EY664826

Overview
NameEY664826
Unique NameEY664826
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length934
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY664826 vs. ExPASy Swiss-Prot
Match: CAF2P_ARATH (CRS2-associated factor 2, chloroplastic OS=Arabidopsis thaliana GN=At1g23400 PE=2 SV=1)

HSP 1 Score: 218.394 bits (555), Expect = 4.685e-56
Identity = 115/217 (53.00%), Postives = 151/217 (69.59%), Query Frame = 3
Query:  243 AKNGVYLTLVRDVRNAFEGSSLVKVNCKGMHASDYKKLGAKLKELVPCVLLSFDDEQILMWRGKDWKSMYPEPPSFSNPVDLDIAGDADGSRTPSDD---PSQGTIRSSPKMISLWKRAIESTKALVLDEINLGPDDLLKKVEEFEGISQAAEHSYPALVLSREDGASSSMAEYEDGSQSENYDEDEFYPGXXXXXXXXXXXXXXXXVVPLGSLPCD 884
            +KNGVY++LV+DVR+AFE SSLVKV+C G+  SDYKK+GAKLKELVPCVLLSFDDEQILMWRG++WKS + + P   +  + +   + D S  PS++    +  T  SSPKMISLW+RA+ES+KA++L+E++LGPDDLLKKVEE EG S AAEH+Y A+VLS  DGA+    + +D S+    D D+ +                  V P+GSLP D
Sbjct:  343 SKNGVYVSLVKDVRDAFELSSLVKVDCPGLEPSDYKKIGAKLKELVPCVLLSFDDEQILMWRGREWKSRFVDNPLIPSLSETNTTNELDPSDKPSEEQTVANPSTTISSPKMISLWQRALESSKAVILEELDLGPDDLLKKVEELEGTSLAAEHTYTAMVLSNTDGAAEDYVDEKDRSEEYYSDIDDDF------DDECSDDESLDPVGPVGSLPVD 553          
BLAST of EY664826 vs. ExPASy Swiss-Prot
Match: CAF2P_MAIZE (CRS2-associated factor 2, chloroplastic OS=Zea mays GN=CAF2 PE=1 SV=1)

HSP 1 Score: 183.341 bits (464), Expect = 1.670e-45
Identity = 112/237 (47.26%), Postives = 147/237 (62.03%), Query Frame = 3
Query:  243 AKNGVYLTLVRDVRNAFEGSSLVKVNCKGMHASDYKKLGAKLKELVPCVLLSFDDEQILMWRGKDWKSMYPEPPSFSNPV---DLDIAGDADGSRTPSDDPSQGTIRS--SPKMISLWKRAIESTKALVLDEI---NLGPDDLLKKVEEFEGISQAAEHSYPALVLSREDGASSSM-AEY------------EDG--SQSENYDEDEFYPGXXXXXXXXXXXXXXXXVVPLGSLPCD 884
            AKNG+Y+TLV+DVR+AFEGS LVK++C+G++ SDYKK+GAKL++LVPCVLLSFDDEQILM RGK+WKS Y +P +    V   +L +    + S   SD  +Q  IR    PKM  LWK A++S+ AL+LD+    NL PD LL  VEEF   SQA EHS+PAL+++  D ++ S+ AEY            E+G   QS +  +DE +                   VPLGSLP D
Sbjct:  374 AKNGIYITLVKDVRDAFEGSDLVKIDCEGLNPSDYKKIGAKLRDLVPCVLLSFDDEQILMHRGKEWKSRYSKPLTLIPKVPKNNLAMTSVMNSSDEVSDANTQVAIREVLRPKMFKLWKSAVDSSLALLLDDAEANNLTPDSLLTLVEEFSVTSQAVEHSFPALLVTNGDASTDSLSAEYMNDEPETSVAGNEEGQLEQSPDLRDDEHF--------DVDMFERLESSVPLGSLPID 602          
BLAST of EY664826 vs. ExPASy Swiss-Prot
Match: CAF2P_ORYSJ (CRS2-associated factor 2, chloroplastic OS=Oryza sativa subsp. japonica GN=Os01g0323300 PE=2 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 4.548e-43
