CX671582
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX671582 vs. ExPASy Swiss-Prot
Match: SVP_ARATH (MADS-box protein SVP OS=Arabidopsis thaliana GN=SVP PE=1 SV=1) HSP 1 Score: 217.624 bits (553), Expect = 6.013e-56 Identity = 112/157 (71.34%), Postives = 135/157 (85.99%), Query Frame = 1 Query: 196 MAREKIKIRKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVGVIIFSATGKLFESSSSSMKDIIARYNMHSSNISKLNHPSLELQL-ENSKYLSLSREIADKSRQLRQMRGEDLHGLTIEELQHLETMLEQGLSRVLQTKGDRIMNEISTLERKG 663 MAREKI+IRKIDN TARQVTFSKRRRGLFKKAEELSVLCDA+V +IIFS+TGKLFE SSSMK+++ R+N+ S N+ KL+ PSLELQL ENS + +S+EIADKS +LRQMRGE+L GL IEELQ LE LE GL+RV++TK D+IM+EIS L++KG Sbjct: 1 MAREKIQIRKIDNATARQVTFSKRRRGLFKKAEELSVLCDADVALIIFSSTGKLFEFCSSSMKEVLERHNLQSKNLEKLDQPSLELQLVENSDHARMSKEIADKSHRLRQMRGEELQGLDIEELQQLEKALETGLTRVIETKSDKIMSEISELQKKG 157
BLAST of CX671582 vs. ExPASy Swiss-Prot
Match: JOIN_SOLLC (MADS-box protein JOINTLESS OS=Solanum lycopersicum GN=J PE=1 SV=1) HSP 1 Score: 215.698 bits (548), Expect = 2.285e-55 Identity = 112/157 (71.34%), Postives = 134/157 (85.35%), Query Frame = 1 Query: 196 MAREKIKIRKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVGVIIFSATGKLFESSSSSMKDIIARYNMHSSNISKLNHPSLELQL-ENSKYLSLSREIADKSRQLRQMRGEDLHGLTIEELQHLETMLEQGLSRVLQTKGDRIMNEISTLERKG 663 MAREKI+I+KIDN TARQVTFSKRRRGLFKKAEELSVLCDA+V +IIFS+TGKLF+ SSSSMK I+ R ++HS N+ KL+ PSLELQL ENS Y LS+EI++KS +LRQMRGE+L GL IEELQ LE LE GLSRV++ KGD+IM EI+ L++KG Sbjct: 1 MAREKIQIKKIDNSTARQVTFSKRRRGLFKKAEELSVLCDADVALIIFSSTGKLFDYSSSSMKQILERRDLHSKNLEKLDQPSLELQLVENSNYSRLSKEISEKSHRLRQMRGEELQGLNIEELQQLERSLETGLSRVIERKGDKIMREINQLQQKG 157
BLAST of CX671582 vs. ExPASy Swiss-Prot
Match: MAD22_ORYSJ (MADS-box transcription factor 22 OS=Oryza sativa subsp. japonica GN=MADS22 PE=2 SV=1) HSP 1 Score: 187.193 bits (474), Expect = 8.703e-47 Identity = 94/157 (59.87%), Postives = 124/157 (78.98%), Query Frame = 1 Query: 196 MAREKIKIRKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVGVIIFSATGKLFESSSSSMKDIIARYNMHSSNISKLNHPSLELQLENSKYLSLSREIADKSRQLRQMRGEDLHGLTIEELQHLETMLEQGLSRVLQTKGDRIMNEISTLERKGA 666 MARE+ +I++I++ ARQVTFSKRRRGLFKKAEELSVLCDA+V +I+FS+TGKL +SSSM +II +YN HS+N+ K PSL+L LE+SKY L+ ++A+ S +LRQMRGE+L GL+I+ELQ LE LE GL RV+ TK + M +IS L+RK + Sbjct: 1 MARERREIKRIESAAARQVTFSKRRRGLFKKAEELSVLCDADVALIVFSSTGKLSHFASSSMNEIIDKYNTHSNNLGKAEQPSLDLNLEHSKYAHLNEQLAEASLRLRQMRGEELEGLSIDELQQLEKNLEAGLHRVMLTKDQQFMEQISELQRKSS 157
BLAST of CX671582 vs. ExPASy Swiss-Prot
