CX672058
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX672058 vs. ExPASy Swiss-Prot
Match: AP1M1_RAT (AP-1 complex subunit mu-1 OS=Rattus norvegicus GN=Ap1m1 PE=1 SV=3) HSP 1 Score: 231.491 bits (589), Expect = 4.981e-60 Identity = 111/160 (69.38%), Postives = 131/160 (81.88%), Query Frame = -3 Query: 406 LMTYRLSTQVKPLIWVEAQIERHSRSRIEIMVKARSQFKERSTATNVEIELPVPADATNPNVRTSMGSARYAPENDALVWKIKSFPGNKEYMLRAEFSLPSITAEEAAPERKAPIRVKFEIPYFTVSGIQVRYLKIIEKSGYQALPWVRYITMAGEYELR 885 LM+YRL+T VKPLIW+E+ IE+HS SRIE MVKA+SQFK RSTA NVEI +PVP DA +P +T++GS ++ PEN +VW IKSFPG KEY++RA F LPS+ AE+ E K PI VKFEIPYFT SGIQVRYLKIIEKSGYQALPWVRYIT G+Y+LR Sbjct: 264 LMSYRLNTHVKPLIWIESVIEKHSHSRIEYMVKAKSQFKRRSTANNVEIHIPVPNDADSPKFKTTVGSVKWVPENSEIVWSIKSFPGGKEYLMRAHFGLPSVEAED--KEGKPPISVKFEIPYFTTSGIQVRYLKIIEKSGYQALPWVRYITQNGDYQLR 421
BLAST of CX672058 vs. ExPASy Swiss-Prot
Match: AP1M1_MOUSE (AP-1 complex subunit mu-1 OS=Mus musculus GN=Ap1m1 PE=1 SV=3) HSP 1 Score: 231.106 bits (588), Expect = 6.506e-60 Identity = 110/160 (68.75%), Postives = 131/160 (81.88%), Query Frame = -3 Query: 406 LMTYRLSTQVKPLIWVEAQIERHSRSRIEIMVKARSQFKERSTATNVEIELPVPADATNPNVRTSMGSARYAPENDALVWKIKSFPGNKEYMLRAEFSLPSITAEEAAPERKAPIRVKFEIPYFTVSGIQVRYLKIIEKSGYQALPWVRYITMAGEYELR 885 LM+YRL+T VKPLIW+E+ IE+HS SRIE MVKA+SQFK RSTA NVEI +PVP DA +P +T++GS ++ PEN +VW +KSFPG KEY++RA F LPS+ AE+ E K PI VKFEIPYFT SGIQVRYLKIIEKSGYQALPWVRYIT G+Y+LR Sbjct: 264 LMSYRLNTHVKPLIWIESVIEKHSHSRIEYMVKAKSQFKRRSTANNVEIHIPVPNDADSPKFKTTVGSVKWVPENSEIVWSVKSFPGGKEYLMRAHFGLPSVEAED--KEGKPPISVKFEIPYFTTSGIQVRYLKIIEKSGYQALPWVRYITQNGDYQLR 421
BLAST of CX672058 vs. ExPASy Swiss-Prot
Match: AP1M1_HUMAN (AP-1 complex subunit mu-1 OS=Homo sapiens GN=AP1M1 PE=1 SV=3) HSP 1 Score: 231.106 bits (588), Expect = 6.506e-60 Identity = 110/160 (68.75%), Postives = 131/160 (81.88%), Query Frame = -3 Query: 406 LMTYRLSTQVKPLIWVEAQIERHSRSRIEIMVKARSQFKERSTATNVEIELPVPADATNPNVRTSMGSARYAPENDALVWKIKSFPGNKEYMLRAEFSLPSITAEEAAPERKAPIRVKFEIPYFTVSGIQVRYLKIIEKSGYQALPWVRYITMAGEYELR 885 LM+YRL+T