CX671984

Overview
NameCX671984
Unique NameCX671984
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length843
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13690 contig Csv1_Contig13690:16..858. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX671984 vs. ExPASy Swiss-Prot
Match: MDHG_CITLA (Malate dehydrogenase, glyoxysomal OS=Citrullus lanatus PE=1 SV=1)

HSP 1 Score: 318.161 bits (814), Expect = 3.730e-86
Identity = 162/181 (89.50%), Postives = 168/181 (92.82%), Query Frame = -1
Query:  301 FKKVGTYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSCSLTPTEIDYLTDRIQNGGTEVVEAKAGAGSATLSMAYAAAKFADACLRGLRGDASVIECAYVASTVTELPFFASKVRLGRARIEEIYSLGPLNEYERAGLEKAKKELAGSIQKGVSFVR 843
            FKK GTYDPKRLLGVTMLDVVRANTFVAEVLGLDPR+VDVPVVGGHAGVTILPLLSQVKP  S T  EI YLTDRIQNGGTEVVEAKAGAGSATLSMAYAA KFADACLRGLRGDA VIECA+V+S VTELPFFASKVRLGR  IEE+YSLGPLNEYER GLEKAKKELAGSI+KGVSF+R
Sbjct:  175 FKKAGTYDPKRLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPSSFTQEEISYLTDRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVIECAFVSSQVTELPFFASKVRLGRNGIEEVYSLGPLNEYERIGLEKAKKELAGSIEKGVSFIR 355          
BLAST of CX671984 vs. ExPASy Swiss-Prot
Match: MDHG_CUCSA (Malate dehydrogenase, glyoxysomal OS=Cucumis sativus GN=MDHG PE=2 SV=1)

HSP 1 Score: 313.923 bits (803), Expect = 7.035e-85
Identity = 158/181 (87.29%), Postives = 169/181 (93.37%), Query Frame = -1
Query:  301 FKKVGTYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSCSLTPTEIDYLTDRIQNGGTEVVEAKAGAGSATLSMAYAAAKFADACLRGLRGDASVIECAYVASTVTELPFFASKVRLGRARIEEIYSLGPLNEYERAGLEKAKKELAGSIQKGVSFVR 843
            FKK GTYDPKRLLGVTMLDVVRANTFVAEVLGLDPR+V+VPVVGGHAGVTILPLLSQVKP  S T  EI+YLTDRIQNGGTEVVEAKAGAGSATLSMAYAA KFADACLRGLRGDA V+ECA+V+S VTELPFFA+KVRLGR  I+E+YSLGPLNEYER GLEKAKKELAGSI+KGVSF+R
Sbjct:  175 FKKAGTYDPKRLLGVTMLDVVRANTFVAEVLGLDPRDVNVPVVGGHAGVTILPLLSQVKPPSSFTQEEINYLTDRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECAFVSSQVTELPFFATKVRLGRNGIDEVYSLGPLNEYERIGLEKAKKELAGSIEKGVSFIR 355          
BLAST of CX671984 vs. ExPASy Swiss-Prot
Match: MDHG2_BRANA (Malate dehydrogenase 2, glyoxysomal OS=Brassica napus GN=MDH2 PE=3 SV=1)

HSP 1 Score: 310.842 bits (795), Expect = 5.955e-84
Identity = 156/182 (85.71%), Postives = 168/182 (92.31%), Query Frame = -1
Query:  298 FKKVGTYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSCSLTPTEIDYLTDRIQNGGTEVVEAKAGAGSATLSMAYAAAKFADACLRGLRGDASVIECAYVASTVTELPFFASKVRLGRARIEEIYSLGPLNEYERAGLEKAKKELAGSIQKGVSFVRK 843
            FKK GTYDPK+LLGVT LDV RANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKP  S TP+EI+YLT+RIQNGGTEVVEAKAGAGSATLSMAYAAAKFADACLRGLRGDA+VIEC++VAS VTEL FFA+KVRLGR   EE++ LGPLNEYER GLEKAK+ELAGSIQKGV F+RK
Sbjct:  177 FKKAGTYDPKKLLGVTTLDVARANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPPSSFTPSEIEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAAKFADACLRGLRGDANVIECSFVASQVTELAFFATKVRLGRTGAEEVFQLGPLNEYERVGLEKAKEELAGSIQKGVDFIRK 358          
BLAST of CX671984 vs. ExPASy Swiss-Prot
Match: MDHG1_BRANA (Malate dehydrogenase 1, glyoxysomal OS=Brassica napus GN=MDH1 PE=2 SV=2)

