CX671678
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX671678 vs. ExPASy Swiss-Prot
Match: NCBP1_ARATH (Nuclear cap-binding protein subunit 1 OS=Arabidopsis thaliana GN=ABH1 PE=1 SV=2) HSP 1 Score: 316.235 bits (809), Expect = 1.222e-85 Identity = 150/217 (69.12%), Postives = 183/217 (84.33%), Query Frame = 1 Query: 115 MSSWKNLLLKIGDNCPEYGNSDDLKDHIETCFGVIRRELEHSFDDVPHYIINCAEQIPHKIPLYGTLVGLLNLENEDFVKKVVETTQRKFQDALDSGNCDRIRILMRFLTVMMCSKILQPGSLVVVFETLLSSAATTVDEDKGNPSWQARADFYVTCILSCLPWGGAELIEQVPEEIERVMAGLEAYLSIRRHTSDTGLSFFEEDDESGKGLVEKDF 765 MS+WK LLL+IG+ PEYG S D KDHIETCFGVIRRE+E S D V +++ CAEQ+PHKIPLYGTL+GLLNLENEDFV+K+VE+ FQ ALDSGNC+ IRIL+RF+T ++CSK++QP SL+VVFETLLSSAATTVDE+KGNPSWQ +ADFYV CILS LPWGG+EL EQVP+EIERV+ G++AYLSIR+++S +GL+FF + E L EKDF Sbjct: 1 MSNWKTLLLRIGEKGPEYGTSSDYKDHIETCFGVIRREIERSGDQVLPFLLQCAEQLPHKIPLYGTLIGLLNLENEDFVQKLVESVHANFQVALDSGNCNSIRILLRFMTSLLCSKVIQPASLIVVFETLLSSAATTVDEEKGNPSWQPQADFYVICILSSLPWGGSELAEQVPDEIERVLVGIQAYLSIRKNSSTSGLNFF-HNGEFESSLAEKDF 216
BLAST of CX671678 vs. ExPASy Swiss-Prot
Match: NCBP1_ORYSJ (Nuclear cap-binding protein subunit 1 OS=Oryza sativa subsp. japonica GN=ABH1 PE=2 SV=1) HSP 1 Score: 275.789 bits (704), Expect = 1.830e-73 Identity = 128/216 (59.26%), Postives = 164/216 (75.93%), Query Frame = 1 Query: 118 SSWKNLLLKIGDNCPEYGNSDDLKDHIETCFGVIRRELEHSFDDVPHYIINCAEQIPHKIPLYGTLVGLLNLENEDFVKKVVETTQRKFQDALDSGNCDRIRILMRFLTVMMCSKILQPGSLVVVFETLLSSAATTVDEDKGNPSWQARADFYVTCILSCLPWGGAELIEQVPEEIERVMAGLEAYLSIRRHTSDTGLSFFEEDDESGKGLVEKDF 765 + W+ LLL+IGD CPEYG S D K+HIETC+GV+ RE EHS D + +++ CA+Q+PHKIP +G L+GL+NLENEDF K +V+TT QDAL + N DRIRIL+RFL +MCSK++ P S++ FE LLSSAAT +DE+ GNPSWQ RADFYV CIL+ LPWGG+EL EQVP+E ERV+ G+++Y+SIRRH D S FE D+ G +KDF Sbjct: 3 AGWRTLLLRIGDRCPEYGGSADHKEHIETCYGVLCREYEHSKDAMFEFLLQCADQLPHKIPFFGVLIGLINLENEDFSKGIVDTTHANLQDALHNENRDRIRILLRFLCGLMCSKVVLPNSIIETFEALLSSAATILDEETGNPSWQPRADFYVYCILASLPWGGSELFEQVPDEFERVLVGIQSYISIRRHFDDIAFSVFETDE--GNSPNKKDF 216
BLAST of CX671678 vs. ExPASy Swiss-Prot
