EY664828

Overview
NameEY664828
Unique NameEY664828
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length689
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5426 contig Csv1_Contig5426:1019..1707. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY664828 vs. ExPASy Swiss-Prot
Match: MSSP2_ARATH (Monosaccharide-sensing protein 2 OS=Arabidopsis thaliana GN=MSSP2 PE=2 SV=2)

HSP 1 Score: 190.274 bits (482), Expect = 8.352e-48
Identity = 86/117 (73.50%), Postives = 103/117 (88.03%), Query Frame = 1
Query:   40 ILKSRISTARVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLSSIGLAGAFGVYAVVCFISWVFVFLRVPETKGMPLEVITEFFAVGARQATKA 390
            I+ + +ST  V++YFC FV  +GP PNILC+EIFPT+VRGICIAICA+ +WICDIIVTY+LPV+L SIGLAG FG+YA+VC ISWVFVF++VPETKGMPLEVITEFF+VGARQA  A
Sbjct:  610 IVHAVLSTVSVVLYFCFFVMGFGPAPNILCSEIFPTRVRGICIAICALTFWICDIIVTYSLPVLLKSIGLAGVFGMYAIVCCISWVFVFIKVPETKGMPLEVITEFFSVGARQAEAA 726          
BLAST of EY664828 vs. ExPASy Swiss-Prot
Match: MSSP3_ARATH (Monosaccharide-sensing protein 3 OS=Arabidopsis thaliana GN=MSSP3 PE=2 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 5.067e-45
Identity = 80/116 (68.97%), Postives = 98/116 (84.48%), Query Frame = 1
Query:   43 LKSRISTARVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLSSIGLAGAFGVYAVVCFISWVFVFLRVPETKGMPLEVITEFFAVGARQATKA 390
            + + ISTA V +Y  CFV  +G IPNILC+EIFPT VRG+CI ICA+ +WICDIIVTYTLPVML SIG+AG FG+YA+VC ++WVFV+L+VPETKGMPLEVI+EFF+VGA+Q   A
Sbjct:  607 INALISTASVTVYLSCFVMGFGAIPNILCSEIFPTSVRGLCITICALTFWICDIIVTYTLPVMLKSIGIAGVFGIYAIVCAVAWVFVYLKVPETKGMPLEVISEFFSVGAKQQDAA 722          
BLAST of EY664828 vs. ExPASy Swiss-Prot
Match: MSSP1_ARATH (Monosaccharide-sensing protein 1 OS=Arabidopsis thaliana GN=MSSP1 PE=1 SV=2)

HSP 1 Score: 177.563 bits (449), Expect = 5.602e-44
Identity = 78/117 (66.67%), Postives = 98/117 (83.76%), Query Frame = 1
Query:   40 ILKSRISTARVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLSSIGLAGAFGVYAVVCFISWVFVFLRVPETKGMPLEVITEFFAVGARQATKA 390
            ++ + +ST  V++YFC FV  YGPIPNILC+EIFPT+VRG+CIAICAM +WI DIIVTY+LPV+LSSIGL G F +YA VC ISW+FV+++VPETKGMPLEVIT++FA GA+    A
Sbjct:  613 VVNAALSTGCVVLYFCFFVMGYGPIPNILCSEIFPTRVRGLCIAICAMVFWIGDIIVTYSLPVLLSSIGLVGVFSIYAAVCVISWIFVYMKVPETKGMPLEVITDYFAFGAQAQASA 729          
BLAST of EY664828 vs. ExPASy Swiss-Prot
Match: CSBC_BACSU (Probable metabolite transport protein csbC OS=Bacillus subtilis GN=csbC PE=1 SV=3)

HSP 1 Score: 77.0258 bits (188), Expect = 1.030e-13
Identity = 35/91 (38.46%), Postives = 55/91 (60.44%), Query Frame = 1
Query:   76 IYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLSSIGLAGAFGVYAVVCFISWVFVFLRVPETKGMPLEVI 348
            +Y   + A +GP+  +L  E+FP+K RG       +     ++IV+   P+MLS++G+A  F V++V+C +S+ F F  VPETKG  LE I
Sbjct:  347 VYIVFYQATWGPVVWVLMPELFPSKARGAATGFTTLVLSAANLIVSLVFPLMLSAMGIAWVFMVFSVICLLSFFFAFYMVPETKGKSLEEI 437          
BLAST of EY664828 vs. ExPASy Swiss-Prot
Match: GTR6_HUMAN (Solute carrier family 2, facilitated glucose transporter member 6 OS=Homo sapiens GN=SLC2A6 PE=1 SV=2)

