CX671542
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX671542 vs. ExPASy Swiss-Prot
Match: FLA17_ARATH (Fasciclin-like arabinogalactan protein 17 OS=Arabidopsis thaliana GN=FLA17 PE=2 SV=1) HSP 1 Score: 400.208 bits (1027), Expect = 8.052e-111 Identity = 204/277 (73.65%), Postives = 223/277 (80.51%), Query Frame = -1 Query: 52 SVQQDFNNRRNLRSISAVRPEGAPEVDPRTNRLKKPTPASKPGSSPALPVYYAMXXXXXXXXXXXXXXXXPHHHFNGEKQVKDFIQTLLHYGGYNEMADILVNLTSLATEMGRLVSEGYVLTVLAPNDEAMAKLTTDQLSEPGAPEQIIYYHVIPEYQTEESMYNAVRRFGKISYDTLRLPHKVLAQEADGSVKFGHGDGSAYLFDPDIYTDGRISVQGIDGVLFPPEETSTKLSESKKNVKVAVKQKPATRRGKLLEVACQMLGAFGQDSHFSTCQ 882 SVQ+DFN RR+L+SISAV PEGAPEVDPRTNRLKKP GS PALP+ AM HHF+GE QVKDFI TLLHYGGYNEMADILVNLTSLATEMGRLVSEGYVLTVLAPNDEAMAKLTTDQLSEPGAPEQI+YYH+IPEYQTEESMYN+VRRFGK+ +DTLR PHKV A+EADGSVKFG G+ SAYLFDPDIYTDGRISVQGIDGVLFP EE E ++VK VK+ RRGKLLEVAC MLGAFG+D++ S C+ Sbjct: 188 SVQEDFNRRRSLQSISAVLPEGAPEVDPRTNRLKKPAAPVPAGSPPALPIQSAMAPGPSLAPAPAPGPGGKQHHFDGEAQVKDFIHTLLHYGGYNEMADILVNLTSLATEMGRLVSEGYVLTVLAPNDEAMAKLTTDQLSEPGAPEQIVYYHIIPEYQTEESMYNSVRRFGKVKFDTLRFPHKVAAKEADGSVKFGDGEKSAYLFDPDIYTDGRISVQGIDGVLFPQEE------EVVESVKKPVKKIVQPRRGKLLEVACSMLGAFGKDTYLSKCR 458
BLAST of CX671542 vs. ExPASy Swiss-Prot
Match: FLA16_ARATH (Fasciclin-like arabinogalactan protein 16 OS=Arabidopsis thaliana GN=FLA16 PE=2 SV=1) HSP 1 Score: 399.438 bits (1025), Expect = 1.373e-110 Identity = 208/277 (75.09%), Postives = 225/277 (81.23%), Query Frame = -1 Query: 52 SVQQDFNNRRNLRSISAVRPEGAPEVDPRTNRLKKPTPASKPGSSPALPVYYAMXXXXXXXXXXXXXXXXPHHHFNGEKQVKDFIQTLLHYGGYNEMADILVNLTSLATEMGRLVSEGYVLTVLAPNDEAMAKLTTDQLSEPGAPEQIIYYHVIPEYQTEESMYNAVRRFGKISYDTLRLPHKVLAQEADGSVKFGHGDGSAYLFDPDIYTDGRISVQGIDGVLFPPEETSTKLSESKKNVKVAVKQKPATRRGKLLEVACQMLGAFGQDSHFSTCQ 882 SVQ+DFN RR+LRSISAV PEGAPEVDPRT+RLKKP+PA G+ P LP+Y AM P HFNG+ QVKDFI TLLHYGGYNEMADILVNLTSLATEMGRLVSEGYVLTVLAPNDEAMAKLTTDQLSEPGAPEQI+YYH+IPEYQTEESMYNAVRRFGK+ YD+LR PHKVLAQEADGSVKFGHGDGSAYLFDPDIYTDGRISVQGIDGVLFP EET +E K V VK+ +RRGKL+EVAC+M+G S F CQ Sbjct: 177 SVQEDFNRRRSLRSISAVIPEGAPEVDPRTHRLKKPSPAVPAGAPPVLPIYDAMSPGPSLAPAPAPGPGGPRGHFNGDAQVKDFIHTLLHYGGYNEMADILVNLTSLATEMGRLVSEGYVLTVLAPNDEAMAKLTTDQLSEPGAPEQIMYYHIIPEYQTEESMYNAVRRFGKVKYDSLRFPHKVLAQEADGSVKFGHGDGSAYLFDPDIYTDGRISVQGIDGVLFPKEETPA--TEIKPAAPV-VKKVSKSRRGKLMEVACRMMG-----SRFIPCQ 445
BLAST of CX671542 vs. ExPASy Swiss-Prot