HSP 1 Score: 310.842 bits (795), Expect = 5.955e-84
Identity = 156/182 (85.71%), Postives = 168/182 (92.31%), Query Frame = -1
Query:  298 FKKVGTYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSCSLTPTEIDYLTDRIQNGGTEVVEAKAGAGSATLSMAYAAAKFADACLRGLRGDASVIECAYVASTVTELPFFASKVRLGRARIEEIYSLGPLNEYERAGLEKAKKELAGSIQKGVSFVRK 843
            FKK GTYDPK+LLGVT LDV RANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKP  S TP+EI+YLT+RIQNGGTEVVEAKAGAGSATLSMAYAAAKFADACLRGLRGDA+VIEC++VAS VTEL FFA+KVRLGR   EE++ LGPLNEYER GLEKAK+ELAGSIQKGV F+RK
Sbjct:  177 FKKAGTYDPKKLLGVTTLDVARANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPPSSFTPSEIEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAAKFADACLRGLRGDANVIECSFVASQVTELAFFATKVRLGRTGAEEVFQLGPLNEYERVGLEKAKEELAGSIQKGVDFIRK 358          
BLAST of CX671984 vs. ExPASy Swiss-Prot
Match: MDHG1_ARATH (Malate dehydrogenase, glyoxysomal OS=Arabidopsis thaliana GN=At5g09660 PE=1 SV=1)

HSP 1 Score: 310.071 bits (793), Expect = 1.016e-83
Identity = 156/182 (85.71%), Postives = 166/182 (91.21%), Query Frame = -1
Query:  298 FKKVGTYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSCSLTPTEIDYLTDRIQNGGTEVVEAKAGAGSATLSMAYAAAKFADACLRGLRGDASVIECAYVASTVTELPFFASKVRLGRARIEEIYSLGPLNEYERAGLEKAKKELAGSIQKGVSFVRK 843
            FKK GTYDPK+LLGVT LDV RANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKP  S TP EI+YLT+RIQNGGTEVVEAKAGAGSATLSMAYAAAKFADACLRGLRGDA+V+EC++VAS VTEL FFA+KVRLGR   EE+Y LGPLNEYER GLEKAK ELAGSIQKGV F+RK
Sbjct:  173 FKKAGTYDPKKLLGVTTLDVARANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPPSSFTPQEIEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAAKFADACLRGLRGDANVVECSFVASQVTELAFFATKVRLGRTGAEEVYQLGPLNEYERIGLEKAKDELAGSIQKGVEFIRK 354          
BLAST of CX671984 vs. ExPASy Swiss-Prot
Match: MDHG_ORYSJ (Malate dehydrogenase, glyoxysomal OS=Oryza sativa subsp. japonica GN=Os12g0632700 PE=1 SV=3)

HSP 1 Score: 307.76 bits (787), Expect = 5.041e-83
Identity = 155/182 (85.16%), Postives = 166/182 (91.21%), Query Frame = -1
Query:  298 FKKVGTYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSCSLTPTEIDYLTDRIQNGGTEVVEAKAGAGSATLSMAYAAAKFADACLRGLRGDASVIECAYVASTVTELPFFASKVRLGRARIEEIYSLGPLNEYERAGLEKAKKELAGSIQKGVSFVRK 843
            FKK GTYDPKRLLGVT LDVVRANTFVAEVLGLDPR+V+VPV+GGHAGVTILPLLSQV P CS T  EI YLT RIQNGGTEVVEAKAGAGSATLSMAYAA+KFADACLRGLRGDA ++EC++VAS VTELPFFASKVRLGR  IEEI SLGPLNE+ERAGLEKAKKELA SIQKGV+F+ K
Sbjct:  175 FKKAGTYDPKRLLGVTTLDVVRANTFVAEVLGLDPRDVNVPVIGGHAGVTILPLLSQVNPPCSFTSEEISYLTTRIQNGGTEVVEAKAGAGSATLSMAYAASKFADACLRGLRGDAGIVECSFVASQVTELPFFASKVRLGRCGIEEILSLGPLNEFERAGLEKAKKELAESIQKGVAFINK 356          
BLAST of CX671984 vs. ExPASy Swiss-Prot
Match: MDHG_SOYBN (Malate dehydrogenase, glyoxysomal OS=Glycine max PE=2 SV=2)