Identity = 98/229 (42.79%), Postives = 141/229 (61.57%), Query Frame = 3
Query:  243 AKNGVYLTLVRDVRNAFEGSSLVKVNCKGMHASDYKKLGAKLKELVPCVLLSFDDEQILMWRGKDWKSMYPEPPSFSNPV---DLDIAGDADGSRTPSDDPSQGTIRS--SPKMISLWKRAIESTKALVLDEIN---LGPDDLLKKVEEFEGISQAAEHSYPALVLSREDGASSSM-AEYEDGS------QSENYDEDEFYPGXXXXXXXXXXXXXXXXVVPLGSLPCD 884
            AKNG+Y+ LVRDVR+AFEGS LVK++C+G++ SDYKK+GAKL++LVPCVLLSFD+EQILM+RGK+WKS YP+P +    +   ++ ++ D   S   +DD  +  +R    PKM  LW  AIES+ AL+LD+     L PD LL +VE+F   SQ  EHS+PA++++ ++     + AEY +        + + ++  E                     VPLG+LP D
Sbjct:  370 AKNGIYIYLVRDVRDAFEGSDLVKIDCEGLNPSDYKKIGAKLRDLVPCVLLSFDNEQILMFRGKEWKSRYPKPLTLIPKIRKNNVPMSSDESSSDEATDDDDRLAVREVLRPKMFELWTNAIESSVALMLDDAEVDALTPDSLLTRVEDFSVTSQVVEHSFPAVLVANDESNPDVLNAEYTEDEPETGTLEPQQHEFTESSDVAEDDHFEDDMLKRLESSVPLGALPID 598          
BLAST of EY664826 vs. ExPASy Swiss-Prot
Match: CAF1P_ARATH (CRS2-associated factor 1, chloroplastic OS=Arabidopsis thaliana GN=At2g20020 PE=1 SV=2)

HSP 1 Score: 104.76 bits (260), Expect = 7.550e-22
Identity = 52/114 (45.61%), Postives = 78/114 (68.42%), Query Frame = 3
Query:  246 KNGVYLTLVRDVRNAFEGSSLVKVNCKGMHASDYKKLGAKLKELVPCVLLSFDDEQILMWRGKDWKSMYPEPP---SFSNPVDLDIAGDADGSRTPSDDPSQGTIRSSPKMISL 578
            KNGVY  LV++V+ AFE   LV+++C+GM  SD++K+GAKLK+LVPCVL+SF++EQIL+WRG++WKS    P         +++D A   D   + S + SQ T+  +P + S+
Sbjct:  384 KNGVYCDLVKNVKEAFEVCELVRIDCQGMKGSDFRKIGAKLKDLVPCVLVSFENEQILIWRGREWKSSLTTPDKKGDILEDIEVDTALPEDDEPSVSPNQSQ-TMTQNPPLDSM 496          
BLAST of EY664826 vs. ExPASy Swiss-Prot
Match: CAF1P_ORYSJ (CRS2-associated factor 1, chloroplastic OS=Oryza sativa subsp. japonica GN=Os01g0495900 PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 6.391e-21
Identity = 46/70 (65.71%), Postives = 55/70 (78.57%), Query Frame = 3
Query:  246 KNGVYLTLVRDVRNAFEGSSLVKVNCKGMHASDYKKLGAKLKELVPCVLLSFDDEQILMWRGKDWKSMYP 455
            KNGVYL LV+ VR AFE   LV+V+C G++ SD +K+GAKLK+LVPC LLSF+ E ILMWRG DWKS  P
Sbjct:  326 KNGVYLNLVKQVREAFEACDLVRVDCSGLNKSDCRKIGAKLKDLVPCTLLSFEFEHILMWRGNDWKSSLP 395          
BLAST of EY664826 vs. ExPASy Swiss-Prot
Match: CAF1P_MAIZE (CRS2-associated factor 1, chloroplastic OS=Zea mays GN=CAF1 PE=1 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.860e-20
Identity = 45/70 (64.29%), Postives = 54/70 (77.14%), Query Frame = 3