HSP 1 Score: 75.0998 bits (183), Expect = 3.916e-13
Identity = 34/101 (33.66%), Postives = 56/101 (55.45%), Query Frame = 1
Query:   73 IIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLSSIGLAGAFGVYAVVCFISWVFVFLRVPETKGMPLEVITEFFAVGAR 375
            +++   +   +GPI  +L +E+ P + RG+   +C +A W+   ++T +   ++S+ GL   F  +A +C +S VF    VPETKG  LE I  FF  G R
Sbjct:  403 MLFIMGYAVGWGPITWLLMSEVLPLRARGVASGLCVLASWLTAFVLTKSFLPVVSTFGLQVPFFFFAAICLVSLVFTGCCVPETKGRSLEQIESFFRTGRR 503          
BLAST of EY664828 vs. ExPASy Swiss-Prot
Match: INT2_ARATH (Probable inositol transporter 2 OS=Arabidopsis thaliana GN=INT2 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.488e-12
Identity = 36/91 (39.56%), Postives = 55/91 (60.44%), Query Frame = 1
Query:   76 IYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLSSIGLAGAFGVYAVVCFISWVFVFLRVPETKGMPLEVI 348
            +Y   F    G +P I+ +EI+P + RGIC  I A A WI ++IV  +   +  +IG +  F ++ V+  I+ +FV + VPETKGMP+E I
Sbjct:  462 LYIIFFSPGMGTVPWIVNSEIYPLRFRGICGGIAATANWISNLIVAQSFLSLTEAIGTSWTFLIFGVISVIALLFVMVCVPETKGMPMEEI 552          
BLAST of EY664828 vs. ExPASy Swiss-Prot
Match: GTR8_HUMAN (Solute carrier family 2, facilitated glucose transporter member 8 OS=Homo sapiens GN=SLC2A8 PE=2 SV=3)

