EH117779
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EH117779 vs. ExPASy Swiss-Prot
Match: RL131_ARATH (60S ribosomal protein L13-1 OS=Arabidopsis thaliana GN=RPL13B PE=1 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 4.507e-32 Identity = 67/82 (81.71%), Postives = 73/82 (89.02%), Query Frame = 1 Query: 13 IHKKLAPTIGVSVDHRRKNRSLEGLQSNVQRPKTYKAKLVVFPRRARKFKAGDSAPEELATATQVQGPYMPIAPEKPTVELV 258 I KKLAPTIG++VDHRRKNRSLEGLQ+NVQR KTYK KLV+FPRRARK KAGDS PEELA ATQVQG Y+PI EKPT+ELV Sbjct: 84 IPKKLAPTIGIAVDHRRKNRSLEGLQTNVQRLKTYKTKLVIFPRRARKVKAGDSTPEELANATQVQGDYLPIVREKPTMELV 165
BLAST of EH117779 vs. ExPASy Swiss-Prot
Match: RL133_ARATH (60S ribosomal protein L13-3 OS=Arabidopsis thaliana GN=RPL13D PE=2 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 3.815e-31 Identity = 68/82 (82.93%), Postives = 72/82 (87.80%), Query Frame = 1 Query: 13 IHKKLAPTIGVSVDHRRKNRSLEGLQSNVQRPKTYKAKLVVFPRRARKFKAGDSAPEELATATQVQGPYMPIAPEKPTVELV 258 I KKLAPTIG+SVDHRRKNRSLEGLQSNVQR KTYKAKLVVFPRR+R+ KAGDS PEELA ATQVQG YMPIA K +ELV Sbjct: 84 IPKKLAPTIGISVDHRRKNRSLEGLQSNVQRLKTYKAKLVVFPRRSRQVKAGDSTPEELANATQVQGDYMPIASVKAAMELV 165
BLAST of EH117779 vs. ExPASy Swiss-Prot
Match: RL132_BRANA (60S ribosomal protein L13-2 OS=Brassica napus PE=2 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 8.500e-31 Identity = 67/82 (81.71%), Postives = 71/82 (86.59%), Query Frame = 1 Query: 13 IHKKLAPTIGVSVDHRRKNRSLEGLQSNVQRPKTYKAKLVVFPRRARKFKAGDSAPEELATATQVQGPYMPIAPEKPTVELV 258 I KKLAPTIG+S+DHRRKNRSLEGLQSNVQR KTYKAKLV+FPRRARK KAGDS EELA ATQVQG YMPI EK +ELV Sbjct: 84 IPKKLAPTIGISLDHRRKNRSLEGLQSNVQRLKTYKAKLVIFPRRARKVKAGDSTAEELANATQVQGDYMPIVREKQAMELV 165
BLAST of EH117779 vs. ExPASy Swiss-Prot
Match: RL131_BRANA (60S ribosomal protein L13-1 OS=Brassica napus PE=2 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 1.450e-30 Identity = 67/82 (81.71%), Postives = 70/82 (85.37%), Query Frame = 1 Query: 13 IHKKLAPTIGVSVDHRRKNRSLEGLQSNVQRPKTYKAKLVVFPRRARKFKAGDSAPEELATATQVQGPYMPIAPEKPTVELV 258 I KKLAPTIG++VDHRRKNRSLEGLQSNVQR KTYKAKLV+FPRRARK KAGDS EELA ATQVQG YMPI EK ELV Sbjct: 84 IPKKLAPTIGIAVDHRRKNRSLEGLQSNVQRLKTYKAKLVIFPRRARKVKAGDSTAEELANATQVQGDYMPIVREKHATELV 165
BLAST of EH117779 vs. ExPASy Swiss-Prot
Match: RL132_ARATH (Putative 60S ribosomal protein L13-2 OS=Arabidopsis thaliana GN=RPL13C PE=3 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 5.701e-27 Identity = 61/82 (74.39%), Postives = 67/82 (81.71%), Query Frame = 1 Query: 13 IHKKLAPTIGVSVDHRRKNRSLEGLQSNVQRPKTYKAKLVVFPRRARKFKAGDSAPEELATATQVQGPYMPIAPEKPTVELV 258 I KKLAPTIG+SVDH RKNRSLEG Q+NVQR KTYKAKLV+FPR AR K GDSA +ELA ATQVQ +MPI E PT+ELV Sbjct: 84 IPKKLAPTIGISVDHHRKNRSLEGFQTNVQRLKTYKAKLVIFPRCARTVKVGDSAQQELANATQVQVDHMPIVREMPTMELV 165
BLAST of EH117779 vs. ExPASy Swiss-Prot
