EY664865
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY664865 vs. ExPASy Swiss-Prot
Match: JMJD4_DANRE (JmjC domain-containing protein 4 OS=Danio rerio GN=jmjd4 PE=2 SV=1) HSP 1 Score: 199.134 bits (505), Expect = 2.972e-50 Identity = 107/238 (44.96%), Postives = 137/238 (57.56%), Query Frame = 3 Query: 12 LKDWHFAKEYPXYVAYRTPLIFCDDWLNMYLDHYRLHKDPESYQKDNDMCCSDYRFVYMGAKGSWTPLHADVFRSYSWSANVCGKKKWLFLSPSQCHLVFDRNLKGCVYNIFDDVSETD------FPGFKKTLW-LECTQEQNEIIFVPSGWYHQVHNLEDTISINHNWFNGYNLSWVWDLLLRDYNEAKEYIEDIRDICDDFEGLCQRNLAANTGMNXYDFFSFL-----SRFSLVN 689 LKDWH + +P + Y+TP+ F DWLN Y D + DYRFVYMG KGSWTP HADVFRSYSWSAN+CG+KKWL P Q + L+ C N+ DV+ + F++ LE QE EIIFVPSGW+HQV+NLEDTISINHNW NG NL +W L + + + IE+ RD D + CQ + + TG++ +F SFL +R S +N Sbjct: 133 LKDWHMQRNFPEHNIYKTPIYFSSDWLNEYWDTIEV---------------DDYRFVYMGPKGSWTPFHADVFRSYSWSANICGRKKWLLYPPGQ-----EDFLRDCHGNLAYDVTAPILQDKGLYAQFEEACQPLEIIQEAGEIIFVPSGWHHQVYNLEDTISINHNWLNGCNLDIMWQFLQDELSSVQREIEEWRDTMDTWHQHCQVIMKSCTGIDYAEFASFLKTIANNRISFLN 350
BLAST of EY664865 vs. ExPASy Swiss-Prot
Match: JMJD4_CHICK (JmjC domain-containing protein 4 OS=Gallus gallus GN=JMJD4 PE=2 SV=1) HSP 1 Score: 194.126 bits (492), Expect = 9.560e-49 Identity = 101/237 (42.62%), Postives = 138/237 (58.23%), Query Frame = 3 Query: 12 LKDWHFAKEYPXYVAYRTPLIFCDDWLNMYLDHYRLHKDPESYQKDNDMCCSDYRFVYMGAKGSWTPLHADVFRSYSWSANVCGKKKWLFLSPSQCHLVFDRNLKGCVYNIFDDVS------ETDFPGFKKTLW-LECTQEQNEIIFVPSGWYHQVHNLEDTISINHNWFNGYNLSWVWDLLLRDYNEAKEYIEDIRDICDDFEGLCQRNLAANTGMNXYDFFSFLSRFSLVNVVIL 701 LKDWH ++ +P Y TP+ F DWLN Y D + DYRFVYMG KGSWTP HADVFRSYSWSAN+CG+KKWL P Q + LK C N+ DV+ + +P + ++ +E QE EI+F+PSGW+HQV+NLEDTISINHNW NG N++ +W L + + I + +D DD+ CQ + + TG++ +F++FL + + IL Sbjct: 135 LKDWHLSRAFPEQDVYTTPVYFSSDWLNEYWDA---------------IAVDDYRFVYMGPKGSWTPFHADVFRSYSWSANICGRKKWLLYPPGQ-----EDYLKDCHGNLPFDVTAPGLQDRSVYPRYNQSQPPVEIVQEAGEIVFIPSGWHHQVYNLEDTISINHNWVNGCNVAIMWCFLQDELAAVQREINEWKDPMDDWHLQCQLIMKSCTGIDYKEFYNFLKVIAENRISIL 351
BLAST of EY664865 vs. ExPASy Swiss-Prot