Match: NCBP1_HUMAN (Nuclear cap-binding protein subunit 1 OS=Homo sapiens GN=NCBP1 PE=1 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 8.918e-20 Identity = 60/190 (31.58%), Postives = 103/190 (54.21%), Query Frame = 1 Query: 127 KNLLLKIGDNCPEYGNSDDLKDHIETCFGVIRRELEHSFDDVPHYIINCAEQIPHKIPLYGTLVGLLNLENEDFVKKVVETTQRKFQDALDSGNCDRIRILMRFLTVMMCSKILQPGSLVVVFETLLSSAATTVDEDKGNPSWQARADFYVTCILSCLPWGGAELIEQVPEEIERVMAGLEAYLSIRRHT 696 ++L+ K+G+ ++ L+ ++E GV+ +L + + + A +P K+ +Y TLVGLLN N +F + VE R+ +++L + N + L+RFL+ ++ ++ S+V +FE +S T +ED Q R D+YV LS LPW G EL E+ E++R+ A E+YL R+ T Sbjct: 32 ESLICKVGEK-----SACSLESNLEGLAGVLEADLPNYKSKILRLLCTVARLLPEKLTIYTTLVGLLNARNYNFGGEFVEAMIRQLKESLKANNYNEAVYLVRFLSDLVNCHVIAAPSMVAMFENFVS---VTQEEDVP----QVRRDWYVYAFLSSLPWVGKELYEKKDAEMDRIFANTESYLKRRQKT 209
BLAST of CX671678 vs. ExPASy Swiss-Prot
Match: NCBP1_RAT (Nuclear cap-binding protein subunit 1 OS=Rattus norvegicus GN=Ncbp1 PE=1 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.987e-19 Identity = 59/190 (31.05%), Postives = 103/190 (54.21%), Query Frame = 1 Query: 127 KNLLLKIGDNCPEYGNSDDLKDHIETCFGVIRRELEHSFDDVPHYIINCAEQIPHKIPLYGTLVGLLNLENEDFVKKVVETTQRKFQDALDSGNCDRIRILMRFLTVMMCSKILQPGSLVVVFETLLSSAATTVDEDKGNPSWQARADFYVTCILSCLPWGGAELIEQVPEEIERVMAGLEAYLSIRRHT 696 ++L+ K+G+ ++ L+ ++E GV+ +L + + + A +P K+ +Y TLVGLLN N +F + VE R+ +++L + N + L+RFL+ ++ ++ S+V +FE +S T +ED Q R D+YV LS LPW G EL E+ E++R+ + E+YL R+ T Sbjct: 32 ESLICKVGEK-----SACSLESNLEGLAGVLEADLPNYKSKILRLLCTVARLLPEKLTIYTTLVGLLNARNYNFGGEFVEAMIRQLKESLKANNYNEAVYLVRFLSDLVNCHVIAAPSMVAMFENFVS---VTQEEDVP----QVRRDWYVYAFLSSLPWVGKELYEKKDAEMDRIFSSTESYLKRRQKT 209
BLAST of CX671678 vs. ExPASy Swiss-Prot
Match: NCBP1_MOUSE (Nuclear cap-binding protein subunit 1 OS=Mus musculus GN=Ncbp1 PE=1 SV=2) HSP 1 Score: 95.5153 bits (236), Expect = 3.389e-19 Identity = 59/190 (31.05%), Postives = 103/190 (54.21%), Query Frame = 1 Query: 127 KNLLLKIGDNCPEYGNSDDLKDHIETCFGVIRRELEHSFDDVPHYIINCAEQIPHKIPLYGTLVGLLNLENEDFVKKVVETTQRKFQDALDSGNCDRIRILMRFLTVMMCSKILQPGSLVVVFETLLSSAATTVDEDKGNPSWQARADFYVTCILSCLPWGGAELIEQVPEEIERVMAGLEAYLSIRRHT 696 ++L+ K+G+ ++ L+ ++E GV+ +L + + + A +P K+ +Y TLVGLLN N +F + VE R+ +++L + N + L+RFL+ ++ ++ S+V +FE +S T +ED Q R D+YV LS LPW G EL E+ E++R+ + E+YL R+ T Sbjct: 32 ESLICKVGEK-----SACSLESNLEGLAGVLEADLPNYKSKILRLLCTVARLLPEKLTIYTTLVGLLNARNYNFGGEFVEAMIRQLKESLKANNYNEAVYLVRFLSDLVNCHVIAAPSMVAMFENFVS---VTQEEDVP----QVRRDWYVYAFLSSLPWVGKELYEKKDAEMDRIFSTTESYLKRRQKT 209
BLAST of CX671678 vs. ExPASy Swiss-Prot