Match: RL13_DANRE (60S ribosomal protein L13 OS=Danio rerio GN=rpl13 PE=2 SV=3) HSP 1 Score: 93.9745 bits (232), Expect = 2.565e-19 Identity = 46/72 (63.89%), Postives = 56/72 (77.78%), Query Frame = 1 Query: 13 IHKKLAPTIGVSVDHRRKNRSLEGLQSNVQRPKTYKAKLVVFPRRARKFKAGDSAPEELATATQVQGPYMPI 228 I+KK+A TIG+SVD RR+NRS E LQ+NVQR K Y+ KL++FPR+A K K GDS EEL ATQ+ GP MPI Sbjct: 86 INKKVARTIGISVDSRRRNRSTESLQANVQRLKEYRTKLIIFPRKAAKPKKGDSTEEELKMATQLTGPVMPI 157
BLAST of EH117779 vs. ExPASy Swiss-Prot
Match: RL13_CHLSW (60S ribosomal protein L13 OS=Chlamydomonas sp. (strain W80) GN=RPL13 PE=2 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 5.715e-19 Identity = 44/82 (53.66%), Postives = 61/82 (74.39%), Query Frame = 1 Query: 13 IHKKLAPTIGVSVDHRRKNRSLEGLQSNVQRPKTYKAKLVVFPRRARKFKAGDSAPEELATATQVQGPYMPIAPEKPTVELV 258 I K APT+G++VDHRRKNRSLE LQ+NVQR KTY+A LV+FPR +K KA +++ + + A+Q +G +P+ KP +ELV Sbjct: 85 IPAKFAPTVGIAVDHRRKNRSLETLQANVQRLKTYRASLVIFPRNMKKPKAFEASAADCSAASQAKGELLPLKGTKPALELV 166
BLAST of EH117779 vs. ExPASy Swiss-Prot
Match: RL13_TOBAC (60S ribosomal protein L13 OS=Nicotiana tabacum GN=RPL13 PE=2 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 9.748e-19 Identity = 47/76 (61.84%), Postives = 56/76 (73.68%), Query Frame = 1 Query: 13 IHKKLAPTIGVSVDHRRKNRSLEGLQSNVQRPKTYKAKLVVFPRRARKFKAGDSAPEELATATQVQGPYMPIAPEK 240 I KKLAPTIG++VDHRR+NRSLEGLQ+NVQR + + +LVVFPRRA + + P TATQV G YMPI EK Sbjct: 80 IPKKLAPTIGIAVDHRRRNRSLEGLQTNVQRLEDLQGQLVVFPRRASRSRLVILPPRNCLTATQVHGAYMPIEREK 155
BLAST of EH117779 vs. ExPASy Swiss-Prot
Match: RL13_RAT (60S ribosomal protein L13 OS=Rattus norvegicus GN=Rpl13 PE=1 SV=2) HSP 1 Score: 91.2781 bits (225), Expect = 1.663e-18 Identity = 44/72 (61.11%), Postives = 56/72 (77.78%), Query Frame = 1 Query: 13 IHKKLAPTIGVSVDHRRKNRSLEGLQSNVQRPKTYKAKLVVFPRRARKFKAGDSAPEELATATQVQGPYMPI 228 IHKK+A TIG+SVD RR+N+S E LQ+NVQR K Y++KL++FPR+ K GDS+ EEL ATQ+ GP MPI Sbjct: 86 IHKKMARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLILFPRKPSAPKKGDSSAEELKLATQLTGPVMPI 157
BLAST of EH117779 vs. ExPASy Swiss-Prot
Match: RL13_MOUSE (60S ribosomal protein L13 OS=Mus musculus GN=Rpl13 PE=2 SV=3) HSP 1 Score: 90.8929 bits (224), Expect = 2.172e-18 Identity = 44/72 (61.11%), Postives = 56/72 (77.78%), Query Frame = 1 Query: 13 IHKKLAPTIGVSVDHRRKNRSLEGLQSNVQRPKTYKAKLVVFPRRARKFKAGDSAPEELATATQVQGPYMPI 228 IHKK+A TIG+SVD RR+N+S E LQ+NVQR K Y++KL++FPR+ K GDS+ EEL ATQ+ GP MPI Sbjct: 86 IHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLILFPRKPSAPKKGDSSAEELKLATQLTGPVMPI 157 The following BLAST results are available for this feature:
BLAST of EH117779 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 21
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Sequences
The
following sequences are available for this feature:
EST sequence >EH117779 ID=EH117779; Name=EH117779; organism=Citrus sinensis; type=EST; length=275bpback to top |