Match: JMJD4_HUMAN (JmjC domain-containing protein 4 OS=Homo sapiens GN=JMJD4 PE=2 SV=2) HSP 1 Score: 181.8 bits (460), Expect = 4.910e-45 Identity = 92/233 (39.48%), Postives = 133/233 (57.08%), Query Frame = 3 Query: 12 LKDWHFAKEYPXYVAYRTPLIFCDDWLNMYLDHYRLHKDPESYQKDNDMCCSDYRFVYMGAKGSWTPLHADVFRSYSWSANVCGKKKWLFLSPSQCHLVFDRNLKGCVYNIFDD-VSETDFPGFKKTLW--LECTQEQNEIIFVPSGWYHQVHNLEDTISINHNWFNGYNLSWVWDLLLRDYNEAKEYIEDIRDICDDFEGLCQRNLAANTGMNXYDFFSFLSRFSLVNVVIL 701 LKDWH +++P + P+ F DWLN + D + DYRFVY G GSW+P HAD+FRS+SWS NVCG+KKWL P Q + DR+ Y++ + +T + LE TQE E++FVPSGW+HQVHNL+DTISINHNW NG+NL+ +W L ++ +E + + RD D+ CQ + + +G+N +F+ FL + +++L Sbjct: 182 LKDWHLCRDFPVEDVFTLPVYFSSDWLNEFWDALDV---------------DDYRFVYAGPAGSWSPFHADIFRSFSWSVNVCGRKKWLLFPPGQEEALRDRH-GNLPYDVTSPALCDTHLHPRNQLAGPPLEITQEAGEMVFVPSGWHHQVHNLDDTISINHNWVNGFNLANMWRFLQQELCAVQEEVSEWRDSMPDWHHHCQVIMRSCSGINFEEFYHFLKVIAEKRLLVL 398
BLAST of EY664865 vs. ExPASy Swiss-Prot
Match: JMJD4_MOUSE (JmjC domain-containing protein 4 OS=Mus musculus GN=Jmjd4 PE=2 SV=1) HSP 1 Score: 176.407 bits (446), Expect = 2.063e-43 Identity = 91/240 (37.92%), Postives = 135/240 (56.25%), Query Frame = 3 Query: 12 LKDWHFAKEY---PXYVAYRTPLIFCDDWLNMYLDHYRLHKDPESYQKDNDMCCSDYRFVYMGAKGSWTPLHADVFRSYSWSANVCGKKKWLFLSPSQCHLVFDRNLKGCVYNIFDDVSETD------FPGFKK-TLWLECTQEQNEIIFVPSGWYHQVHNLEDTISINHNWFNGYNLSWVWDLLLRDYNEAKEYIEDIRDICDDFEGLCQRNLAANTGMNXYDFFSFLSRFSLVNVVIL 701 LKDWH ++ + P+ F DWLN + D + DYRFVY G +G+W+P HAD+FRS+SWS N+CGKKKWLF P + + L+ C N+ DV+ T+ +P + +L +E QE E++FVPSGW+HQV+NL+DTISINHNW NG NL +W L ++ + +E+ +D D+ CQ + + TG+N +F+ FL + +++L Sbjct: 138 LKDWHLCRDSLVNDLEDIFTLPVYFSSDWLNEFWDVLNV---------------DDYRFVYAGPRGTWSPFHADIFRSFSWSVNICGKKKWLFFPPGE-----EEALRDCHGNLPYDVTSTELLDTHLYPKIQHHSLPIEVIQEPGEMVFVPSGWHHQVYNLDDTISINHNWVNGCNLPNMWHFLQQELQAVQHEVEEWKDSMPDWHHHCQVIMKSCTGINFEEFYHFLKVIAEKRLLVL 357
BLAST of EY664865 vs. ExPASy Swiss-Prot
Match: JMJD4_DROME (JmjC domain-containing protein 4 homolog OS=Drosophila melanogaster GN=CG7200 PE=2 SV=1) HSP 1 Score: 172.17 bits (435), Expect = 3.890e-42 Identity = 93/219 (42.47%), Postives = 117/219 (53.42%), Query Frame = 3 Query: 12 LKDWHFAKEYPXYVAYRTPLIFCDDWLNMYLDHYRLHKDPESYQKDNDMCCSDYRFVYMGAKGSWTPLHADVFRSYSWSANVCGKKKWLFLSPSQCHLVFDRNLKGCVYNIFDDVSETDFPGFKKTLWLECTQEQNEIIFVPSGWYHQVHNLEDTISINHNWFNGYNLSWVWDLLLRDYNEAKEYIEDIRDICDDFEGLCQRNLAANTGMNXYDFFSFL 668 