Match: MAD47_ORYSJ (MADS-box transcription factor 47 OS=Oryza sativa subsp. japonica GN=MADS47 PE=1 SV=2) HSP 1 Score: 181.03 bits (458), Expect = 6.237e-45 Identity = 93/154 (60.39%), Postives = 119/154 (77.27%), Query Frame = 1 Query: 202 REKIKIRKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVGVIIFSATGKLFESSSSSMKDIIARYNMHSSNISKLNHPSLELQLENSKYLS-LSREIADKSRQLRQMRGEDLHGLTIEELQHLETMLEQGLSRVLQTKGDRIMNEISTLERK 660 RE+I IR+IDN+ ARQVTFSKRRRGLFKKAEELS+LCDAEVG+++FSATGKLF+ +S+SM+ II RYN HS + + L+LQ E+S + L E+A+ S +LRQMRGE+LH L +E+LQ LE LE GL VL+TK +I++EI LERK Sbjct: 22 RERIAIRRIDNLAARQVTFSKRRRGLFKKAEELSILCDAEVGLVVFSATGKLFQFASTSMEQIIDRYNSHSKTLQRAEPSQLDLQGEDSSTCARLKEELAETSLRLRQMRGEELHRLNVEQLQELEKSLESGLGSVLKTKSKKILDEIDGLERK 175
BLAST of CX671582 vs. ExPASy Swiss-Prot
Match: MAD55_ORYSJ (MADS-box transcription factor 55 OS=Oryza sativa subsp. japonica GN=MADS55 PE=2 SV=2) HSP 1 Score: 171.4 bits (433), Expect = 4.942e-42 Identity = 94/179 (52.51%), Postives = 125/179 (69.83%), Query Frame = 1 Query: 196 MAREKIKIRKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVGVIIFSATGKLFESSSSSMKDIIARYNMHSSNISKLN-HPSLE----------------------LQLENSKYLSLSREIADKSRQLRQMRGEDLHGLTIEELQHLETMLEQGLSRVLQTKGDRIMNEISTLERKG 663 MARE+ +IR+I++ ARQVTFSKRRRGLFKKAEEL+VLCDA+V +++FS+TGKL + +SS+M +II +Y HS N+ K + PS++ LQLE+SK SL+ ++A+ S QLRQMRGE+L GL++EELQ +E LE GL RVL TK + M EIS L+RKG Sbjct: 1 MARERREIRRIESAAARQVTFSKRRRGLFKKAEELAVLCDADVALVVFSSTGKLSQFASSNMNEIIDKYTTHSKNLGKTDKQPSIDLNFFLIILLRTYTNSYAYIHLLLQLEHSKCSSLNEQLAEASLQLRQMRGEELEGLSVEELQQMEKNLEAGLQRVLCTKDQQFMQEISELQRKG 179
BLAST of CX671582 vs. ExPASy Swiss-Prot
Match: MAD27_ORYSJ (MADS-box transcription factor 27 OS=Oryza sativa subsp. japonica GN=MADS27 PE=2 SV=2) HSP 1 Score: 145.976 bits (367), Expect = 2.224e-34 Identity = 77/157 (49.04%), Postives = 106/157 (67.52%), Query Frame = 1 Query: 196 MAREKIKIRKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVGVIIFSATGKLFESSSSSMKDIIARYNMHSSNISKLNHPSLELQLENSKYLSLSREIADKSRQLRQMRGEDLHGLTIEELQHLETMLEQGLSRVLQTKGDRIMNEISTLERKGA 666 M R KI IR+IDN T+RQVTFSKRR G+FKKA+EL++LCDAEVG++IFS+TG+L+E SS+SMK +I RY + +P+ EL+ + SL +++ + RQ+ GEDL GL ++ELQ LE LE L V K +++EI L RKG+ Sbjct: 1 MGRGKIVIRRIDNSTSRQVTFSKRRNGIFKKAKELAILCDAEVGLMIFSSTGRLYEYSSTSMKSVIDRYGKSKDEQQAVANPNSELKFWQREAASLRQQLHNLQENHRQLMGEDLSGLNVKELQSLENQLEISLRSVRTKKDHVLIDEIHELNRKGS 157
BLAST of CX671582 vs. ExPASy Swiss-Prot
Match: MAD23_ORYSJ (MADS-box transcription factor 23 OS=Oryza sativa subsp. japonica GN=MADS23 PE=2 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 9.342e-33 Identity = 73/155 (47.10%), Postives = 106/155 (68.39%), Query Frame = 1 Query: 196 MAREKIKIRKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVGVIIFSATGKLFESSSSSMKDIIARYNMHSSNISKLNHPSLELQLENSKYLSLSREIADKSRQLRQMRGEDLHGLTIEELQHLETMLEQGLSRVLQTKGDRIMNEISTLERK 660 M R KI+I++IDN T+RQVTFSKRR GLFKKA ELS+LCDAEVG+++FS+T +L++ +SSSMK II RYN + + + S E +L + SL +++ + RQ+ G+ L GL +E+LQ+LE+ LE L + K + +M++I L RK Sbjct: 1 MGRGKIEIKRIDNATSRQVTFSKRRSGLFKKARELSILCDAEVGLLVFSSTSRLYDFASSSMKSIIERYNETKEDPHQTMNASSEAKLWQQEAASLRQQLHNLQEYHRQLLGQQLSGLDVEDLQNLESKLEMSLKNIRLRKDNVMMDQIQELSRK 155