Match: FLA15_ARATH (Fasciclin-like arabinogalactan protein 15 OS=Arabidopsis thaliana GN=FLA15 PE=2 SV=1) HSP 1 Score: 397.512 bits (1020), Expect = 5.219e-110 Identity = 209/277 (75.45%), Postives = 221/277 (79.78%), Query Frame = -1 Query: 52 SVQQDFNNRRNLRSISAVRPEGAPEVDPRTNRLKKPTPASKPGSSPALPVYYAMXXXXXXXXXXXXXXXXPHHHFNGEKQVKDFIQTLLHYGGYNEMADILVNLTSLATEMGRLVSEGYVLTVLAPNDEAMAKLTTDQLSEPGAPEQIIYYHVIPEYQTEESMYNAVRRFGKISYDTLRLPHKVLAQEADGSVKFGHGDGSAYLFDPDIYTDGRISVQGIDGVLFPPEETSTKLSESKKNVKVAVKQKPATRRGKLLEVACQMLGAFGQDSHFSTCQ 882 SVQ+DFN RR+LRSI+AV PEGAPEVDPRT+RLKK G+ P LPVY AM P HHFNGE QVKDFI TLLHYGGYNEMADILVNLTSLATEMGRLVSEGYVLTVLAPNDEAMAKLTTDQLSEPGAPEQI+YYH+IPEYQTEESMYN+VRRFGKI YD+LR PHKV AQEADGSVKFGHGDGSAYLFDPDIYTDGRISVQGIDGVLFP E+T E K V V VK+ P RRGKL+EVAC MLG S F TCQ Sbjct: 169 SVQEDFNRRRSLRSIAAVLPEGAPEVDPRTHRLKKKPAPIPAGAPPVLPVYDAMSPGPSLAPAPAPGPGGPRHHFNGEAQVKDFIHTLLHYGGYNEMADILVNLTSLATEMGRLVSEGYVLTVLAPNDEAMAKLTTDQLSEPGAPEQIMYYHIIPEYQTEESMYNSVRRFGKIRYDSLRFPHKVEAQEADGSVKFGHGDGSAYLFDPDIYTDGRISVQGIDGVLFPEEKTPV---EKKTGVPV-VKKAPKPRRGKLMEVACTMLG-----SQFPTCQ 436
BLAST of CX671542 vs. ExPASy Swiss-Prot
Match: FLA18_ARATH (Fasciclin-like arabinogalactan protein 18 OS=Arabidopsis thaliana GN=FLA18 PE=2 SV=1) HSP 1 Score: 390.578 bits (1002), Expect = 6.380e-108 Identity = 205/278 (73.74%), Postives = 219/278 (78.78%), Query Frame = -1 Query: 55 SVQQDFNNRRNLRSISAVRPEGAPEVDPRTNRLKKP-TPASKP-GSSPALPVYYAMXXXXXXXXXXXXXXXXPHHHFNGEKQVKDFIQTLLHYGGYNEMADILVNLTSLATEMGRLVSEGYVLTVLAPNDEAMAKLTTDQLSEPGAPEQIIYYHVIPEYQTEESMYNAVRRFGKISYDTLRLPHKVLAQEADGSVKFGHGDGSAYLFDPDIYTDGRISVQGIDGVLFPPEETSTKLSESKKNVKVAVKQKPATRRGKLLEVACQMLGAFGQDSHFSTC 882 SVQ+DFN RRNLRSISAV PEGAPE+DPRTNRLKK T S P GS P LP+ AM H HFNG+ QVKDFI TLLHYGGYNEMADILVNLTSLATEMGRLVSEGYVLTVLAPNDEAM KLTTDQLSEPGAPEQI+YYH+IPEYQTEESMYN+VRRFGK+ Y+TLR PHKV A+EADGSVKFG GD SAYLFDPDIYTDGRISVQGIDGVLFP E K E+ K VK+ RRGKLLEVAC MLGA G+DS+ S C Sbjct: 189 SVQEDFNRRRNLRSISAVLPEGAPEIDPRTNRLKKSATAVSVPAGSPPVLPIESAMAPGPSLAPAPAPGPGGAHKHFNGDAQVKDFIHTLLHYGGYNEMADILVNLTSLATEMGRLVSEGYVLTVLAPNDEAMGKLTTDQLSEPGAPEQIMYYHIIPEYQTEESMYNSVRRFGKVKYETLRFPHKVGAKEADGSVKFGSGDRSAYLFDPDIYTDGRISVQGIDGVLFPEE----KEEETVKKPTGPVKKVVQPRRGKLLEVACSMLGAIGKDSYLSRC 462 The following BLAST results are available for this feature:
BLAST of CX671542 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX671542 ID=CX671542; Name=CX671542; organism=Citrus sinensis; type=EST; length=882bpback to top |