HSP 1 Score: 307.375 bits (786), Expect = 6.584e-83
Identity = 152/182 (83.52%), Postives = 164/182 (90.11%), Query Frame = -1
Query:  298 FKKVGTYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSCSLTPTEIDYLTDRIQNGGTEVVEAKAGAGSATLSMAYAAAKFADACLRGLRGDASVIECAYVASTVTELPFFASKVRLGRARIEEIYSLGPLNEYERAGLEKAKKELAGSIQKGVSFVRK 843
            FK+ GTYDPKRLLGVTMLDVVRANTFVAEVLG+DPR+VDVPVVGGHAG+TILPLLSQ+KP CS TP EI+YLT RIQNGG EVVEAKAGAGSATLSMAYAA KFADACL  LRGDA +IECAYVAS VTELPFFASKVRLGR  +EEI  LGPLN+YER  LEKAKKELA SI+KG+SF+RK
Sbjct:  172 FKRAGTYDPKRLLGVTMLDVVRANTFVAEVLGVDPRDVDVPVVGGHAGITILPLLSQIKPPCSFTPKEIEYLTGRIQNGGPEVVEAKAGAGSATLSMAYAAVKFADACLHALRGDAGIIECAYVASQVTELPFFASKVRLGRVGVEEILPLGPLNDYERESLEKAKKELAASIEKGISFIRK 353          
BLAST of CX671984 vs. ExPASy Swiss-Prot
Match: MDHG2_ARATH (Probable malate dehydrogenase, glyoxysomal OS=Arabidopsis thaliana GN=At2g22780 PE=1 SV=1)

HSP 1 Score: 307.375 bits (786), Expect = 6.584e-83
Identity = 152/182 (83.52%), Postives = 167/182 (91.76%), Query Frame = -1
Query:  298 FKKVGTYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSCSLTPTEIDYLTDRIQNGGTEVVEAKAGAGSATLSMAYAAAKFADACLRGLRGDASVIECAYVASTVTELPFFASKVRLGRARIEEIYSLGPLNEYERAGLEKAKKELAGSIQKGVSFVRK 843
            FKK GT+DPK+L+GVTMLDVVRANTFVAEV+ LDPREV+VPVVGGHAGVTILPLLSQVKP CS T  EI+YLTDRIQNGGTEVVEAKAGAGSATLSMAYAA +FADACLRGLRGDA+++ECAYVAS VTELPFFASKVRLGR  I+E+Y LGPLNEYER GLEKAKKEL+ SI KGV+F +K
Sbjct:  173 FKKAGTFDPKKLMGVTMLDVVRANTFVAEVMSLDPREVEVPVVGGHAGVTILPLLSQVKPPCSFTQKEIEYLTDRIQNGGTEVVEAKAGAGSATLSMAYAAVEFADACLRGLRGDANIVECAYVASHVTELPFFASKVRLGRCGIDEVYGLGPLNEYERMGLEKAKKELSVSIHKGVTFAKK 354          
BLAST of CX671984 vs. ExPASy Swiss-Prot
Match: MDHM2_ARATH (Malate dehydrogenase 2, mitochondrial OS=Arabidopsis thaliana GN=At3g15020 PE=1 SV=1)

HSP 1 Score: 226.098 bits (575), Expect = 1.929e-58
Identity = 114/182 (62.64%), Postives = 138/182 (75.82%), Query Frame = -1
Query:  298 FKKVGTYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSCSLTPTEIDYLTDRIQNGGTEVVEAKAGAGSATLSMAYAAAKFADACLRGLRGDASVIECAYVASTVTELPFFASKVRLGRARIEEIYSLGPLNEYERAGLEKAKKELAGSIQKGVSFVRK 843
            FKK GTYD K+L GVT LDVVRA TF A    ++  EV+VPVVGGHAG+TILPL SQ  P  +L+   I  LT R Q+GGTEVVEAKAG GSATLSMAYA A FADACL+GL G  +V+EC++V ST+TELPFFASKVRLG+  +EE+  LGPL+++E+ GLE  K EL  SI+KG+ F  +
Sbjct:  160 FKKAGTYDEKKLFGVTTLDVVRARTFYAGKSDVNVAEVNVPVVGGHAGITILPLFSQASPQANLSDDLIRALTKRTQDGGTEVVEAKAGKGSATLSMAYAGALFADACLKGLNGVPNVVECSFVQSTITELPFFASKVRLGKNGVEEVLDLGPLSDFEKEGLEALKAELKSSIEKGIKFANQ 341          
BLAST of CX671984 vs. ExPASy Swiss-Prot
Match: MDHM1_ARATH (Malate dehydrogenase 1, mitochondrial OS=Arabidopsis thaliana GN=At1g53240 PE=1 SV=1)

