CX671521
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX671521 vs. ExPASy Swiss-Prot
Match: ERG1_PANGI (Squalene monooxygenase OS=Panax ginseng PE=2 SV=1) HSP 1 Score: 221.09 bits (562), Expect = 5.386e-57 Identity = 105/128 (82.03%), Postives = 120/128 (93.75%), Query Frame = 2 Query: 386 LAHTLGKDGRRVHVIERDVTEPDRIVGELLQPGGYLKLVELGLEDCVEEIDAQQVLGYALFKDGKSTRLSYPLEKFHADVSGRSFYNGRFIQRMREKAASRPNVRLEQGTVTSLLEENGTIKGVQYKT 769 LA+TL DGRRVHVIERD+TE DRIVGELLQPGGYLKL+ELGLEDCV EIDAQ+V GYAL+ DGK+TRLSYPLEKFH+DV+GRSF+NGRF+QRMREKAAS PNVR+EQGTVTSL+E+ G++KGVQYKT Sbjct: 89 LAYTLANDGRRVHVIERDLTEQDRIVGELLQPGGYLKLIELGLEDCVNEIDAQRVFGYALYMDGKNTRLSYPLEKFHSDVAGRSFHNGRFVQRMREKAASLPNVRMEQGTVTSLVEKKGSVKGVQYKT 216
BLAST of CX671521 vs. ExPASy Swiss-Prot
Match: ERG11_ARATH (Squalene monooxygenase 1,1 OS=Arabidopsis thaliana GN=SQP1,1 PE=2 SV=2) HSP 1 Score: 165.236 bits (417), Expect = 3.507e-40 Identity = 81/129 (62.79%), Postives = 101/129 (78.29%), Query Frame = 2 Query: 386 LAHTLGKDGRRVHVIERDVTEPDRIVGELLQPGGYLKLVELGLEDCVEEIDAQQVLGYALFKDGKSTRLSYPLE--KFHADVSGRSFYNGRFIQRMREKAASRPNVRLEQGTVTSLLEENGTIKGVQYK 766 LA+ L KDGRRVHVIERD+ EP+RI+GE +QPGG L L +LGLEDC+E IDAQ+ G ++KDGK S+P++ F D S RSF+NGRF+QR+R+KA+S PNVRLE+GTV SL+EE G IKGV YK Sbjct: 60 LAYALAKDGRRVHVIERDLREPERIMGEFMQPGGRLMLSKLGLEDCLEGIDAQKATGMTVYKDGKEAVASFPVDNNNFPFDPSARSFHNGRFVQRLRQKASSLPNVRLEEGTVKSLIEEKGVIKGVTYK 188
BLAST of CX671521 vs. ExPASy Swiss-Prot
Match: ERG12_BRANA (Squalene monooxygenase 1,2 OS=Brassica napus GN=SQP1,2 PE=2 SV=1) HSP 1 Score: 163.31 bits (412), Expect = 1.333e-39 Identity = 80/128 (62.50%), Postives = 101/128 (78.91%), Query Frame = 2 Query: 386 LAHTLGKDGRRVHVIERDVTEPDRIVGELLQPGGYLKLVELGLEDCVEEIDAQQVLGYALFKDGKSTRLSYPLE-KFHADVSGRSFYNGRFIQRMREKAASRPNVRLEQGTVTSLLEENGTIKGVQYK 766 LA+ L KDGRRVHVIERD+ EP R++GE +QPGG L L +LGL+DC+EEIDAQ+ G LFKDGK T +P++ F + SGR F+NGRF+QR+R+KA+S PNVRLE+GTV SL+EE G +KGV YK Sbjct: 63 LAYALAKDGRRVHVIERDMREPVRMMGEFMQPGGRLMLSKLGLQDCLEEIDAQKSTGIRLFKDGKETVACFPVDTNFPYEPSGRFFHNGRFVQRLRQKASSLPNVRLEEGTVRSLIEEKGVVKGVTYK 190
BLAST of CX671521 vs. ExPASy Swiss-Prot
Match: ERG12_ARATH (Squalene monooxygenase 1,2 OS=Arabidopsis thaliana GN=SQP1,2 PE=2 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 9.551e-38 Identity = 76/129 (58.91%), Postives = 99/129 (76.74%), Query Frame = 2 Query: 386 LAHTLGKDGRRVHVIERDVTEPDRIVGELLQPGGYLKLVELGLEDCVEEIDAQQVLGYALFKDGKSTRLSYPLE--KFHADVSGRSFYNGRFIQRMREKAASRPNVRLEQGTVTSLLEENGTIKGVQYK 766 LA+ L KDGRRVHVIERD+ EP+R++GE +QPGG L L +LGL+DC+E+IDAQ+ G A++KDGK +P++ F + S RSF+NGRF+Q++R KA S NVRLE+GTV SLLEE G +KGV YK Sbjct: 60 LAYALAKDGRRVHVIERDMREPERMMGEFMQPGGRLMLSKLGLQDCLEDIDAQKATGLAVYKDGKEADAPFPVDNNNFSYEPSARSFHNGRFVQQLRRKAFSLSNVRLEEGTVKSLLEEKGVVKGVTYK 188