VKPLIW+E+ IE+HS SRIE M+KA+SQFK RSTA NVEI +PVP DA +P +T++GS ++ PEN +VW IKSFPG KEY++RA F LPS+ AE+ E K PI VKFEIPYFT SGIQVRYLKIIEKSGYQALPWVRYIT G+Y+LR Sbjct: 264 LMSYRLNTHVKPLIWIESVIEKHSHSRIEYMIKAKSQFKRRSTANNVEIHIPVPNDADSPKFKTTVGSVKWVPENSEIVWSIKSFPGGKEYLMRAHFGLPSVEAED--KEGKPPISVKFEIPYFTTSGIQVRYLKIIEKSGYQALPWVRYITQNGDYQLR 421
BLAST of CX672058 vs. ExPASy Swiss-Prot
Match: AP1M1_BOVIN (AP-1 complex subunit mu-1 OS=Bos taurus GN=AP1M1 PE=1 SV=3) HSP 1 Score: 231.106 bits (588), Expect = 6.506e-60 Identity = 110/160 (68.75%), Postives = 131/160 (81.88%), Query Frame = -3 Query: 406 LMTYRLSTQVKPLIWVEAQIERHSRSRIEIMVKARSQFKERSTATNVEIELPVPADATNPNVRTSMGSARYAPENDALVWKIKSFPGNKEYMLRAEFSLPSITAEEAAPERKAPIRVKFEIPYFTVSGIQVRYLKIIEKSGYQALPWVRYITMAGEYELR 885 LM+YRL+T VKPLIW+E+ IE+HS SRIE M+KA+SQFK RSTA NVEI +PVP DA +P +T++GS ++ PEN +VW IKSFPG KEY++RA F LPS+ AE+ E K PI VKFEIPYFT SGIQVRYLKIIEKSGYQALPWVRYIT G+Y+LR Sbjct: 264 LMSYRLNTHVKPLIWIESVIEKHSHSRIEYMIKAKSQFKRRSTANNVEIHIPVPNDADSPKFKTTVGSVKWVPENSEIVWSIKSFPGGKEYLMRAHFGLPSVEAED--KEGKPPISVKFEIPYFTTSGIQVRYLKIIEKSGYQALPWVRYITQNGDYQLR 421
BLAST of CX672058 vs. ExPASy Swiss-Prot
Match: AP1M_CAEEL (AP-1 complex subunit mu-1-I OS=Caenorhabditis elegans GN=unc-101 PE=2 SV=2) HSP 1 Score: 229.565 bits (584), Expect = 1.893e-59 Identity = 109/161 (67.70%), Postives = 131/161 (81.37%), Query Frame = -3 Query: 403 LMTYRLSTQVKPLIWVEAQIERHSRSRIEIMVKARSQFKERSTATNVEIELPVPADATNPNVRTSMGSARYAPENDALVWKIKSFPGNKEYMLRAEFSLPSITAEEAAPERKAPIRVKFEIPYFTVSGIQVRYLKIIEKSGYQALPWVRYITMAGEYELRL 885 LM+YRL+T VKPLIW+E IERHS SR+ ++KA+SQFK RSTA NVEI +PVP+DA +P +TS+GS +Y PE A VW IK+FPG KEY+L A SLPS+ +EE+ E + PI+VKFEIPYFT SGIQVRYLKIIEKSGYQALPWVRYIT GEYE+R+ Sbjct: 263 LMSYRLTTVVKPLIWIETSIERHSHSRVSFIIKAKSQFKRRSTANNVEIIIPVPSDADSPKFKTSIGSVKYTPEQSAFVWTIKNFPGGKEYLLTAHLSLPSVMSEES--EGRPPIKVKFEIPYFTTSGIQVRYLKIIEKSGYQALPWVRYITQNGEYEMRM 421
BLAST of CX672058 vs. ExPASy Swiss-Prot