Query:  246 KNGVYLTLVRDVRNAFEGSSLVKVNCKGMHASDYKKLGAKLKELVPCVLLSFDDEQILMWRGKDWKSMYP 455
            KNGVY  LV  VR AFE   LV+V+C G++ SD +K+GAKLK+LVPC+LLSF+ E ILMWRG DWKS  P
Sbjct:  326 KNGVYANLVNQVREAFEACDLVRVDCSGLNKSDCRKIGAKLKDLVPCILLSFEFEHILMWRGSDWKSSLP 395          
BLAST of EY664826 vs. ExPASy Swiss-Prot
Match: CAF1M_ARATH (CRS2-associated factor 1, mitochondrial OS=Arabidopsis thaliana GN=At4g31010 PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 5.064e-18
Identity = 50/107 (46.73%), Postives = 70/107 (65.42%), Query Frame = 3
Query:  243 AKNGVYLTLVRDVRNAFEGSSLVKVNCKGMHASDYKKLGAKLKELVPCVLLSFDDEQILMWRGKDWK--SMYPEPPSF---SNPVDLDIAGDADGSRTPSDDPSQGT 548
            AKNG Y +LV  VR+AF  S LV+++C G+   DYKK+GAKL++LVPC+L++FD EQ+++WRGKD+K      E  SF    + +D D+  D   SR   D P + T
Sbjct:  301 AKNGYYGSLVPMVRDAFLVSELVRIDCLGLERKDYKKIGAKLRDLVPCILVTFDKEQVVIWRGKDYKPPKEDDEYSSFIHRESSIDSDV--DLSCSRGAQDSPDETT 405          
BLAST of EY664826 vs. ExPASy Swiss-Prot
Match: CAF1M_ORYSJ (CRS2-associated factor 1, mitochondrial OS=Oryza sativa subsp. japonica GN=Os08g0174900 PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 4.740e-16
Identity = 37/66 (56.06%), Postives = 53/66 (80.30%), Query Frame = 3
Query:  243 AKNGVYLTLVRDVRNAFEGSSLVKVNCKGMHASDYKKLGAKLKELVPCVLLSFDDEQILMWRGKDW 440
            AKNG Y +LV  VR+AF    LV+++ KG+  SDY+K+G KL++LVPC+++SFD EQI++WRGKD+
Sbjct:  299 AKNGYYASLVPMVRDAFLTDELVRIDSKGLPKSDYRKIGVKLRDLVPCIIVSFDKEQIIVWRGKDY 364          
BLAST of EY664826 vs. ExPASy Swiss-Prot
Match: CAF2M_ORYSJ (CRS2-associated factor 2, mitochondrial OS=Oryza sativa subsp. japonica GN=Os08g0188000 PE=2 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 1.093e-12
Identity = 33/63 (52.38%), Postives = 48/63 (76.19%), Query Frame = 3
Query:  246 KNGVYLTLVRDVRNAFEGSSLVKVNCKGMHASDYKKLGAKLKELVPCVLLSFDDEQILMWRGK 434
            +NGVY+ +V  VR AF+   +V+++C  + +SD KK+G KL++LVPCV L F DEQI++WRGK
Sbjct:  288 RNGVYVNVVDRVREAFKTVEVVRLDCSHVGSSDCKKIGVKLRDLVPCVPLLFKDEQIILWRGK 350          
BLAST of EY664826 vs. ExPASy Swiss-Prot
Match: CAF2M_ARATH (CRS2-associated factor 2, mitochondrial OS=Arabidopsis thaliana GN=At5g54890 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.864e-12
Identity = 32/63 (50.79%), Postives = 46/63 (73.02%), Query Frame = 3
Query:  246 KNGVYLTLVRDVRNAFEGSSLVKVNCKGMHASDYKKLGAKLKELVPCVLLSFDDEQILMWRGK 434
            +NGVY+ +V  VR  FE   +V+++C  +  SD K++G KLKE+VPCV + F DEQI++WRGK