BLAST of CX671521 vs. ExPASy Swiss-Prot
Match: ERG11_BRANA (Squalene monooxygenase 1,1 OS=Brassica napus GN=SQP1,1 PE=2 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 3.629e-37 Identity = 90/197 (45.69%), Postives = 117/197 (59.39%), Query Frame = 2 Query: 188 HYIAGTLIXXXXXXXXXXXXNDSKKPRKV---STTYKTQNDVFRSSVNAGKNGSPTDXXXXXXXXXXXXLAHTLGKDGRRVHVIERDVTEPDRIVGELLQPGGYLKLVELGLEDCVEEIDAQQVLGYALFKDGKSTRLSYPLEK-FHADVSGRSFYNGRFIQRMREKAASRPNVRLEQGTVTSLLEENGTIKGVQYK 766 H TL+ N KK K+ +T + D V AG GS LA+ L KDGRRVHVIERD+ EP R++GE +QPGG L L +LGLEDC+E ID Q G A++KDG+ +S+P + F + +GR+FYNGRF+QR+R+KA+S P V+LE+GTV SL+EE G IKGV YK Sbjct: 7 HVCLWTLLAFVLTWTVFYVNNRRKKVAKLPDAATEVRRDGDADVIIVGAGVGGSA--------------LAYALAKDGRRVHVIERDMREPVRMMGEFMQPGGRLLLSKLGLEDCLEGIDEQIATGLAVYKDGQKALVSFPEDNDFPYEPTGRAFYNGRFVQRLRQKASSLPTVQLEEGTVKSLIEEKGVIKGVTYK 189
BLAST of CX671521 vs. ExPASy Swiss-Prot
Match: ERG13_ARATH (Squalene monooxygenase 2 OS=Arabidopsis thaliana GN=SQP2 PE=2 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 2.601e-35 Identity = 74/128 (57.81%), Postives = 94/128 (73.44%), Query Frame = 2 Query: 386 LAHTLGKDGRRVHVIERDVTEPDRIVGELLQPGGYLKLVELGLEDCVEEIDAQQVLGYALFKDGKSTRLSYPLEK-FHADVSGRSFYNGRFIQRMREKAASRPNVRLEQGTVTSLLEENGTIKGVQYK 766 LA+ L KDGRRVHVIERD+ EP R +GEL+Q GG L +LGLEDC+E+IDAQ+ A++KDGK L +P +K F + GR NGR +QR+R+KAAS NV+LE+GTV SL+EE G +KGV YK Sbjct: 58 LAYALAKDGRRVHVIERDLKEPQRFMGELMQAGGRFMLAQLGLEDCLEDIDAQEAKSLAIYKDGKHATLPFPDDKSFPHEPVGRLLRNGRLVQRLRQKAASLSNVQLEEGTVKSLIEEEGVVKGVTYK 185
BLAST of CX671521 vs. ExPASy Swiss-Prot
Match: ERG1_HUMAN (Squalene monooxygenase OS=Homo sapiens GN=SQLE PE=2 SV=2) HSP 1 Score: 124.79 bits (312), Expect = 5.253e-28 Identity = 75/165 (45.45%), Postives = 99/165 (60.00%), Query Frame = 2 Query: 278 TTYKTQNDVFRSSVNAGKNGSPTDXXXXXXXXXXXXLAHTLGKDGRRVHVIERDVTEPDRIVGELLQPGGYLKLVELGLEDCVEEIDAQQVLGYALF-KDGKS-TRLSYPLEKFHADVSGRSFYNGRFIQRMREKAASRPNVRLEQGTVTSLLEENGTIKGVQYK 766 T+ +QND V AG GS L L +DGR+V VIERD+ EPDRIVGE LQPGGY L +LGL D VE +DAQ V GY + ++ KS ++ YPL + + SGR+F++GRFI +R+ A + PN + +G V LLEE+ + GVQYK Sbjct: 116 TSTSSQNDPEVIIVGAGVLGSA--------------LVAVLSRDGRKVTVIERDLKEPDRIVGEFLQPGGYHVLKDLGLGDTVEGLDAQVVNGYMIHDQESKSEVQIPYPLSENNQVQSGRAFHHGRFIMSLRKAAMAEPNAKFIEGVVLQLLEEDDVVMGVQYK 266
