CX671770
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX671770 vs. ExPASy Swiss-Prot
Match: CH10C_ARATH (20 kDa chaperonin, chloroplastic OS=Arabidopsis thaliana GN=CPN21 PE=1 SV=2) HSP 1 Score: 350.903 bits (899), Expect = 5.822e-96 Identity = 182/248 (73.39%), Postives = 205/248 (82.66%), Query Frame = -3 Query: 164 LTASSIKVPARSLTSFDGLRPSSVKFASVG-GAPSQRSFRRLXXXXXXXXAPKYTSIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILETDEIKDLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVLS 904 LTAS + + ARSL S DGLR SSVKF+S+ G Q FRRL APKYTSIKPLGDRVLVKIK EEKT GGI LPSTAQ+KPQ GEVVAVGEG+T+GK K+DI+V G Q+IYSKYAGTE+EFN HLIL+EDD+VGILET++IKDLKPLNDRVFIKVAEAEE TAGGLLLTE +KEKPSIG VIAVGPG LDEEG PL ++ G+TV+YSKYAGNDFKG DG+NYIALRAS+VMA+LS Sbjct: 6 LTASPVTMSARSLASLDGLRASSVKFSSLKPGTLRQSQFRRLVVKAASVVAPKYTSIKPLGDRVLVKIKEAEEKTLGGILLPSTAQSKPQGGEVVAVGEGRTIGKNKIDITVPTGAQIIYSKYAGTEVEFNDVKHLILKEDDIVGILETEDIKDLKPLNDRVFIKVAEAEEKTAGGLLLTETTKEKPSIGTVIAVGPGSLDEEGKITPLPVSTGSTVLYSKYAGNDFKGKDGSNYIALRASDVMAILS 253
BLAST of CX671770 vs. ExPASy Swiss-Prot
Match: CH10C_SPIOL (20 kDa chaperonin, chloroplastic OS=Spinacia oleracea GN=CPN21 PE=2 SV=1) HSP 1 Score: 298.13 bits (762), Expect = 4.479e-80 Identity = 149/248 (60.08%), Postives = 187/248 (75.40%), Query Frame = -3 Query: 164 SSIKVPARSLTSFDGLRPSS----VKFASVGGAPSQRSFRRLXXXXXXXXAPKYTSIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILETDEIKDLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVLS 895 S+ + +L SF+GLR +S + + + + RSFR L KYTS+KPLGDRVL+K K VEEKT GIFLP+ AQ KPQ+GEVVA+G GK VG KL ++VK G +V+YSKY GTE+E +G++HLI++EDD++GILETD++KDLKPLNDR+ IKVAE E T+GGLLL E+SKEKPS G V+A GPG LDEEGNR PL + GNTV+YSKYAGNDFKG DG++Y+ LR S+VMAVLS Sbjct: 8 STSSLTINTLPSFEGLRSASGISKINVSVAYPSFTSRSFRGLVVRAASITTSKYTSVKPLGDRVLIKTKIVEEKTTSGIFLPTAAQKKPQSGEVVAIGSGKKVGDKKLPVAVKTGAEVVYSKYTGTEIEVDGSSHLIVKEDDIIGILETDDVKDLKPLNDRLLIKVAEVENKTSGGLLLAESSKEKPSFGTVVATGPGVLDEEGNRIPLPVCSGNTVLYSKYAGNDFKGVDGSDYMVLRVSDVMAVLS 255
BLAST of CX671770 vs. ExPASy Swiss-Prot
Match: CH10_RHOMR (10 kDa chaperonin OS=Rhodothermus marinus GN=groS PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 5.033e-23 Identity = 48/95 (50.53%), Postives = 72/95 (75.79%), Query Frame = -3 Query: 455 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILETDE 739 IKPL DRV++K + EEKT+ G+++P TA+ KPQ G V+AVG G+ TK+++SVK G +V+Y KYAGTE+ +G +LI+RE D++GI+E ++ Sbjct: 6 IKPLSDRVVIKPEPPEEKTESGLYIPDTAKEKPQRGTVIAVGPGRVENGTKIEMSVKEGDKVLYGKYAGTEITIDGEEYLIMRETDILGIIEEEK 100 HSP 2 Score: 78.1814 bits (191), Expect = 7.284e-14 Identity = 39/93 (41.94%), Postives = 59/93 (63.44%), Query Frame = -3 Query: 167 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVL 445 +KPL+DRV IK EE T GL + + +KEKP G VIAVGPG + E G + +S+ G+ V+Y KYAG + DG Y+ +R ++++ ++ Sbjct: 6 IKPLSDRVVIKPEPPEEKTESGLYIPDTAKEKPQRGTVIAVGPGRV-ENGTKIEMSVKEGDKVLYGKYAGTEIT-IDGEEYLIMRETDILGII 96
BLAST of CX671770 vs. ExPASy Swiss-Prot