Match: NCBP1_ANOGA (Nuclear cap-binding protein subunit 1 OS=Anopheles gambiae GN=Cbp80 PE=3 SV=4) HSP 1 Score: 90.5077 bits (223), Expect = 1.090e-17 Identity = 54/201 (26.87%), Postives = 104/201 (51.74%), Query Frame = 1 Query: 127 KNLLLKIGDNCPEYGNSDDLKDHIETCFGVIRRELEHSFDDVPHYIINCAEQIPHKIPLYGTLVGLLNLENEDFVKKVVETTQRKFQDALDSGNCDRIRILMRFLTVMMCSKILQPGSLVVVFETLLSSAATTVDEDKGNPSWQARADFYVTCILSCLPWGGAELIEQVPEEIERVMAGLEAYLSIRRHTSDTGLSFFEED 729 + L+L++G+N ++ L+ ++E V+ +L + + + +C ++P K +Y T+VGL+N +N +F + VE + F+D+L D R +RFL ++ ++ SL+ + ++++ +A +ED Q R D+YV +LS LPW G EL E+ +E ++ +E +L+ R L + D Sbjct: 35 ETLILRVGEN-----STSSLESNLEGLVSVLESDLGNFRSKILRILSDCPIKMPEKCTIYSTMVGLMNAKNYNFGGEFVEYMVKTFKDSLKQCQWDAARYALRFLADLVNCHVISTNSLLQLLDSMVDAA----NEDNVP---QVRRDWYVFAVLSTLPWVGRELYEKKESALENLLVRIEVFLNKRTKKHHNALRVWSVD 223
BLAST of CX671678 vs. ExPASy Swiss-Prot
Match: NCBP1_XENTR (Nuclear cap-binding protein subunit 1 OS=Xenopus tropicalis GN=ncbp1 PE=2 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.424e-17 Identity = 56/188 (29.79%), Postives = 101/188 (53.72%), Query Frame = 1 Query: 127 KNLLLKIGDNCPEYGNSDDLKDHIETCFGVIRRELEHSFDDVPHYIINCAEQIPHKIPLYGTLVGLLNLENEDFVKKVVETTQRKFQDALDSGNCDRIRILMRFLTVMMCSKILQPGSLVVVFETLLSSAATTVDEDKGNPSWQARADFYVTCILSCLPWGGAELIEQVPEEIERVMAGLEAYLSIRR 690 ++L+ ++G+ ++ L+ ++E GV+ +L + + + + A +P K+ +Y TLVGLLN N +F + VE R ++ + + L+RFL ++ ++ S+V +FE S T +ED Q R+D+YV +LS LPW G EL E+ E++R+++ +EAYL R+ Sbjct: 32 ESLICRVGEK-----STSSLESNLEGLAGVLEADLPNYKSKILRILCSVARTLPEKMTVYTTLVGLLNARNYNFGGEFVEAMIRHLKETIKLNAYNEAVYLVRFLCDLVNCHVIAAPSMVAMFE---SFVGVTQEEDIP----QVRSDWYVYAVLSSLPWVGKELYEKKDVEMDRILSQIEAYLKQRQ 207
BLAST of CX671678 vs. ExPASy Swiss-Prot
Match: NBP1A_XENLA (Nuclear cap-binding protein subunit 1-A OS=Xenopus laevis GN=ncbp1-A PE=2 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.429e-17 Identity = 56/188 (29.79%), Postives = 100/188 (53.19%), Query Frame = 1 Query: 127 KNLLLKIGDNCPEYGNSDDLKDHIETCFGVIRRELEHSFDDVPHYIINCAEQIPHKIPLYGTLVGLLNLENEDFVKKVVETTQRKFQDALDSGNCDRIRILMRFLTVMMCSKILQPGSLVVVFETLLSSAATTVDEDKGNPSWQARADFYVTCILSCLPWGGAELIEQVPEEIERVMAGLEAYLSIRR 690 ++L+ ++G+ ++ L+ ++E GV+ +L + + + A +P K+ +Y TLVGLLN N +F + VE R ++ + L+RFL+ ++ ++ S+V +FE S T +ED Q R+D+YV +LS LPW G EL E+ E++R+++ +EAYL R+ Sbjct: 32 ESLICRVGEK-----STSSLESNLEGLAGVLEADLPNYKSKILRILCFVARLLPEKMSVYSTLVGLLNARNYNFGGEFVEAMIRHLKETIKLNAYSEAVYLVRFLSDLVNCHVIAAPSMVAMFE---SFVGVTQEEDIP----QVRSDWYVYAVLSSLPWVGKELYEKKDVEMDRILSQIEAYLKQRQ 207