Match: AP1M2_MOUSE (AP-1 complex subunit mu-2 OS=Mus musculus GN=Ap1m2 PE=1 SV=3) HSP 1 Score: 229.18 bits (583), Expect = 2.472e-59 Identity = 108/160 (67.50%), Postives = 133/160 (83.12%), Query Frame = -3 Query: 406 LMTYRLSTQVKPLIWVEAQIERHSRSRIEIMVKARSQFKERSTATNVEIELPVPADATNPNVRTSMGSARYAPENDALVWKIKSFPGNKEYMLRAEFSLPSITAEEAAPERKAPIRVKFEIPYFTVSGIQVRYLKIIEKSGYQALPWVRYITMAGEYELR 885 LM+YRLSTQVKPLIW+E+ IE+ S SR+EIMVKA+ QFK++S A VEI +PVP+DA +P +TS+GSA+Y PE + ++W IKSFPG KEY++RA F LPS+ EE E + PI VKFEIPYFTVSGIQVRY+KIIEKSGYQALPWVRYIT +G+Y+LR Sbjct: 264 LMSYRLSTQVKPLIWIESVIEKFSHSRVEIMVKAKGQFKKQSVANGVEISVPVPSDADSPRFKTSVGSAKYVPEKNVVIWSIKSFPGGKEYLMRAHFGLPSVETEEV--EGRPPIGVKFEIPYFTVSGIQVRYMKIIEKSGYQALPWVRYITQSGDYQLR 421
BLAST of CX672058 vs. ExPASy Swiss-Prot
Match: AP1M2_HUMAN (AP-1 complex subunit mu-2 OS=Homo sapiens GN=AP1M2 PE=1 SV=4) HSP 1 Score: 228.794 bits (582), Expect = 3.229e-59 Identity = 108/160 (67.50%), Postives = 133/160 (83.12%), Query Frame = -3 Query: 406 LMTYRLSTQVKPLIWVEAQIERHSRSRIEIMVKARSQFKERSTATNVEIELPVPADATNPNVRTSMGSARYAPENDALVWKIKSFPGNKEYMLRAEFSLPSITAEEAAPERKAPIRVKFEIPYFTVSGIQVRYLKIIEKSGYQALPWVRYITMAGEYELR 885 LM+YRLSTQVKPLIW+E+ IE+ S SR+EIMVKA+ QFK++S A VEI +PVP+DA +P +TS+GSA+Y PE + ++W IKSFPG KEY++RA F LPS+ EE E + PI VKFEIPYFTVSGIQVRY+KIIEKSGYQALPWVRYIT +G+Y+LR Sbjct: 264 LMSYRLSTQVKPLIWIESVIEKFSHSRVEIMVKAKGQFKKQSVANGVEISVPVPSDADSPRFKTSVGSAKYVPERNVVIWSIKSFPGGKEYLMRAHFGLPSVEKEEV--EGRPPIGVKFEIPYFTVSGIQVRYMKIIEKSGYQALPWVRYITQSGDYQLR 421
BLAST of CX672058 vs. ExPASy Swiss-Prot
Match: AP1M2_BOVIN (AP-1 complex subunit mu-2 OS=Bos taurus GN=AP1M2 PE=1 SV=3) HSP 1 Score: 228.794 bits (582), Expect = 3.229e-59 Identity = 108/160 (67.50%), Postives = 133/160 (83.12%), Query Frame = -3 Query: 406 LMTYRLSTQVKPLIWVEAQIERHSRSRIEIMVKARSQFKERSTATNVEIELPVPADATNPNVRTSMGSARYAPENDALVWKIKSFPGNKEYMLRAEFSLPSITAEEAAPERKAPIRVKFEIPYFTVSGIQVRYLKIIEKSGYQALPWVRYITMAGEYELR 885 LM+YRLSTQVKPLIW+E+ IE+ S SR+EIMVKA+ QFK++S A VEI +PVP+DA +P +TS+GSA+Y PE + ++W IKSFPG KEY++RA F LPS+ EE E + PI VKFEIPYFTVSGIQVRY+KIIEKSGYQALPWVRYIT +G+Y+LR Sbjct: 264 LMSYRLSTQVKPLIWIESVIEKFSHSRVEIMVKAKGQFKKQSVANGVEISVPVPSDADSPRFKTSVGSAKYVPEKNTVIWSIKSFPGGKEYLMRAHFGLPSVEKEEV--EGRPPIGVKFEIPYFTVSGIQVRYMKIIEKSGYQALPWVRYITQSGDYQLR 421