Sbjct:  286 RNGVYVNVVGRVREEFETEEIVRLDCTHVGMSDCKRIGVKLKEMVPCVPILFKDEQIILWRGK 348          
The following BLAST results are available for this feature:
BLAST of EY664826 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 10
Match NameE-valueIdentityDescription
CAF2P_ARATH4.685e-5653.00CRS2-associated factor 2, chloroplastic OS=Arabido... [more]
CAF2P_MAIZE1.670e-4547.26CRS2-associated factor 2, chloroplastic OS=Zea may... [more]
CAF2P_ORYSJ4.548e-4342.79CRS2-associated factor 2, chloroplastic OS=Oryza s... [more]
CAF1P_ARATH7.550e-2245.61CRS2-associated factor 1, chloroplastic OS=Arabido... [more]
CAF1P_ORYSJ6.391e-2165.71CRS2-associated factor 1, chloroplastic OS=Oryza s... [more]
CAF1P_MAIZE1.860e-2064.29CRS2-associated factor 1, chloroplastic OS=Zea may... [more]
CAF1M_ARATH5.064e-1846.73CRS2-associated factor 1, mitochondrial OS=Arabido... [more]
CAF1M_ORYSJ4.740e-1656.06CRS2-associated factor 1, mitochondrial OS=Oryza s... [more]
CAF2M_ORYSJ1.093e-1252.38CRS2-associated factor 2, mitochondrial OS=Oryza s... [more]
CAF2M_ARATH1.864e-1250.79CRS2-associated factor 2, mitochondrial OS=Arabido... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-101-070-H08-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY664826 ID=EY664826; Name=EY664826; organism=Citrus sinensis; type=EST; length=934bp
ATTCAAAGCCCCGACCCACGCGTCCGCTGACGCATANACTCCTTTTATGT
GTTACGTCAACTCCTAAATTTATTTCATGTTGATGGATTTGCTTGCCTGT
GCCATGAATTCAGCTTGTTCTTTAGTTTGATATTACTCATGCATGTGCTT
TCCGAAGGAATTTTATGTGCATCATTTTTTTTTCATTATATAATTTCTTA
CACTTGTGAGTTTAAGTAATGCTTTTCTTTTTGCACATTGCAGCAAAAAA
TGGAGTGTACCTTACCCTGGTGAGAGATGTTAGGAATGCTTTTGAAGGAA
GTTCATTGGTTAAGGTTAACTGCAAAGGGATGCATGCAAGTGATTACAAG
AAGTTGGGTGCTAAGCTTAAGGAATTGGTTCCCTGCGTGCTATTATCTTT
TGACGATGAACAGATATTGATGTGGAGAGGAAAAGATTGGAAATCAATGT
ATCCAGAACCTCCTTCATTTTCAAATCCTGTTGACCTTGACATTGCTGGA
GATGCAGATGGTTCACGGACGCCTAGTGATGACCCTAGCCAAGGAACGAT
TAGATCAAGTCCTAAAATGATATCCCTTTGGAAGCGCGCAATTGAATCAA
CCAAGGCATTGGTACTGGATGAGATTAATCTTGGTCCTGATGATCTTTTG
AAGAAGGTTGAAGAATTTGAGGGTATTTCACAGGCCGCAGAGCACTCCTA
TCCAGCGTTAGTTTTGTCAAGGGAAGACGGTGCCAGTAGTTCAATGGCAG
AGTACGAAGATGGTTCTCAAAGTGAGAATTATGACGAAGATGAATTTTAT
CCTGGAGATGACTTCAACGATGACGATGAATTGTATGATAGTGACTCATC
TGATGTTGTCCCATTAGGGTCATTACCCTGTGATCTATAGCAGGAAAGCT
TCAGCGGAAATGAAATTCAAGTTAAGAAGATCAT
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