BLAST of CX671582 vs. ExPASy Swiss-Prot
Match: AGL21_ARATH (Agamous-like MADS-box protein AGL21 OS=Arabidopsis thaliana GN=AGL21 PE=1 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 6.695e-31 Identity = 72/155 (46.45%), Postives = 101/155 (65.16%), Query Frame = 1 Query: 196 MAREKIKIRKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVGVIIFSATGKLFESSSSSMKDIIARYNMHSSNISKLNHPSLELQLENSKYLSLSREIADKSRQLRQMRGEDLHGLTIEELQHLETMLEQGLSRVLQTKGDRIMNEISTLERK 660 M R KI I++ID+ T+RQVTFSKRR+GL KKA+EL++LCDAEVG+IIFS+TGKL++ +SSSMK +I RYN +L +P+ E++ + L +E+ RQM GE L+GL++ EL LE +E L + K + EI L +K Sbjct: 1 MGRGKIVIQRIDDSTSRQVTFSKRRKGLIKKAKELAILCDAEVGLIIFSSTGKLYDFASSSMKSVIDRYNKSKIEQQQLLNPASEVKFWQREAAVLRQELHALQENHRQMMGEQLNGLSVNELNSLENQIEISLRGIRMRKEQLLTQEIQELSQK 155
BLAST of CX671582 vs. ExPASy Swiss-Prot
Match: MAD57_ORYSJ (MADS-box transcription factor 57 OS=Oryza sativa subsp. japonica GN=MADS57 PE=2 SV=2) HSP 1 Score: 130.954 bits (328), Expect = 7.402e-30 Identity = 71/157 (45.22%), Postives = 103/157 (65.61%), Query Frame = 1 Query: 196 MAREKIKIRKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVGVIIFSATGKLFESSSSSMKDIIARYNMHSSNISKLNHPSLELQLENSKYLSLSREIADKSRQLRQMRGEDLHGLTIEELQHLETMLEQGLSRVLQTKGDRIMNEISTLERKGA 666 M R KI IR+IDN T+RQVTFSKRR GL KKA+ELS+LCDAEVG+++FS+TG+L+E SS++MK +I RY + N S E+++ + SL +++ + +Q+ GE+L GL + +LQ LE LE L + K + + +EI L KG+ Sbjct: 1 MGRGKIVIRRIDNSTSRQVTFSKRRNGLLKKAKELSILCDAEVGLVVFSSTGRLYEFSSTNMKTVIDRYTNAKEELLGGNATS-EIKIWQREAASLRQQLHNLQESHKQLMGEELSGLGVRDLQGLENRLEISLRNIRMRKDNLLKSEIEELHVKGS 156
BLAST of CX671582 vs. ExPASy Swiss-Prot
Match: AGL17_ARATH (Agamous-like MADS-box protein AGL17 OS=Arabidopsis thaliana GN=AGL17 PE=2 SV=2) HSP 1 Score: 129.798 bits (325), Expect = 1.649e-29 Identity = 69/155 (44.52%), Postives = 103/155 (66.45%), Query Frame = 1 Query: 196 MAREKIKIRKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVGVIIFSATGKLFESSSSSMKDIIARYNMHSSNISKLNHPSLELQLENSKYLSLSREIADKSRQLRQMRGEDLHGLTIEELQHLETMLEQGLSRVLQTKGDRIMNEISTLERK 660 M R KI I+KID+ T+RQVTFSKRR+GL KKA+EL++LCDAEV +IIFS T KL++ +SSS+K I R+N +L +P+ E++ + +L +E+ RQ+ G +L+GL+++ELQ++E+ LE L + + + NEI L RK Sbjct: 1 MGRGKIVIQKIDDSTSRQVTFSKRRKGLIKKAKELAILCDAEVCLIIFSNTDKLYDFASSSVKSTIERFNTAKMEEQELMNPASEVKFWQREAETLRQELHSLQENYRQLTGVELNGLSVKELQNIESQLEMSLRGIRMKREQILTNEIKELTRK 155 The following BLAST results are available for this feature:
BLAST of CX671582 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 120
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Sequences
The
following sequences are available for this feature:
EST sequence >CX671582 ID=CX671582; Name=CX671582; organism=Citrus sinensis; type=EST; length=778bpback to top |