Match: CH10_THEPX (10 kDa chaperonin OS=Thermoanaerobacter sp. (strain X514) GN=groS PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 8.585e-23 Identity = 50/92 (54.35%), Postives = 70/92 (76.09%), Query Frame = -3 Query: 464 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 739 +KPLGDRV+VK+ EE T GG+ LP TA+ KPQ GEVVAVG G+ + K+++ VK G +VI+SKYAGTE++ +G +L+LRE D++ I+E Sbjct: 3 LKPLGDRVVVKVIQAEEVTKGGVILPGTAKEKPQQGEVVAVGTGQYIDGKKVELEVKVGDRVIFSKYAGTEVKLDGEEYLLLRESDILAIIE 94 HSP 2 Score: 83.1889 bits (204), Expect = 2.264e-15 Identity = 43/93 (46.24%), Postives = 62/93 (66.67%), Query Frame = -3 Query: 167 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVL 445 LKPL DRV +KV +AEE T GG++L +KEKP G V+AVG G +G + L + G+ V++SKYAG + K DG Y+ LR S+++A++ Sbjct: 3 LKPLGDRVVVKVIQAEEVTKGGVILPGTAKEKPQQGEVVAVGTGQY-IDGKKVELEVKVGDRVIFSKYAGTEVK-LDGEEYLLLRESDILAII 93
BLAST of CX671770 vs. ExPASy Swiss-Prot
Match: CH10_THEP3 (10 kDa chaperonin OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) GN=groS PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 8.585e-23 Identity = 50/92 (54.35%), Postives = 70/92 (76.09%), Query Frame = -3 Query: 464 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 739 +KPLGDRV+VK+ EE T GG+ LP TA+ KPQ GEVVAVG G+ + K+++ VK G +VI+SKYAGTE++ +G +L+LRE D++ I+E Sbjct: 3 LKPLGDRVVVKVIQAEEVTKGGVILPGTAKEKPQQGEVVAVGTGQYIDGKKVELEVKVGDRVIFSKYAGTEVKLDGEEYLLLRESDILAIIE 94 HSP 2 Score: 83.1889 bits (204), Expect = 2.264e-15 Identity = 43/93 (46.24%), Postives = 62/93 (66.67%), Query Frame = -3 Query: 167 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVL 445 LKPL DRV +KV +AEE T GG++L +KEKP G V+AVG G +G + L + G+ V++SKYAG + K DG Y+ LR S+++A++ Sbjct: 3 LKPLGDRVVVKVIQAEEVTKGGVILPGTAKEKPQQGEVVAVGTGQY-IDGKKVELEVKVGDRVIFSKYAGTEVK-LDGEEYLLLRESDILAII 93
BLAST of CX671770 vs. ExPASy Swiss-Prot
Match: CH10_THEBR (10 kDa chaperonin OS=Thermoanaerobacter brockii GN=groS PE=1 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 8.585e-23 Identity = 50/92 (54.35%), Postives = 70/92 (76.09%), Query Frame = -3 Query: 464 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 739 +KPLGDRV+VK+ EE T GG+ LP TA+ KPQ GEVVAVG G+ + K+++ VK G +VI+SKYAGTE++ +G +L+LRE D++ I+E Sbjct: 3 LKPLGDRVVVKVIQAEEVTKGGVILPGTAKEKPQQGEVVAVGTGEYIDGKKVELEVKVGDRVIFSKYAGTEVKLDGEEYLLLRESDILAIIE 94 HSP 2 Score: 83.1889 bits (204), Expect = 2.264e-15 Identity = 43/93 (46.24%), Postives = 62/93 (66.67%), Query Frame = -3 Query: 167 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVL 445 LKPL DRV +KV +AEE T GG++L +KEKP G V+AVG G +G + L + G+ V++SKYAG + K DG Y+ LR S+++A++ Sbjct: 3 LKPLGDRVVVKVIQAEEVTKGGVILPGTAKEKPQQGEVVAVGTGEY-IDGKKVELEVKVGDRVIFSKYAGTEVK-LDGEEYLLLRESDILAII 93
BLAST of CX671770 vs. ExPASy Swiss-Prot
Match: CH10_NATTJ (10 kDa chaperonin OS=Natranaerobius thermophilus (strain ATCC BAA-1301 / DSM 18059 / JW/NM-WN-LF) GN=groS PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 3.262e-22 Identity = 49/94 (52.13%), Postives = 72/94 (76.60%), Query Frame = -3 Query: 464 SIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGK-TKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 742 ++KPLGDR+++KI EEKT+ GI LP A+ KPQ GEVVAVG GKT+ +K++ VK G +V+YSK+AG E+E +G +LI+R+DD++ ++E Sbjct: 2 NLKPLGDRIVIKILEAEEKTESGIVLPEKAKEKPQEGEVVAVGSGKTLDDGSKVEPEVKAGDKVVYSKFAGNEVEVDGEEYLIMRQDDILAVIE 95 HSP 2 Score: 85.8853 bits (211), Expect = 3.493e-16 Identity = 41/94 (43.62%), Postives = 64/94 (68.09%), Query Frame = -3 Query: 167 DLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVL 448 +LKPL DR+ IK+ EAEE T G++L E +KEKP G V+AVG G ++G++ + G+ V+YSK+AGN+ + DG Y+ +R +++AV+ Sbjct: 2 NLKPLGDRIVIKILEAEEKTESGIVLPEKAKEKPQEGEVVAVGSGKTLDDGSKVEPEVKAGDKVVYSKFAGNEVE-VDGEEYLIMRQDDILAVI 94