HSP 1 Score: 72.0182 bits (175), Expect = 3.315e-12
Identity = 38/117 (32.48%), Postives = 58/117 (49.57%), Query Frame = 1
Query:   22 PTRPQPILKSR----ISTARVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLSSIGLAGAFGVYAVVCFISWVFVFLRVPETKGMPLEVITEFF 360
            P   QP+  S     ++   + ++   F   +GPIP +L +EIFP  V+G+   IC +  W+   +VT     ++  +   GAF + +  C  S +F    VPETKG  LE IT  F
Sbjct:  358 PVSAQPVDASVGLAWLAVGSMCLFIAGFAVGWGPIPWLLMSEIFPLHVKGVATGICVLTNWLMAFLVTKEFSSLMEVLRPYGAFWLASAFCIFSVLFTLFCVPETKGKTLEQITAHF 474          
BLAST of EY664828 vs. ExPASy Swiss-Prot
Match: GTR8_MOUSE (Solute carrier family 2, facilitated glucose transporter member 8 OS=Mus musculus GN=Slc2a8 PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 5.654e-12
Identity = 34/102 (33.33%), Postives = 53/102 (51.96%), Query Frame = 1
Query:   55 ISTARVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLSSIGLAGAFGVYAVVCFISWVFVFLRVPETKGMPLEVITEFF 360
            ++   + ++   F   +GPIP +L +EIFP  V+G+   IC +  W    +VT     ++  +   GAF + A  C +S +F    VPETKG  LE +T  F
Sbjct:  373 LAVGSMCLFIAGFAVGWGPIPWLLMSEIFPLHVKGVATGICVLTNWFMAFLVTKEFSSVMEMLRPYGAFWLTAAFCALSVLFTLTVVPETKGRTLEQVTAHF 474          
BLAST of EY664828 vs. ExPASy Swiss-Prot
Match: GTR8_RAT (Solute carrier family 2, facilitated glucose transporter member 8 OS=Rattus norvegicus GN=Slc2a8 PE=1 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 7.385e-12
Identity = 33/102 (32.35%), Postives = 53/102 (51.96%), Query Frame = 1
Query:   55 ISTARVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLSSIGLAGAFGVYAVVCFISWVFVFLRVPETKGMPLEVITEFF 360
            ++   + ++   F   +GPIP +L +EIFP  ++G+   +C +  W    +VT     ++  +   GAF + A  C +S +F    VPETKG  LE IT  F
Sbjct:  374 LAVGSMCLFIAGFAVGWGPIPWLLMSEIFPLHIKGVATGVCVLTNWFMAFLVTKEFNSIMEILRPYGAFWLTAAFCILSVLFTLTFVPETKGRTLEQITAHF 475          
BLAST of EY664828 vs. ExPASy Swiss-Prot
Match: GTR10_MOUSE (Solute carrier family 2, facilitated glucose transporter member 10 OS=Mus musculus GN=Slc2a10 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 7.385e-12
Identity = 34/119 (28.57%), Postives = 63/119 (52.94%), Query Frame = 1
Query:   16 ARPTRPQPILKSRI----STARVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLSSIGLAGAFGVYAVVCFISWVFVFLRVPETKGMPLEVITEFF 360
            A P    PIL+  +    +   +++Y   F   +GP+  ++ +EI+P ++RG   A C+   W  ++ ++ +   ++ +IGLA  F +Y +   +   F++L VPETKG  L  I + F
Sbjct:  390 ASPVPTSPILEHTLLCWSALVCMMVYVSAFSVGFGPVTWLVLSEIYPAEIRGRAFAFCSSFNWAANLFISLSFLDLIGAIGLAWTFLLYGLTAVLGLAFIYLLVPETKGQSLAEIEQQF 508          
The following BLAST results are available for this feature:
BLAST of EY664828 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 17
Match NameE-valueIdentityDescription
MSSP2_ARATH8.352e-4873.50Monosaccharide-sensing protein 2 OS=Arabidopsis th... [more]
MSSP3_ARATH5.067e-4568.97Monosaccharide-sensing protein 3 OS=Arabidopsis th... [more]
MSSP1_ARATH5.602e-4466.67Monosaccharide-sensing protein 1 OS=Arabidopsis th... [more]
CSBC_BACSU1.030e-1338.46Probable metabolite transport protein csbC OS=Baci... [more]
GTR6_HUMAN3.916e-1333.66Solute carrier family 2, facilitated glucose trans... [more]
INT2_ARATH1.488e-1239.56Probable inositol transporter 2 OS=Arabidopsis tha... [more]
GTR8_HUMAN3.315e-1232.48Solute carrier family 2, facilitated glucose trans... [more]
GTR8_MOUSE5.654e-1233.33Solute carrier family 2, facilitated glucose trans... [more]
GTR8_RAT7.385e-1232.35Solute carrier family 2, facilitated glucose trans... [more]
GTR10_MOUSE7.385e-1228.57Solute carrier family 2, facilitated glucose trans... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-101-070-H10-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY664828 ID=EY664828; Name=EY664828; organism=Citrus sinensis; type=EST; length=689bp
CGGTCCGNATTACACGCTCGACCCACGCGTCCGCAGCCCATTCTTAAAAG
CAGGATCTCAACAGCTCGTGTTATAATCTACTTCTGCTGCTTTGTTGCGG
CTTATGGACCAATTCCAAATATCCTTTGTGCAGAGATCTTCCCAACAAAA
GTCCGTGGCATCTGCATTGCCATCTGTGCCATGGCTTACTGGATTTGTGA
CATCATTGTCACCTACACACTGCCTGTAATGCTTAGTTCAATAGGGCTAG
CTGGTGCCTTCGGTGTTTATGCTGTTGTGTGTTTCATCTCCTGGGTTTTC
GTCTTCCTGAGAGTACCTGAAACCAAAGGCATGCCTCTTGAAGTCATTAC
TGAGTTCTTTGCTGTTGGGGCAAGGCAAGCCACCAAGGCTGACTAATCGA
AAACTGAGAATGGCTTTCAGCTTAGCCGGCAGAATTAGCTCATACTTTCA
TTTGGAGAATTTTTGCACAGTGCATTGGGAATCAGGATATTCTAATTAAA
AGAGGTTGTGGCTCTTTCTTTTTTTTTTCCTCTCCGAAATGCATTTTTAG
TATTATATTGTCAATATTGTTTCAAATACATTTGCTCTACTTATTTGATT
TATGAAATATCTTATTAGTGACTACTGAAGCTTCTTTAATACCATATTGT
ATAATGGTTTCATTGAAAAAAAAAAAAAAAAAAAAAAAA
back to top