CX671668

Overview
NameCX671668
Unique NameCX671668
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length798
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CX671668 vs. ExPASy Swiss-Prot
Match: 7SB1_SOYBN (Basic 7S globulin OS=Glycine max GN=BG PE=1 SV=2)

HSP 1 Score: 83.1889 bits (204), Expect = 1.844e-15
Identity = 75/256 (29.30%), Postives = 107/256 (41.80%), Query Frame = 3 
Query:   75 SPSSQFLLFLCFIFLVNASVNSVAIPVVKDVSTLQYVAKIHHGVSQVPINLVLDLGGPLTWVDCDXXXXXXXXXXXXXXXXXXIQCSRSGK----SPVPGNGSDTTTNTCGVFTQNGISGLVTTGDLAEDTIAVR----SELEDPSITAVDQFLFSCAPTF-XXXXXXXXXXXXXXXXXXPISLPSQLATGIGHQRKFFMCLS---SSNGVVL---------SHHTSTTKLPLMYTPL-IGKSQDYFINVKSIKIN 776
            S S  FL FL         +N V +PV  D ST  + A +      + + +++DL G   WV+C+                   QCSR+      S    +      NTCG+ + N I+     G+L ED +A+     S  +   +  V QFLFSCAP+F                   PISLP+QLA+  G QR+F  CLS   +S G ++                   L +TPL I    +Y + V SI+IN
Sbjct:   12 SLSCSFLFFLSDSVTPTKPINLVVLPVQNDGSTGLHWANLQKRTPLMQVPVLVDLNGNHLWVNCE---QQYSSKTYQAPFCHSTQCSRANTHQCLSCPAASRPGCHKNTCGLMSTNPITQQTGLGELGEDVLAIHATQGSTQQLGPLVTVPQFLFSCAPSFLVQKGLPRNTQGVAGLGHAPISLPNQLASHFGLQRQFTTCLSRYPTSKGAIIFGDAPNNMRQFQNQDIFHDLAFTPLTITLQGEYNVRVNSIRIN 264
[Close]
BLAST of CX671668 vs. ExPASy Swiss-Prot
Match: 7SBG2_SOYBN (Basic 7S globulin 2 OS=Glycine max PE=1 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 5.931e-14
Identity = 67/237 (28.27%), Postives = 101/237 (42.62%), Query Frame = 3 
Query:  132 VNSVAIPVVKDVSTLQYVAKIHHGVSQVPINLVLDLGGPLTWVDCDXXXXXXXXXXXXXXXXXXIQCSRSGK----SPVPGNGSDTTTNTCGVFTQNGISGLVTTGDLAEDTIAVR----SELEDPSITAVDQFLFSCAPTF-XXXXXXXXXXXXXXXXXXPISLPSQLATGIGHQRKFFMCLS---SSNGVVL---------SHHTSTTKLPLMYTPLIGKSQ-DYFINVKSIKIN 776
            +N + +PV  D ST  + A +      + + +++DL G   WV+C+                   QCSR+      S    +      NTCG+ + N I+     G+L +D +A+     S  +   +  V QFLFSCAP+F                   PISLP+QLA+  G Q +F  CLS   +S G ++           H       L +TPL    Q +Y + V SI+IN
Sbjct:   38 INLLVLPVQNDASTGLHWANLQKRTPLMQVPVLVDLNGNHLWVNCE---QHYSSKTYQAPFCHSTQCSRANTHQCLSCPAASRPGCHKNTCGLMSTNPITQQTGLGELGQDVLAIHATQGSTQQLGPLVTVPQFLFSCAPSFLLQKGLPRNIQGVAGLGHAPISLPNQLASHFGLQHQFTTCLSRYPTSKGALIFGDAPNNMQQFHNQDIFHDLAFTPLTVTPQGEYNVRVSSIRIN 271
The following BLAST results are available for this feature:
BLAST of CX671668 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
7SB1_SOYBN1.844e-1529.30Basic 7S globulin OS=Glycine max GN=BG PE=1 SV=2[more]
7SBG2_SOYBN5.931e-1428.27Basic 7S globulin 2 OS=Glycine max PE=1 SV=1[more]
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Properties
Property NameValue
Genbank descriptionUCRCS10_12D10_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-12D10-H20-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671668 ID=CX671668; Name=CX671668; organism=Citrus sinensis; type=EST; length=798bp
CCTCGATCTATCTTTACCAAAATCTCCTCAGTCCTCTCTCTTCCTGTCTC
TGCGTAACTTTTACTTCCATGGCTTCCCCTTCTTCTCAATTCCTTCTCTT
TCTTTGCTTCATTTTTCTTGTTAACGCAAGTGTTAATTCTGTTGCCATCC
CCGTCGTCAAAGATGTGTCAACTTTGCAATACGTTGCCAAGATTCATCAC
GGCGTTTCGCAAGTTCCCATCAACCTTGTTCTTGATCTCGGCGGTCCGTT
GACCTGGGTCGATTGTGATTCTTCTGCCGACGTGTCGTCGTCATCATCCC
GTCGGTTGATTCCAAGTCAGTCAATCCAGTGCTCAAGATCTGGAAAATCC
CCTGTTCCTGGGAATGGTAGCGACACAACTACTAATACATGCGGTGTCTT
CACACAAAATGGCATCTCAGGATTGGTCACTACAGGGGATTTGGCGGAAG
ACACCATAGCCGTTCGATCAGAACTAGAGGACCCATCAATCACAGCCGTT
GATCAGTTCCTCTTCTCTTGTGCGCCAACTTTTCTCCTCCAAGGCCTTGC
AAGGGGTGCCAGAGGAATGCTGGGCCTGGGAAGGGCTCCAATTTCACTAC
CGTCACAGCTCGCCACCGGAATCGGCCATCAAAGAAAGTTCTTTATGTGT
CTCTCATCTTCAAACGGTGTCGTATTGTCTCACCATACAAGCACAACAAA
GTTGCCACTGATGTACACACCTCTTATTGGTAAGTCTCAAGATTACTTCA
TTAATGTCAAATCCATCAAAATAAATGGCAACCCATTATCGGTTACTA
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