BLAST of CX672058 vs. ExPASy Swiss-Prot
Match: AP1M_DICDI (AP-1 complex subunit mu OS=Dictyostelium discoideum GN=apm1 PE=1 SV=1) HSP 1 Score: 209.92 bits (533), Expect = 1.552e-53 Identity = 101/161 (62.73%), Postives = 127/161 (78.88%), Query Frame = -3 Query: 406 LMTYRLSTQVKPLIWVEAQIERHSRSRIEIMVKARSQFKERSTATNVEIELPVPADATNPNVRTSMGSARYAPENDALVWKIKSFP-GNKEYMLRAEFSLPSITAEEAAPERKAPIRVKFEIPYFTVSGIQVRYLKIIEKSGYQALPWVRYITMAGEYELR 885 LM+YRL+T VKPLIWVE + H+ SR+E MVKA+SQFK +S A NVEI +PVP DA P R ++G+ +YAPE DA++W IK FP G +E+++RA F LPSI+ E+ P K PI VKFEIPY+TVSGIQVRYLKIIEKSGYQALPWVRY+ ++G+Y+ R Sbjct: 268 LMSYRLNTTVKPLIWVECISDTHAHSRVEYMVKAKSQFKGKSIANNVEIIVPVPPDADTPKFRCTVGTCKYAPEKDAIIWTIKQFPGGGREFLMRAHFGLPSISDEK--PATKPPIMVKFEIPYYTVSGIQVRYLKIIEKSGYQALPWVRYVCLSGDYQFR 426
BLAST of CX672058 vs. ExPASy Swiss-Prot
Match: AP1M1_SCHPO (AP-1 complex subunit mu-1 OS=Schizosaccharomyces pombe GN=apm1 PE=1 SV=1) HSP 1 Score: 187.963 bits (476), Expect = 6.316e-47 Identity = 92/162 (56.79%), Postives = 118/162 (72.84%), Query Frame = -3 Query: 406 LMTYRLSTQVKPLIWVEAQIERHSRSRIEIMVKARSQFKERSTATNVEIELPVPADATNPNVRTSMGSARYAPENDALVWKIKSFPGNKEYMLRAEFSLPSITAEEAAPERKAPIRVKFEIPYFTVSGIQVRYLKIIE-KSGYQALPWVRYITMAG-EYELR 885 LM+YR+S+ V+PLIWVE + HS SRIE MVKA++QFK+R A NV+I +PVP DA +P +TS G +YAPE A+VW IK F G KE+ +RAE LPS+ E+ ++K P+++KF IPYFT SGIQVRYLKI E K Y A+PWVRY+T G EY +R Sbjct: 264 LMSYRMSSNVRPLIWVECESIVHSGSRIEFMVKAKAQFKKRCIANNVQIIIPVPEDADSPRFQTSNGHVQYAPEQAAMVWNIKKFAGGKEFFMRAEMGLPSVKNEDIQVQKKRPVQLKFAIPYFTTSGIQVRYLKITEPKLNYHAMPWVRYVTQNGTEYSIR 425 The following BLAST results are available for this feature:
BLAST of CX672058 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 26
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Sequences
The
following sequences are available for this feature:
EST sequence >CX672058 ID=CX672058; Name=CX672058; organism=Citrus sinensis; type=EST; length=887bpback to top |