BLAST of CX671678 vs. ExPASy Swiss-Prot
Match: NCBP1_AEDAE (Nuclear cap-binding protein subunit 1 OS=Aedes aegypti GN=Cbp80 PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 4.143e-17 Identity = 53/201 (26.37%), Postives = 103/201 (51.24%), Query Frame = 1 Query: 127 KNLLLKIGDNCPEYGNSDDLKDHIETCFGVIRRELEHSFDDVPHYIINCAEQIPHKIPLYGTLVGLLNLENEDFVKKVVETTQRKFQDALDSGNCDRIRILMRFLTVMMCSKILQPGSLVVVFETLLSSAATTVDEDKGNPSWQARADFYVTCILSCLPWGGAELIEQVPEEIERVMAGLEAYLSIRRHTSDTGLSFFEED 729 + L+L++G+N +S L+ ++E V+ +L + + + C ++P K +Y T+VGL+N +N +F + V+ + F+++L D R +RFL+ ++ ++ SL+ + + ++ +A +ED Q R D+YV +LS LPW G EL E+ +E ++ +E +L+ R L + D Sbjct: 35 ETLILRVGEN-----SSSSLESNLEGLVSVLESDLGNFRSKILRILSECPIKMPEKCTIYSTMVGLMNAKNYNFGGEFVDHMVKTFKESLKQCRWDAARYALRFLSDLVNCHVISTNSLLQLLDNMVDAA----NEDSVP---QVRRDWYVFAVLSTLPWVGRELYEKKESALENLLVRIEVFLNKRTKKHHNSLRVWSVD 223
BLAST of CX671678 vs. ExPASy Swiss-Prot
Match: NCBP1_CHICK (Nuclear cap-binding protein subunit 1 OS=Gallus gallus GN=NCBP1 PE=2 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 5.410e-17 Identity = 55/188 (29.26%), Postives = 100/188 (53.19%), Query Frame = 1 Query: 127 KNLLLKIGDNCPEYGNSDDLKDHIETCFGVIRRELEHSFDDVPHYIINCAEQIPHKIPLYGTLVGLLNLENEDFVKKVVETTQRKFQDALDSGNCDRIRILMRFLTVMMCSKILQPGSLVVVFETLLSSAATTVDEDKGNPSWQARADFYVTCILSCLPWGGAELIEQVPEEIERVMAGLEAYLSIRR 690 ++L+ ++G+ ++ L+ ++E GV+ +L + + + A +P K+ +Y TLVGLLN N +F + VE R+ ++ L + L+RFL+ ++ ++ S+V +FE +S T +ED Q R D+Y+ LS LPW G EL E+ E++R+++ E+YL R+ Sbjct: 34 ESLICRVGEK-----SNSSLESNLEGLAGVLEADLPNYKSKILRILCTVARLLPEKLTVYTTLVGLLNARNYNFGGEFVEAMIRQLKECLKVNMYNEAVHLVRFLSDLVNCHVIAAPSMVAMFENFVS---VTQEEDVP----QVRCDWYIFAFLSSLPWVGKELYEKKDAEMDRLLSQTESYLKRRQ 209 The following BLAST results are available for this feature:
BLAST of CX671678 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 26
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Sequences
The
following sequences are available for this feature:
EST sequence >CX671678 ID=CX671678; Name=CX671678; organism=Citrus sinensis; type=EST; length=765bpback to top |