HSP 1 Score: 224.942 bits (572), Expect = 4.298e-58
Identity = 115/182 (63.19%), Postives = 135/182 (74.18%), Query Frame = -1
Query:  298 FKKVGTYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSCSLTPTEIDYLTDRIQNGGTEVVEAKAGAGSATLSMAYAAAKFADACLRGLRGDASVIECAYVASTVTELPFFASKVRLGRARIEEIYSLGPLNEYERAGLEKAKKELAGSIQKGVSFVRK 843
            FKK G YD K+L GVT LDVVRA TF A    +   EV+VPV+GGHAGVTILPL SQ  P  +L+   +  LT R Q+GGTEVVEAKAG GSATLSMAYA A FADACL+GL G   VIEC+YV ST+TELPFFASKVRLG+  +EE+  LGPL+++E+ GLE  K EL  SI+KGV F  +
Sbjct:  160 FKKAGMYDEKKLFGVTTLDVVRARTFYAGKANVPVAEVNVPVIGGHAGVTILPLFSQATPQANLSSDILTALTKRTQDGGTEVVEAKAGKGSATLSMAYAGALFADACLKGLNGVPDVIECSYVQSTITELPFFASKVRLGKNGVEEVLDLGPLSDFEKEGLEALKPELKSSIEKGVKFANQ 341          
The following BLAST results are available for this feature:
BLAST of CX671984 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 154
Match NameE-valueIdentityDescription
MDHG_CITLA3.730e-8689.50Malate dehydrogenase, glyoxysomal OS=Citrullus lan... [more]
MDHG_CUCSA7.035e-8587.29Malate dehydrogenase, glyoxysomal OS=Cucumis sativ... [more]
MDHG2_BRANA5.955e-8485.71Malate dehydrogenase 2, glyoxysomal OS=Brassica na... [more]
MDHG1_BRANA5.955e-8485.71Malate dehydrogenase 1, glyoxysomal OS=Brassica na... [more]
MDHG1_ARATH1.016e-8385.71Malate dehydrogenase, glyoxysomal OS=Arabidopsis t... [more]
MDHG_ORYSJ5.041e-8385.16Malate dehydrogenase, glyoxysomal OS=Oryza sativa ... [more]
MDHG_SOYBN6.584e-8383.52Malate dehydrogenase, glyoxysomal OS=Glycine max P... [more]
MDHG2_ARATH6.584e-8383.52Probable malate dehydrogenase, glyoxysomal OS=Arab... [more]
MDHM2_ARATH1.929e-5862.64Malate dehydrogenase 2, mitochondrial OS=Arabidops... [more]
MDHM1_ARATH4.298e-5863.19Malate dehydrogenase 1, mitochondrial OS=Arabidops... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_14C08_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-14C08-E16-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671984 ID=CX671984; Name=CX671984; organism=Citrus sinensis; type=EST; length=843bp
TTTTTTTTTTTTTTGGCAGAAGTATGAACTCTGATTTTGAATTGATTAAA
ATGATAAGACAGGCGGCAGTTCGTCATCTACATATTCTTTATCCATTCAT
TACAAGAATATCAAAAGAACCAAACCAACCCCACAAAGATGAATCTTTTG
CTTCTTCTTTGTACCTAACTTAATTCCATCTGATTATGGAAAAACGAAAA
CCCTACCTCTTATTCTGGGGAAAGTAATCTTGAGATATTTGAGGCAAACA
ACAAAAGCACAACCATTATCATTAGTCACCATGTGATTGGTTACTCATTT
CCTGACAAAACTGACTCCCTTCTGAATGCTTCCCGCTAACTCTTTCTTTG
CCTTCTCCAAACCAGCCCTCTCATACTCATTCAATGGGCCAAGTGAGTAA
ATTTCCTCAATTCTAGCACGGCCAAGCCGTACCTTGGATGCAAAGAAAGG
GAGTTCAGTCACCGTAGAAGCCACGTATGCACACTCAATAACACTGGCAT
CCCCCCTCAAACCTCGGAGACAAGCATCTGCAAACTTGGCAGCAGCATAT
GCCATGGATAGAGTGGCCGAACCAGCTCCAGCTTTTGCCTCAACTACTTC
TGTACCACCATTCTGGATACGATCTGTCAAGTAGTCAATTTCTGTAGGGG
TGAGAGAGCATGATGGTTTAACCTGAGATAAAAGAGGTAAAATAGTAACC
CCAGCATGACCTCCCACAACTGGAACATCAACTTCCCTGGGGTCAAGACC
CAAGACCTCAGCCACAAAAGTATTGGCTCGAACAACATCAAGCATTGTGA
CTCCCAAAAGTCGCTTTGGATCATAAGTGCCAACTTTCTTGAA
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