Query Frame = 3
Query:  168 DYRFVYMGAKGSWTPLHADVFRSYSWSANVCGKKKWLFL-----------SPSQCHLVFDRNLKGCVYNIFDDVSETDFPGFKKTLWLECTQEQNEIIFVPSGWYHQVHNLEDTISINHNWFNGYNLSWVWDLLLRDYNEAKEYIEDIRD 584
            DYR++ +G  GS +  H D   + +W+A + G KKW+             SP    +    ++     N +DD  + +    KK +  EC  +  E++FVP+GW+H V NLE++I+I  N+ +  NL  V + L +    AKE +    D
Sbjct:  308 DYRWIIIGPAGSGSSFHIDPNSTSAWNAVITGSKKWVLFPPDVVPPGVHPSPDGAEVACPVSIIEWFMNFYDDTKDWE----KKPI--ECICKAGEVMFVPNGWWHLVINLEESIAITQNYASRSNLLNVLEFLKKP--NAKELVSGTTD 449          
The following BLAST results are available for this feature:
BLAST of EY664865 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
JMJD4_DANRE2.972e-5044.96JmjC domain-containing protein 4 OS=Danio rerio GN... [more]
JMJD4_CHICK9.560e-4942.62JmjC domain-containing protein 4 OS=Gallus gallus ... [more]
JMJD4_HUMAN4.910e-4539.48JmjC domain-containing protein 4 OS=Homo sapiens G... [more]
JMJD4_MOUSE2.063e-4337.92JmjC domain-containing protein 4 OS=Mus musculus G... [more]
JMJD4_DROME3.890e-4242.47JmjC domain-containing protein 4 homolog OS=Drosop... [more]
JMJ1_SCHPO3.097e-2334.72JmjC domain-containing protein 1 OS=Schizosaccharo... [more]
FB252_ARATH4.195e-1230.00F-box protein At5g06550 OS=Arabidopsis thaliana GN... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-101-071-D03-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY664865 ID=EY664865; Name=EY664865; organism=Citrus sinensis; type=EST; length=940bp
CCACGCGTCCGCTGAAAGACTGGCATTTTGCGAAGGAATACCCGNGATAT
GTAGCATACAGAACCCCGCTGATTTTTTGTGATGATTGGCTCAATATGTA
TCTGGACCATTATCGTTTGCATAAGGATCCTGAGTCTTATCAAAAGGATA
ATGATATGTGTTGTTCTGACTATCGTTTTGTTTATATGGGAGCCAAAGGA
TCCTGGACTCCTCTTCATGCTGATGTTTTCAGATCATATAGTTGGTCAGC
AAATGTGTGCGGGAAGAAAAAATGGCTTTTTCTATCTCCTTCTCAATGTC
ATCTTGTATTTGACAGAAACTTAAAAGGCTGTGTCTACAATATCTTTGAT
GATGTAAGTGAAACTGACTTTCCTGGTTTCAAGAAGACTCTCTGGTTGGA
ATGCACTCAAGAACAAAACGAGATCATATTTGTGCCCAGTGGGTGGTACC
ATCAAGTTCATAATCTGGAAGACACAATATCAATAAACCACAACTGGTTC
AATGGCTATAACCTTTCTTGGGTGTGGGATTTACTGTTGAGGGACTATAA
TGAGGCTAAGGAGTACATAGAGGACATAAGGGACATCTGTGATGATTTTG
AAGGTCTCTGTCAACGTAATCTTGCAGCTAACACAGGAATGAACNTTTAC
GATTTTTTTTCCTTCTTATCACGCTTCTCTTTGGTCAATGTGGTCATACT
TTTTCACCTACGCAGAGACTATGAGAATCAAATTTGGAGTTCATCCCCAG
TAGCTCGACACTTGGCATTGAATCTTGTATCTATACAGAAGATTGCATTG
AAAATGAAAAGTGTCAATGATTTGGNCTGGAAGTTTTGGATTTCTCATGT
ATTTAAAGGNAACTTTGGATGATCCCGAAATTTCTAATTGGGTTGGGTTT
CTGCAAACGTTTGGATGATCCCGAGGAGAAAATGGACTGT
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