LKDWH A + P Y Y+ P F DWLN L Q+ D DYRFVYMG K SWT HADVF S+SWS N+ G KKWL + P + L + L ++I + + + + Q NE +FVPSGW+HQV NL DTIS+NHNWFNG N+S VW L + I D + + D+FE CQ L A+ G+N DF L Sbjct: 159 LKDWHLAAQMPGYNFYKVPKYFASDWLNEQL-----------IQQGKD----DYRFVYMGPKNSWTSYHADVFGSFSWSTNIVGLKKWLIMPPGE-ELKLNDRLGNLPFSIDEKMLDEH-----NVRYYTINQRANEAVFVPSGWFHQVWNLTDTISVNHNWFNGCNISMVWQNLKNNLKAVCNEISDCQQM-DNFEAHCQTMLRASFGINYLDFIELL 355
BLAST of EY664865 vs. ExPASy Swiss-Prot
Match: JMJ1_SCHPO (JmjC domain-containing protein 1 OS=Schizosaccharomyces pombe GN=jmj1 PE=2 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 3.097e-23 Identity = 67/193 (34.72%), Postives = 96/193 (49.74%), Query Frame = 3 Query: 15 KDWHFAKEY-PXYVAYRTPLIFCDDWLNMYLDHYRLHKDPESYQKDNDMCCSDYRFVYMGAKGSWTPLHADVFRSYSWSANVCGKKKWLFLSPSQCHLVF----DRNLKGCVYNIFDDVSETDFPGFKKTLWLECTQEQNEIIFVPSGWYHQVHNLEDTISINHNWFNGYNLSWVWDLLLRDYNEAKEYIEDI 578 KD H + P Y TP IF DDWLN Y+ D ES D+RF Y+G+ + T LH DV+ S+S+S N+CG K WLF+ P + D+ L + DD+ + + + Q + +FVPSGWYHQV N+ T+SINHNW N + ++ L Y + E ++D+ Sbjct: 185 KDMHLFRHLDPADFPYSTPDIFADDWLNAYVI------DCES---------DDFRFAYLGSHLTTTGLHTDVYASHSFSVNLCGVKCWLFIDPKDLQTIASLYDDQQLPSWITK--DDLFRGPLVNHRHLIKI-LFQYPGQTVFVPSGWYHQVLNIGTTLSINHNWCNASCILQMYTALKEQYEVSAESLKDL 359
BLAST of EY664865 vs. ExPASy Swiss-Prot
Match: FB252_ARATH (F-box protein At5g06550 OS=Arabidopsis thaliana GN=At5g06550 PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 4.195e-12 Identity = 45/150 (30.00%), Postives = 74/150 (49.33%), Query Frame = 3 Query: 168 DYRFVYMGAKGSWTPLHADVFRSYSWSANVCGKKKWLFL-----------SPSQCHLVFDRNLKGCVYNIFDDVSETDFPGFKKTLWLECTQEQNEIIFVPSGWYHQVHNLEDTISINHNWFNGYNLSWVWDLLLRDYNEAKEYIEDIRD 584 DYR++ +G GS + H D + +W+A + G KKW+ SP + ++ N +DD + + KK + EC + E++FVP+GW+H V NLE++I+I N+ + NL V + L + AKE + D Sbjct: 308 DYRWIIIGPAGSGSSFHIDPNSTSAWNAVITGSKKWVLFPPDVVPPGVHPSPDGAEVACPVSIIEWFMNFYDDTKDWE----KKPI--ECICKAGEVMFVPNGWWHLVINLEESIAITQNYASRSNLLNVLEFLKKP--NAKELVSGTTD 449 The following BLAST results are available for this feature:
BLAST of EY664865 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY664865 ID=EY664865; Name=EY664865; organism=Citrus sinensis; type=EST; length=940bpback to top |