BLAST of CX671770 vs. ExPASy Swiss-Prot
Match: CH10_DESVV (10 kDa chaperonin OS=Desulfovibrio vulgaris subsp. vulgaris (strain DP4) GN=groS PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 9.492e-22 Identity = 50/94 (53.19%), Postives = 69/94 (73.40%), Query Frame = -3 Query: 464 SIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKL-DISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 742 ++KPL DRVLVK EEKT GG+++P TA+ KP GEVVA G GKT KL ++VK G V+++KYAGTE++ +G HL++REDD++ I+E Sbjct: 2 NLKPLNDRVLVKRLESEEKTAGGLYIPDTAKEKPSRGEVVAAGPGKTADDGKLVAMTVKAGDMVLFNKYAGTEIKIDGVEHLVMREDDILAIIE 95 HSP 2 Score: 89.3521 bits (220), Expect = 3.160e-17 Identity = 40/94 (42.55%), Postives = 65/94 (69.15%), Query Frame = -3 Query: 167 DLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVL 448 +LKPLNDRV +K E+EE TAGGL + + +KEKPS G V+A GPG ++G +++ G+ V+++KYAG + K DG ++ +R +++A++ Sbjct: 2 NLKPLNDRVLVKRLESEEKTAGGLYIPDTAKEKPSRGEVVAAGPGKTADDGKLVAMTVKAGDMVLFNKYAGTEIK-IDGVEHLVMREDDILAII 94
BLAST of CX671770 vs. ExPASy Swiss-Prot
Match: CH10_DESVH (10 kDa chaperonin OS=Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB 8303) GN=groS PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 9.492e-22 Identity = 50/94 (53.19%), Postives = 69/94 (73.40%), Query Frame = -3 Query: 464 SIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKL-DISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 742 ++KPL DRVLVK EEKT GG+++P TA+ KP GEVVA G GKT KL ++VK G V+++KYAGTE++ +G HL++REDD++ I+E Sbjct: 2 NLKPLNDRVLVKRLESEEKTAGGLYIPDTAKEKPSRGEVVAAGPGKTADDGKLVAMTVKAGDMVLFNKYAGTEIKIDGVEHLVMREDDILAIIE 95 HSP 2 Score: 89.3521 bits (220), Expect = 3.160e-17 Identity = 40/94 (42.55%), Postives = 65/94 (69.15%), Query Frame = -3 Query: 167 DLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVL 448 +LKPLNDRV +K E+EE TAGGL + + +KEKPS G V+A GPG ++G +++ G+ V+++KYAG + K DG ++ +R +++A++ Sbjct: 2 NLKPLNDRVLVKRLESEEKTAGGLYIPDTAKEKPSRGEVVAAGPGKTADDGKLVAMTVKAGDMVLFNKYAGTEIK-IDGVEHLVMREDDILAII 94
BLAST of CX671770 vs. ExPASy Swiss-Prot
Match: CH10_DESHY (10 kDa chaperonin OS=Desulfitobacterium hafniense (strain Y51) GN=groS PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 9.492e-22 Identity = 49/92 (53.26%), Postives = 69/92 (75.00%), Query Frame = -3 Query: 467 SIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGIL 742 +IKPLGDRV++K +EEKT GI +P TA+ KPQ GEVVAVG GK ++ + VK G +VIYSKYAGTE++++G +LIL+E D++ ++ Sbjct: 2 NIKPLGDRVVIKALPMEEKTKSGIIMPDTAKEKPQEGEVVAVGPGKMEKGERIVLDVKVGDRVIYSKYAGTEVKYDGQEYLILKETDILAVI 93 HSP 2 Score: 83.9593 bits (206), Expect = 1.328e-15 Identity = 42/94 (44.68%), Postives = 63/94 (67.02%), Query Frame = -3 Query: 167 DLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVL 448 ++KPL DRV IK EE T G+++ + +KEKP G V+AVGPG + E+G R L + G+ V+YSKYAG + K DG Y+ L+ ++++AV+ Sbjct: 2 NIKPLGDRVVIKALPMEEKTKSGIIMPDTAKEKPQEGEVVAVGPGKM-EKGERIVLDVKVGDRVIYSKYAGTEVK-YDGQEYLILKETDILAVI 93 The following BLAST results are available for this feature:
BLAST of CX671770 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX671770 ID=CX671770; Name=CX671770; organism=Citrus sinensis; type=EST; length=906bpback to top |