CX671581
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX671581 vs. ExPASy Swiss-Prot
Match: JOIN_SOLLC (MADS-box protein JOINTLESS OS=Solanum lycopersicum GN=J PE=1 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 1.438e-27 Identity = 64/100 (64.00%), Postives = 80/100 (80.00%), Query Frame = -2 Query: 582 SSSSMKDIIARYNMHSSNISKLNHPSLELQL-ENSKYLSLSREIADKSRQLRQMRGEDLHGLTIEELQHLETMLEQGLSRVLQTKGDRIMNEISTLERKG 878 SSSSMK I+ R ++HS N+ KL+ PSLELQL ENS Y LS+EI++KS +LRQMRGE+L GL IEELQ LE LE GLSRV++ KGD+IM EI+ L++KG Sbjct: 58 SSSSMKQILERRDLHSKNLEKLDQPSLELQLVENSNYSRLSKEISEKSHRLRQMRGEELQGLNIEELQQLERSLETGLSRVIERKGDKIMREINQLQQKG 157
BLAST of CX671581 vs. ExPASy Swiss-Prot
Match: SVP_ARATH (MADS-box protein SVP OS=Arabidopsis thaliana GN=SVP PE=1 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.878e-27 Identity = 62/99 (62.63%), Postives = 81/99 (81.82%), Query Frame = -2 Query: 582 SSSMKDIIARYNMHSSNISKLNHPSLELQL-ENSKYLSLSREIADKSRQLRQMRGEDLHGLTIEELQHLETMLEQGLSRVLQTKGDRIMNEISTLERKG 875 SSSMK+++ R+N+ S N+ KL+ PSLELQL ENS + +S+EIADKS +LRQMRGE+L GL IEELQ LE LE GL+RV++TK D+IM+EIS L++KG Sbjct: 59 SSSMKEVLERHNLQSKNLEKLDQPSLELQLVENSDHARMSKEIADKSHRLRQMRGEELQGLDIEELQQLEKALETGLTRVIETKSDKIMSEISELQKKG 157
BLAST of CX671581 vs. ExPASy Swiss-Prot
Match: MAD22_ORYSJ (MADS-box transcription factor 22 OS=Oryza sativa subsp. japonica GN=MADS22 PE=2 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 2.807e-23 Identity = 54/100 (54.00%), Postives = 74/100 (74.00%), Query Frame = -2 Query: 579 SSSSMKDIIARYNMHSSNISKLNHPSLELQLENSKYLSLSREIADKSRQLRQMRGEDLHGLTIEELQHLETMLEQGLSRVLQTKGDRIMNEISTLERKGA 878 +SSSM +II +YN HS+N+ K PSL+L LE+SKY L+ ++A+ S +LRQMRGE+L GL+I+ELQ LE LE GL RV+ TK + M +IS L+RK + Sbjct: 58 ASSSMNEIIDKYNTHSNNLGKAEQPSLDLNLEHSKYAHLNEQLAEASLRLRQMRGEELEGLSIDELQQLEKNLEAGLHRVMLTKDQQFMEQISELQRKSS 157
BLAST of CX671581 vs. ExPASy Swiss-Prot
Match: MAD55_ORYSJ (MADS-box transcription factor 55 OS=Oryza sativa subsp. japonica GN=MADS55 PE=2 SV=2) HSP 1 Score: 93.2041 bits (230), Expect = 2.082e-18 Identity = 55/122 (45.08%), Postives = 74/122 (60.66%), Query Frame = -2 Query: 582 SSSSMKDIIARYNMHSSNISKLN-HPSLEL----------------------QLENSKYLSLSREIADKSRQLRQMRGEDLHGLTIEELQHLETMLEQGLSRVLQTKGDRIMNEISTLERKG 878 +SS+M +II +Y HS N+ K + PS++L QLE+SK SL+ ++A+ S QLRQMRGE+L GL++EELQ +E LE GL RVL TK + M EIS L+RKG Sbjct: 58 ASSNMNEIIDKYTTHSKNLGKTDKQPSIDLNFFLIILLRTYTNSYAYIHLLLQLEHSKCSSLNEQLAEASLQLRQMRGEELEGLSVEELQQMEKNLEAGLQRVLCTKDQQFMQEISELQRKG 179
BLAST of CX671581 vs. ExPASy Swiss-Prot
Match: MAD47_ORYSJ (MADS-box transcription factor 47 OS=Oryza sativa subsp. japonica GN=MADS47 PE=1 SV=2) HSP 1 Score: 91.2781 bits (225), Expect = 7.911e-18 Identity = 49/99 (49.49%), Postives = 67/99 (67.68%), Query Frame = -2 Query: 585 SSSSMKDIIARYNMHSSNISKLNHPSLELQLENSKYLS-LSREIADKSRQLRQMRGEDLHGLTIEELQHLETMLEQGLSRVLQTKGDRIMNEISTLERK 878 +S+SM+ II RYN HS + + L+LQ E+S + L E+A+ S +LRQMRGE+LH L +E+LQ LE LE GL VL+TK +I++EI LERK Sbjct: 77 ASTSMEQIIDRYNSHSKTLQRAEPSQLDLQGEDSSTCARLKEELAETSLRLRQMRGEELHRLNVEQLQELEKSLESGLGSVLKTKSKKILDEIDGLERK 175 The following BLAST results are available for this feature:
BLAST of CX671581 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX671581 ID=CX671581; Name=CX671581; organism=Citrus sinensis; type=EST; length=879bpback to top |