BLAST of CX671521 vs. ExPASy Swiss-Prot
Match: ERG1_MOUSE (Squalene monooxygenase OS=Mus musculus GN=Sqle PE=2 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.528e-27 Identity = 64/129 (49.61%), Postives = 87/129 (67.44%), Query Frame = 2 Query: 386 LAHTLGKDGRRVHVIERDVTEPDRIVGELLQPGGYLKLVELGLEDCVEEIDAQQVLGYAL--FKDGKSTRLSYPLEKFHADVSGRSFYNGRFIQRMREKAASRPNVRLEQGTVTSLLEENGTIKGVQYK 766 LA L +DGR+V VIERD+ EPDRIVGELLQPGGY L ELGL D VE ++A + GY + ++ ++ YPL + + SG +F++GRFI +R+ A + PNV+ +G V LLEE+ + GVQYK Sbjct: 136 LAAVLSRDGRKVTVIERDLKEPDRIVGELLQPGGYRVLQELGLGDTVEGLNAHHIHGYIVHDYESRSEVQIPYPLSETNQVQSGIAFHHGRFIMSLRKAAMAEPNVKFIEGVVLQLLEEDDAVIGVQYK 264
BLAST of CX671521 vs. ExPASy Swiss-Prot
Match: ERG1_RAT (Squalene monooxygenase OS=Rattus norvegicus GN=Sqle PE=2 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 3.187e-25 Identity = 60/129 (46.51%), Postives = 84/129 (65.12%), Query Frame = 2 Query: 386 LAHTLGKDGRRVHVIERDVTEPDRIVGELLQPGGYLKLVELGLEDCVEEIDAQQVLGYALF--KDGKSTRLSYPLEKFHADVSGRSFYNGRFIQRMREKAASRPNVRLEQGTVTSLLEENGTIKGVQYK 766 LA L +DGR V VIERD+ EPDRI+GE LQPGGY L ELGL D VE ++A + GY + + ++ YP+ + + SG +F++G+FI +R+ A + PNV+ +G V LLEE+ + GVQYK Sbjct: 137 LATVLSRDGRTVTVIERDLKEPDRILGECLQPGGYRVLRELGLGDTVESLNAHHIHGYVIHDCESRSEVQIPYPVSENNQVQSGVAFHHGKFIMSLRKAAMAEPNVKFIEGVVLRLLEEDDAVIGVQYK 265
BLAST of CX671521 vs. ExPASy Swiss-Prot
Match: ERG1_SCHPO (Probable squalene monooxygenase OS=Schizosaccharomyces pombe GN=SPBC713.12 PE=2 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 3.646e-21 Identity = 53/122 (43.44%), Postives = 73/122 (59.84%), Query Frame = 2 Query: 386 LAHTLGKDGRRVHVIERDVTEPDRIVGELLQPGGYLKLVELGLEDCVEEIDAQQVLGYALFKDGKSTRLSYPLEKFHADVSGRSFYNGRFIQRMREKAASRPNVRLEQGTVTSLL-EENGTI 748 L LG+ GR+V V+ERD++EPDRIVGELLQPGG L ++G+ D VE ID Q GY +F + + YP + G F+ GRF+ +R+ S PNV + + TV LL +E G + Sbjct: 20 LGAALGRQGRKVLVLERDMSEPDRIVGELLQPGGIEALEKIGIADAVEGIDGQWTSGYQIFYGDSNVSVPYPSKPNGGAYQGIGFHYGRFVMNLRKALTSTPNVTVTEATVNELLRDETGEV 141 The following BLAST results are available for this feature:
BLAST of CX671521 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 14
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Sequences
The
following sequences are available for this feature:
EST sequence >CX671521 ID=CX671521; Name=CX671521; organism=Citrus sinensis; type=EST; length=770bpback to top |